RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 A0A1B0GV50 99 aa17.09■□□□□ 0.33
SMDT1-202ENST00000422252 TPT1P13693 172 aaKnown RBP17.09■□□□□ 0.33
SMDT1-202ENST00000422252 Q9UF83 564 aa17.09■□□□□ 0.33
SMDT1-202ENST00000422252 KRTAP10-1P60331 282 aa17.08■□□□□ 0.32
SMDT1-202ENST00000422252 FAM74A4Q5TZK3 123 aa17.08■□□□□ 0.32
SMDT1-202ENST00000422252 SFRP2Q96HF1 295 aa17.08■□□□□ 0.32
SMDT1-202ENST00000422252 LRCOL1A6NCL2 159 aa17.07■□□□□ 0.32
SMDT1-202ENST00000422252 S100A9P06702 114 aaKnown RBP17.07■□□□□ 0.32
SMDT1-202ENST00000422252 LAGE3Q14657 143 aa17.07■□□□□ 0.32
SMDT1-202ENST00000422252 M0R381 172 aa17.06■□□□□ 0.32
SMDT1-202ENST00000422252 PFDN1O60925 122 aa17.06■□□□□ 0.32
SMDT1-202ENST00000422252 EIF5AP63241 154 aaKnown RBP17.06■□□□□ 0.32
SMDT1-202ENST00000422252 ZFP82Q8N141 532 aa17.06■□□□□ 0.32
SMDT1-202ENST00000422252 A0A087WWC5 75 aa17.05■□□□□ 0.32
SMDT1-202ENST00000422252 A0A087WWL8 130 aa17.05■□□□□ 0.32
SMDT1-202ENST00000422252 SCO2A0A1W2PP80 73 aa17.05■□□□□ 0.32
SMDT1-202ENST00000422252 GCSHP23434 173 aa17.05■□□□□ 0.32
SMDT1-202ENST00000422252 XGP55808 180 aa17.05■□□□□ 0.32
SMDT1-202ENST00000422252 Q8N3U1 123 aa17.05■□□□□ 0.32
SMDT1-202ENST00000422252 H2AFB1P0C5Y9 115 aa17.04■□□□□ 0.32
SMDT1-202ENST00000422252 NTN5Q8WTR8 489 aaPredicted RBP17.03■□□□□ 0.32
SMDT1-202ENST00000422252 IGLV5-52A0A0A0MRZ9 124 aa17.02■□□□□ 0.32
SMDT1-202ENST00000422252 TMUB2Q71RG4 321 aa17.02■□□□□ 0.32
SMDT1-202ENST00000422252 BAGE2Q86Y30 109 aa17.02■□□□□ 0.32
SMDT1-202ENST00000422252 MLST8Q9BVC4 326 aa17.02■□□□□ 0.32
SMDT1-202ENST00000422252 TM2D2Q9BX73 214 aa17.02■□□□□ 0.32
SMDT1-202ENST00000422252 Q8N814 137 aa17.01■□□□□ 0.31
SMDT1-202ENST00000422252 EPM2AB3EWF7 344 aa17■□□□□ 0.31
SMDT1-202ENST00000422252 TRAV8-3A0A0A6YYJ7 113 aa16.99■□□□□ 0.31
SMDT1-202ENST00000422252 CXCL1P09341 107 aa16.99■□□□□ 0.31
SMDT1-202ENST00000422252 RPL19P84098 196 aaKnown RBP16.99■□□□□ 0.31
SMDT1-202ENST00000422252 TOR2AQ5JU69 321 aa16.99■□□□□ 0.31
SMDT1-202ENST00000422252 DAZ4Q86SG3 579 aaKnown RBP16.99■□□□□ 0.31
SMDT1-202ENST00000422252 DAZ3Q9NR90 486 aaKnown RBP16.99■□□□□ 0.31
SMDT1-202ENST00000422252 TRBV10-1A0A0K0K1A3 114 aa16.98■□□□□ 0.31
SMDT1-202ENST00000422252 RPL36AP83881 106 aaKnown RBP16.96■□□□□ 0.31
SMDT1-202ENST00000422252 PRR27Q6MZM9 219 aa16.96■□□□□ 0.31
SMDT1-202ENST00000422252 OR10AG1Q8NH19 301 aa16.96■□□□□ 0.31
SMDT1-202ENST00000422252 RPL36ALQ969Q0 106 aaKnown RBP16.96■□□□□ 0.31
SMDT1-202ENST00000422252 MANBALQ9NQG1 85 aa16.96■□□□□ 0.31
SMDT1-202ENST00000422252 URGCP-MRPS24S4R325 110 aa16.96■□□□□ 0.31
SMDT1-202ENST00000422252 NIT1Q86X76 327 aa16.95■□□□□ 0.3
SMDT1-202ENST00000422252 TRBV7-3A0A075B6L6 115 aa16.94■□□□□ 0.3
SMDT1-202ENST00000422252 SNAI2O43623 268 aa16.94■□□□□ 0.3
SMDT1-202ENST00000422252 RPL35P42766 123 aaKnown RBP16.94■□□□□ 0.3
SMDT1-202ENST00000422252 RAB4BP61018 213 aa16.94■□□□□ 0.3
SMDT1-202ENST00000422252 UBE2D3P61077 147 aa16.94■□□□□ 0.3
SMDT1-202ENST00000422252 UBE2D2P62837 147 aa16.94■□□□□ 0.3
SMDT1-202ENST00000422252 CCL20P78556 96 aa16.94■□□□□ 0.3
SMDT1-202ENST00000422252 SSBP4Q9BWG4 385 aaPredicted RBP16.94■□□□□ 0.3
SMDT1-202ENST00000422252 GNG13Q9P2W3 67 aa16.94■□□□□ 0.3
SMDT1-202ENST00000422252 TRAV1-1A0A0B4J248 108 aa16.93■□□□□ 0.3
SMDT1-202ENST00000422252 OR5AL1P0C617 328 aa16.93■□□□□ 0.3
SMDT1-202ENST00000422252 RAB5CP51148 216 aa16.93■□□□□ 0.3
SMDT1-202ENST00000422252 OR10G8Q8NGN5 311 aa16.93■□□□□ 0.3
SMDT1-202ENST00000422252 WFDC2Q14508 124 aa16.92■□□□□ 0.3
SMDT1-202ENST00000422252 ZNF56Q15929 161 aa16.92■□□□□ 0.3
SMDT1-202ENST00000422252 C11orf52Q96A22 123 aa16.92■□□□□ 0.3
SMDT1-202ENST00000422252 COX11Q9Y6N1 276 aa16.92■□□□□ 0.3
SMDT1-202ENST00000422252 SPANXN1Q5VSR9 72 aa16.91■□□□□ 0.3
SMDT1-202ENST00000422252 EIF5AL1Q6IS14 154 aaKnown RBP16.91■□□□□ 0.3
SMDT1-202ENST00000422252 FRZBQ92765 325 aa16.91■□□□□ 0.3
SMDT1-202ENST00000422252 TMEM70Q9BUB7 260 aa16.91■□□□□ 0.3
SMDT1-202ENST00000422252 DERL1Q9BUN8 251 aa16.91■□□□□ 0.3
SMDT1-202ENST00000422252 MUC21A0A0G2JKD1 596 aa16.9■□□□□ 0.3
SMDT1-202ENST00000422252 MUC21A0A140T8X8 626 aa16.9■□□□□ 0.3
SMDT1-202ENST00000422252 Q5VSD8 79 aa16.9■□□□□ 0.3
SMDT1-202ENST00000422252 RMI2Q96E14 147 aa16.9■□□□□ 0.3
SMDT1-202ENST00000422252 CHCHD7Q9BUK0 85 aa16.9■□□□□ 0.3
SMDT1-202ENST00000422252 FAT1Q14517 4588 aa16.89■□□□□ 0.3
SMDT1-202ENST00000422252 A0A087WX48 190 aa16.89■□□□□ 0.29
SMDT1-202ENST00000422252 TEX46H3BTG2 121 aa16.89■□□□□ 0.29
SMDT1-202ENST00000422252 KCNIP4Q6PIL6 250 aa16.89■□□□□ 0.29
SMDT1-202ENST00000422252 NEXN-AS1Q8NBZ9 246 aa16.89■□□□□ 0.29
SMDT1-202ENST00000422252 KLK12Q9UKR0 248 aa16.88■□□□□ 0.29
SMDT1-202ENST00000422252 LECT2O14960 151 aa16.87■□□□□ 0.29
SMDT1-202ENST00000422252 SMR3BP02814 79 aaPredicted RBP16.87■□□□□ 0.29
SMDT1-202ENST00000422252 SULT1A2P50226 295 aa16.87■□□□□ 0.29
SMDT1-202ENST00000422252 ELOBQ15370 118 aa16.87■□□□□ 0.29
SMDT1-202ENST00000422252 CENPWQ5EE01 88 aa16.87■□□□□ 0.29
SMDT1-202ENST00000422252 SSTP61278 116 aa16.86■□□□□ 0.29
SMDT1-202ENST00000422252 HAMPP81172 84 aa16.86■□□□□ 0.29
SMDT1-202ENST00000422252 TCTE3Q8IZS6 198 aa16.86■□□□□ 0.29
SMDT1-202ENST00000422252 DNAJC30Q96LL9 226 aa16.86■□□□□ 0.29
SMDT1-202ENST00000422252 IGKV2D-24A0A075B6R9 120 aa16.85■□□□□ 0.29
SMDT1-202ENST00000422252 TRBV6-8A0A0A6YYG3 113 aa16.85■□□□□ 0.29
SMDT1-202ENST00000422252 F5H697 171 aa16.85■□□□□ 0.29
SMDT1-202ENST00000422252 IGLV2-8P01709 118 aa16.85■□□□□ 0.29
SMDT1-202ENST00000422252 BAALCQ8WXS3 180 aa16.85■□□□□ 0.29
SMDT1-202ENST00000422252 VPS13BQ7Z7G8 4022 aa16.85■□□□□ 0.29
SMDT1-202ENST00000422252 C1QBP02746 253 aa16.84■□□□□ 0.29
SMDT1-202ENST00000422252 SMIM17P0DL12 118 aa16.84■□□□□ 0.29
SMDT1-202ENST00000422252 INAFM2P0DMQ5 153 aa16.84■□□□□ 0.29
SMDT1-202ENST00000422252 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.84■□□□□ 0.29
SMDT1-202ENST00000422252 UBE2WQ96B02 151 aa16.84■□□□□ 0.29
SMDT1-202ENST00000422252 DAZAP1Q96EP5 407 aaKnown RBP16.84■□□□□ 0.29
SMDT1-202ENST00000422252 AP1S3Q96PC3 154 aa16.84■□□□□ 0.29
SMDT1-202ENST00000422252 TMEM262E9PQX1 116 aa16.83■□□□□ 0.28
SMDT1-202ENST00000422252 MEF2BQ02080 365 aaPredicted RBP16.83■□□□□ 0.28
SMDT1-202ENST00000422252 SMIM12Q96EX1 92 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms