RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 RASL11AQ6T310 242 aa5.08□□□□□ -1.6
EPHA4-206ENST00000424339 C1orf158Q8N1D5 194 aa5.08□□□□□ -1.6
EPHA4-206ENST00000424339 DAZAP1Q96EP5 407 aaKnown RBP5.08□□□□□ -1.6
EPHA4-206ENST00000424339 SGK494Q96LW2 274 aa5.08□□□□□ -1.6
EPHA4-206ENST00000424339 NDUFAF3Q9BU61 184 aa5.08□□□□□ -1.6
EPHA4-206ENST00000424339 RNASE7Q9H1E1 156 aaKnown RBP5.08□□□□□ -1.6
EPHA4-206ENST00000424339 DNAH3Q8TD57 4116 aa5.07□□□□□ -1.6
EPHA4-206ENST00000424339 GRIFINA4D1Z8 144 aa5.07□□□□□ -1.6
EPHA4-206ENST00000424339 SNURFLB1AK76 121 aa5.07□□□□□ -1.6
EPHA4-206ENST00000424339 SERF1AO75920 110 aa5.07□□□□□ -1.6
EPHA4-206ENST00000424339 RPS20P60866 119 aaKnown RBP5.07□□□□□ -1.6
EPHA4-206ENST00000424339 LBHQ53QV2 105 aaPredicted RBP5.07□□□□□ -1.6
EPHA4-206ENST00000424339 OR10J3Q5JRS4 329 aa5.07□□□□□ -1.6
EPHA4-206ENST00000424339 LINC00469Q8N7U9 141 aa5.07□□□□□ -1.6
EPHA4-206ENST00000424339 ZC2HC1AQ96GY0 325 aa5.07□□□□□ -1.6
EPHA4-206ENST00000424339 C2orf88Q9BSF0 95 aa5.07□□□□□ -1.6
EPHA4-206ENST00000424339 NAGKQ9UJ70 344 aa5.07□□□□□ -1.6
EPHA4-206ENST00000424339 IGHV3OR16-12A0A075B7B8 117 aa5.06□□□□□ -1.6
EPHA4-206ENST00000424339 CBY3A6NI87 242 aa5.06□□□□□ -1.6
EPHA4-206ENST00000424339 P01737 135 aa5.06□□□□□ -1.6
EPHA4-206ENST00000424339 MGST1P10620 155 aaKnown RBP5.06□□□□□ -1.6
EPHA4-206ENST00000424339 ZNF415Q09FC8 603 aa5.06□□□□□ -1.6
EPHA4-206ENST00000424339 PRR9Q5T870 116 aa5.06□□□□□ -1.6
EPHA4-206ENST00000424339 TEX43Q6ZNM6 134 aa5.06□□□□□ -1.6
EPHA4-206ENST00000424339 Q8NAQ8 132 aa5.06□□□□□ -1.6
EPHA4-206ENST00000424339 IL17DQ8TAD2 202 aa5.06□□□□□ -1.6
EPHA4-206ENST00000424339 RNASE8Q8TDE3 154 aaKnown RBP5.06□□□□□ -1.6
EPHA4-206ENST00000424339 SPXQ9BT56 116 aa5.06□□□□□ -1.6
EPHA4-206ENST00000424339 TIMM8BQ9Y5J9 83 aaPredicted RBP5.06□□□□□ -1.6
EPHA4-206ENST00000424339 U3KQK5 164 aa5.06□□□□□ -1.6
EPHA4-206ENST00000424339 A0A1B0GXF2 115 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 C19orf71A6NCJ1 209 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 LYRM9A8MSI8 78 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 ZNF705GA8MUZ8 300 aaPredicted RBP5.05□□□□□ -1.6
EPHA4-206ENST00000424339 F2Z2F3 143 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 SH2D1AO60880 128 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 ORM1P02763 201 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 RBMY1A1P0DJD3 496 aaKnown RBP5.05□□□□□ -1.6
EPHA4-206ENST00000424339 RBMY1CP0DJD4 496 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 PRB4P10163 310 aaPredicted RBP5.05□□□□□ -1.6
EPHA4-206ENST00000424339 GYPEP15421 78 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 ZNF80P51504 273 aaPredicted RBP5.05□□□□□ -1.6
EPHA4-206ENST00000424339 TCL1AP56279 114 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 DAZ2Q13117 558 aaKnown RBP5.05□□□□□ -1.6
EPHA4-206ENST00000424339 RBMY1FQ15415 496 aaKnown RBP5.05□□□□□ -1.6
EPHA4-206ENST00000424339 LGALS9BQ3B8N2 356 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 PIK3CD-AS1Q5SR53 167 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 PRR27Q6MZM9 219 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 ATP5L2Q7Z4Y8 100 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 MRPL52Q86TS9 123 aaKnown RBP5.05□□□□□ -1.6
EPHA4-206ENST00000424339 Q8N976 141 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 NUDT10Q8NFP7 164 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 NUDT11Q96G61 164 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 NAT8BQ9UHF3 227 aa5.05□□□□□ -1.6
EPHA4-206ENST00000424339 IGHV4-28A0A0C4DH34 117 aa5.04□□□□□ -1.6
EPHA4-206ENST00000424339 FAM231BA6NCW3 169 aa5.04□□□□□ -1.6
EPHA4-206ENST00000424339 SCGB1D1O95968 90 aa5.04□□□□□ -1.6
EPHA4-206ENST00000424339 SPART-AS1P0CW21 52 aa5.04□□□□□ -1.6
EPHA4-206ENST00000424339 HTN1P15515 57 aa5.04□□□□□ -1.6
EPHA4-206ENST00000424339 S100A4P26447 101 aaKnown RBP5.04□□□□□ -1.6
EPHA4-206ENST00000424339 ASIPP42127 132 aa5.04□□□□□ -1.6
EPHA4-206ENST00000424339 CRIP1P50238 77 aa5.04□□□□□ -1.6
EPHA4-206ENST00000424339 MUC21Q5SSG8 566 aa5.04□□□□□ -1.6
EPHA4-206ENST00000424339 MRPL54Q6P161 138 aaKnown RBP5.04□□□□□ -1.6
EPHA4-206ENST00000424339 BAGE3Q86Y29 109 aa5.04□□□□□ -1.6
EPHA4-206ENST00000424339 NHLRC2Q8NBF2 726 aa5.04□□□□□ -1.6
EPHA4-206ENST00000424339 TSKUQ8WUA8 353 aa5.04□□□□□ -1.6
EPHA4-206ENST00000424339 PTH2Q96A98 100 aa5.04□□□□□ -1.6
EPHA4-206ENST00000424339 IGKV3D-20A0A0C4DH25 116 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 IGHV3-16A0A0C4DH30 117 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 A8MWL6 223 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 CIDEAO60543 219 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 APCSP02743 223 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 OR5AL1P0C617 328 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 SRIP30626 198 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 SLAQ13239 276 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 C11orf72Q8NBR9 251 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 NUP35Q8NFH5 326 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 OR2D3Q8NGH3 330 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 C18orf32Q8TCD1 76 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 C18orf15Q96N68 181 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 GFRA4Q9GZZ7 299 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 RPP21Q9H633 154 aaKnown RBP5.03□□□□□ -1.6
EPHA4-206ENST00000424339 RETNQ9HD89 108 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 DKK2Q9UBU2 259 aa5.03□□□□□ -1.6
EPHA4-206ENST00000424339 A0A0J9YWU9 116 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 A0A1B0GV90 55 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 PLAC8L1A1L4L8 177 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 M0R2P5 195 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 SPINK4O60575 86 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 AZU1P20160 251 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 RAB4AP20338 218 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 KIAA1644Q3SXP7 199 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 NIT1Q86X76 327 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 LINC00612Q8N6U2 182 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 C11orf45Q8TAV5 145 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 RASL10AQ92737 203 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 C9orf85Q96MD7 179 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 SAMD10Q9BYL1 202 aa5.02□□□□□ -1.61
EPHA4-206ENST00000424339 EDA2RQ9HAV5 297 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms