RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 CTXND1A0A1B0GTU2 59 aa12.18□□□□□ -0.46
AC004540.1-203ENST00000421862 CRIP1P50238 77 aa12.18□□□□□ -0.46
AC004540.1-203ENST00000421862 SYT8Q8NBV8 401 aa12.18□□□□□ -0.46
AC004540.1-203ENST00000421862 CHAC1Q9BUX1 264 aa12.18□□□□□ -0.46
AC004540.1-203ENST00000421862 URGCP-MRPS24S4R325 110 aa12.18□□□□□ -0.46
AC004540.1-203ENST00000421862 IGKV2D-24A0A075B6R9 120 aa12.17□□□□□ -0.46
AC004540.1-203ENST00000421862 ARMS2P0C7Q2 107 aa12.17□□□□□ -0.46
AC004540.1-203ENST00000421862 OR11H4Q8NGC9 324 aa12.17□□□□□ -0.46
AC004540.1-203ENST00000421862 HIST1H2BAQ96A08 127 aa12.17□□□□□ -0.46
AC004540.1-203ENST00000421862 SFRP2Q96HF1 295 aa12.17□□□□□ -0.46
AC004540.1-203ENST00000421862 KLK12Q9UKR0 248 aa12.17□□□□□ -0.46
AC004540.1-203ENST00000421862 TRBV10-1A0A0K0K1A3 114 aa12.16□□□□□ -0.46
AC004540.1-203ENST00000421862 RBFOX3A6NFN3 312 aa12.16□□□□□ -0.46
AC004540.1-203ENST00000421862 FAM74A7A6NL05 159 aa12.16□□□□□ -0.46
AC004540.1-203ENST00000421862 SH2D1AO60880 128 aa12.16□□□□□ -0.46
AC004540.1-203ENST00000421862 FAM74A4Q5TZK3 123 aa12.16□□□□□ -0.46
AC004540.1-203ENST00000421862 RPL7L1Q6DKI1 246 aaKnown RBP12.16□□□□□ -0.46
AC004540.1-203ENST00000421862 NKX6-2Q9C056 277 aaPredicted RBP12.16□□□□□ -0.46
AC004540.1-203ENST00000421862 M0R036 132 aa12.15□□□□□ -0.46
AC004540.1-203ENST00000421862 IFNA7P01567 189 aa12.15□□□□□ -0.46
AC004540.1-203ENST00000421862 UBE2G2P60604 165 aa12.15□□□□□ -0.46
AC004540.1-203ENST00000421862 LINC01559Q495D7 138 aa12.15□□□□□ -0.46
AC004540.1-203ENST00000421862 Q5BKY6 102 aa12.15□□□□□ -0.46
AC004540.1-203ENST00000421862 CIRBP-AS1Q8TBR5 109 aa12.15□□□□□ -0.46
AC004540.1-203ENST00000421862 ZFP30Q9Y2G7 519 aa12.15□□□□□ -0.46
AC004540.1-203ENST00000421862 A0A087WWL8 130 aa12.14□□□□□ -0.47
AC004540.1-203ENST00000421862 UBE2D3P61077 147 aa12.14□□□□□ -0.47
AC004540.1-203ENST00000421862 UBE2D2P62837 147 aa12.14□□□□□ -0.47
AC004540.1-203ENST00000421862 ZNF674Q2M3X9 581 aa12.14□□□□□ -0.47
AC004540.1-203ENST00000421862 FAM162BQ5T6X4 162 aa12.14□□□□□ -0.47
AC004540.1-203ENST00000421862 UBE2WQ96B02 151 aa12.14□□□□□ -0.47
AC004540.1-203ENST00000421862 TRBV6-1A0A0K0K1D8 114 aa12.13□□□□□ -0.47
AC004540.1-203ENST00000421862 GRIFINA4D1Z8 144 aa12.13□□□□□ -0.47
AC004540.1-203ENST00000421862 IGLV2-8P01709 118 aa12.13□□□□□ -0.47
AC004540.1-203ENST00000421862 ELOBQ15370 118 aa12.13□□□□□ -0.47
AC004540.1-203ENST00000421862 OR10G8Q8NGN5 311 aa12.13□□□□□ -0.47
AC004540.1-203ENST00000421862 FMC1Q96HJ9 113 aa12.13□□□□□ -0.47
AC004540.1-203ENST00000421862 PHLDA3Q9Y5J5 127 aa12.13□□□□□ -0.47
AC004540.1-203ENST00000421862 TRBV7-3A0A075B6L6 115 aa12.12□□□□□ -0.47
AC004540.1-203ENST00000421862 A0A087WX48 190 aa12.12□□□□□ -0.47
AC004540.1-203ENST00000421862 GIPP09681 153 aaPredicted RBP12.12□□□□□ -0.47
AC004540.1-203ENST00000421862 TPT1P13693 172 aaKnown RBP12.12□□□□□ -0.47
AC004540.1-203ENST00000421862 ZFP82Q8N141 532 aa12.12□□□□□ -0.47
AC004540.1-203ENST00000421862 MED28Q9H204 178 aa12.12□□□□□ -0.47
AC004540.1-203ENST00000421862 BORCS7-ASMTA0A0B4J1R7 106 aa12.11□□□□□ -0.47
AC004540.1-203ENST00000421862 M0R381 172 aa12.11□□□□□ -0.47
AC004540.1-203ENST00000421862 PTTG1O95997 202 aa12.11□□□□□ -0.47
AC004540.1-203ENST00000421862 OXTP01178 125 aa12.11□□□□□ -0.47
AC004540.1-203ENST00000421862 LTAP01374 205 aa12.11□□□□□ -0.47
AC004540.1-203ENST00000421862 RPL36AP83881 106 aaKnown RBP12.11□□□□□ -0.47
AC004540.1-203ENST00000421862 Q0VG73 95 aa12.11□□□□□ -0.47
AC004540.1-203ENST00000421862 RPL36ALQ969Q0 106 aaKnown RBP12.11□□□□□ -0.47
AC004540.1-203ENST00000421862 TCEAL7Q9BRU2 100 aa12.11□□□□□ -0.47
AC004540.1-203ENST00000421862 BATF3Q9NR55 127 aa12.11□□□□□ -0.47
AC004540.1-203ENST00000421862 SERTAD4-AS1Q5TG53 156 aa12.1□□□□□ -0.47
AC004540.1-203ENST00000421862 INO80EQ8NBZ0 244 aaPredicted RBP12.1□□□□□ -0.47
AC004540.1-203ENST00000421862 FHITP49789 147 aa12.09□□□□□ -0.47
AC004540.1-203ENST00000421862 UBE2G1P62253 170 aa12.09□□□□□ -0.47
AC004540.1-203ENST00000421862 C14orf177Q52M58 125 aa12.09□□□□□ -0.47
AC004540.1-203ENST00000421862 ENHOQ6UWT2 76 aa12.09□□□□□ -0.47
AC004540.1-203ENST00000421862 TRBV6-8A0A0A6YYG3 113 aa12.08□□□□□ -0.48
AC004540.1-203ENST00000421862 MAP1LC3B2A6NCE7 125 aa12.08□□□□□ -0.48
AC004540.1-203ENST00000421862 AKR1C8PQ5T2L2 129 aa12.08□□□□□ -0.48
AC004540.1-203ENST00000421862 PRR27Q6MZM9 219 aa12.08□□□□□ -0.48
AC004540.1-203ENST00000421862 KCNIP4Q6PIL6 250 aa12.08□□□□□ -0.48
AC004540.1-203ENST00000421862 C1orf43Q9BWL3 253 aa12.08□□□□□ -0.48
AC004540.1-203ENST00000421862 MAP1LC3BQ9GZQ8 125 aa12.08□□□□□ -0.48
AC004540.1-203ENST00000421862 FXYD6-FXYD2A0A087WZ82 144 aa12.07□□□□□ -0.48
AC004540.1-203ENST00000421862 TMSB15BA0A087X1C1 80 aa12.07□□□□□ -0.48
AC004540.1-203ENST00000421862 CXCL1P09341 107 aa12.07□□□□□ -0.48
AC004540.1-203ENST00000421862 MPV17L2Q567V2 206 aa12.07□□□□□ -0.48
AC004540.1-203ENST00000421862 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
AC004540.1-203ENST00000421862 G3V3Q6 166 aa12.06□□□□□ -0.48
AC004540.1-203ENST00000421862 RAB4BP61018 213 aa12.06□□□□□ -0.48
AC004540.1-203ENST00000421862 CRPP02741 224 aa12.05□□□□□ -0.48
AC004540.1-203ENST00000421862 UBR4Q5T4S7 5183 aa12.04□□□□□ -0.48
AC004540.1-203ENST00000421862 AKR1C3P42330 323 aa12.04□□□□□ -0.48
AC004540.1-203ENST00000421862 C15orf54Q8N8G6 183 aa12.04□□□□□ -0.48
AC004540.1-203ENST00000421862 OR10AG1Q8NH19 301 aa12.04□□□□□ -0.48
AC004540.1-203ENST00000421862 USP17L23D6RBM5 183 aa12.03□□□□□ -0.48
AC004540.1-203ENST00000421862 SNAI2O43623 268 aa12.03□□□□□ -0.48
AC004540.1-203ENST00000421862 PKIAP61925 76 aa12.03□□□□□ -0.48
AC004540.1-203ENST00000421862 ZNF56Q15929 161 aa12.03□□□□□ -0.48
AC004540.1-203ENST00000421862 MIAQ16674 131 aa12.03□□□□□ -0.48
AC004540.1-203ENST00000421862 CYTL1Q9NRR1 136 aa12.03□□□□□ -0.48
AC004540.1-203ENST00000421862 PRR34Q9NV39 138 aa12.03□□□□□ -0.48
AC004540.1-203ENST00000421862 VAX2Q9UIW0 290 aa12.03□□□□□ -0.48
AC004540.1-203ENST00000421862 RPL19P84098 196 aaKnown RBP12.02□□□□□ -0.49
AC004540.1-203ENST00000421862 MLST8Q9BVC4 326 aa12.02□□□□□ -0.49
AC004540.1-203ENST00000421862 SSBP4Q9BWG4 385 aaPredicted RBP12.02□□□□□ -0.49
AC004540.1-203ENST00000421862 TMEM262E9PQX1 116 aa12.01□□□□□ -0.49
AC004540.1-203ENST00000421862 HLA-DQA1P01909 254 aa12.01□□□□□ -0.49
AC004540.1-203ENST00000421862 ANGP03950 147 aaKnown RBP12.01□□□□□ -0.49
AC004540.1-203ENST00000421862 RPL37AP61513 92 aaKnown RBP12.01□□□□□ -0.49
AC004540.1-203ENST00000421862 CST9LP1Q5W188 147 aa12.01□□□□□ -0.49
AC004540.1-203ENST00000421862 KRTAP26-1Q6PEX3 210 aa12.01□□□□□ -0.49
AC004540.1-203ENST00000421862 PRSS1P07477 247 aa12□□□□□ -0.49
AC004540.1-203ENST00000421862 OR5AL1P0C617 328 aa12□□□□□ -0.49
AC004540.1-203ENST00000421862 HNRNPA3P51991 378 aaKnown RBP12□□□□□ -0.49
AC004540.1-203ENST00000421862 DGAT2L7PQ6IED9 249 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms