RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 SNAI2O43623 268 aa12.52□□□□□ -0.41
ECHDC3-202ENST00000420401 CEBPGP53567 150 aa12.52□□□□□ -0.41
ECHDC3-202ENST00000420401 SOHLH1Q5JUK2 328 aa12.52□□□□□ -0.41
ECHDC3-202ENST00000420401 UFSP1Q6NVU6 142 aa12.52□□□□□ -0.41
ECHDC3-202ENST00000420401 OCC1Q8TAD7 63 aa12.52□□□□□ -0.41
ECHDC3-202ENST00000420401 NXPH4O95158 308 aa12.51□□□□□ -0.41
ECHDC3-202ENST00000420401 TTC32Q5I0X7 151 aa12.51□□□□□ -0.41
ECHDC3-202ENST00000420401 FAM74A4Q5TZK3 123 aa12.51□□□□□ -0.41
ECHDC3-202ENST00000420401 SPANXN1Q5VSR9 72 aa12.51□□□□□ -0.41
ECHDC3-202ENST00000420401 OR10AG1Q8NH19 301 aa12.51□□□□□ -0.41
ECHDC3-202ENST00000420401 A0A087WWL8 130 aa12.5□□□□□ -0.41
ECHDC3-202ENST00000420401 C1orf134Q5TEV5 83 aa12.5□□□□□ -0.41
ECHDC3-202ENST00000420401 Q6ZSN1 163 aa12.5□□□□□ -0.41
ECHDC3-202ENST00000420401 SIVA1O15304 175 aa12.49□□□□□ -0.41
ECHDC3-202ENST00000420401 CRYGDP07320 174 aa12.49□□□□□ -0.41
ECHDC3-202ENST00000420401 FER1L6-AS1Q8NA97 138 aa12.49□□□□□ -0.41
ECHDC3-202ENST00000420401 NUDT10Q8NFP7 164 aa12.49□□□□□ -0.41
ECHDC3-202ENST00000420401 NUDT11Q96G61 164 aa12.49□□□□□ -0.41
ECHDC3-202ENST00000420401 TPPP3Q9BW30 176 aa12.49□□□□□ -0.41
ECHDC3-202ENST00000420401 MUC21A0A0G2JKD1 596 aa12.48□□□□□ -0.41
ECHDC3-202ENST00000420401 MUC21A0A140T8X8 626 aa12.48□□□□□ -0.41
ECHDC3-202ENST00000420401 A0A1W2PPQ1 181 aa12.48□□□□□ -0.41
ECHDC3-202ENST00000420401 K7EN84 100 aa12.48□□□□□ -0.41
ECHDC3-202ENST00000420401 RTL8CO15255 209 aa12.48□□□□□ -0.41
ECHDC3-202ENST00000420401 IGLC6P0CF74 106 aa12.48□□□□□ -0.41
ECHDC3-202ENST00000420401 GZMBP10144 247 aa12.48□□□□□ -0.41
ECHDC3-202ENST00000420401 TIRAPP58753 221 aa12.48□□□□□ -0.41
ECHDC3-202ENST00000420401 LY96Q9Y6Y9 160 aa12.48□□□□□ -0.41
ECHDC3-202ENST00000420401 PKD1P98161 4303 aa12.48□□□□□ -0.41
ECHDC3-202ENST00000420401 F2Z2F3 143 aa12.47□□□□□ -0.41
ECHDC3-202ENST00000420401 SRP19P09132 144 aaKnown RBP12.47□□□□□ -0.41
ECHDC3-202ENST00000420401 SSTP61278 116 aa12.47□□□□□ -0.41
ECHDC3-202ENST00000420401 CACNG7P62955 275 aa12.47□□□□□ -0.41
ECHDC3-202ENST00000420401 SMIM7Q9BQ49 75 aa12.47□□□□□ -0.41
ECHDC3-202ENST00000420401 KRTAP4-5Q9BYR2 181 aa12.47□□□□□ -0.41
ECHDC3-202ENST00000420401 RNASE7Q9H1E1 156 aaKnown RBP12.47□□□□□ -0.41
ECHDC3-202ENST00000420401 RPP21Q9H633 154 aaKnown RBP12.47□□□□□ -0.41
ECHDC3-202ENST00000420401 DYNC1H1Q14204 4646 aaKnown RBP12.46□□□□□ -0.41
ECHDC3-202ENST00000420401 ZNF727A8MUV8 499 aa12.46□□□□□ -0.41
ECHDC3-202ENST00000420401 SMIM17P0DL12 118 aa12.46□□□□□ -0.41
ECHDC3-202ENST00000420401 PEA15Q15121 130 aa12.46□□□□□ -0.41
ECHDC3-202ENST00000420401 C14orf178Q8N769 122 aaPredicted RBP12.46□□□□□ -0.41
ECHDC3-202ENST00000420401 ATP6V0E2Q8NHE4 81 aa12.46□□□□□ -0.41
ECHDC3-202ENST00000420401 DNAH11Q96DT5 4516 aa12.45□□□□□ -0.42
ECHDC3-202ENST00000420401 GAGE12JA6NER3 117 aa12.45□□□□□ -0.42
ECHDC3-202ENST00000420401 RAB4BP61018 213 aa12.45□□□□□ -0.42
ECHDC3-202ENST00000420401 GAGE1Q13065 139 aa12.45□□□□□ -0.42
ECHDC3-202ENST00000420401 GAGE4Q13068 117 aa12.45□□□□□ -0.42
ECHDC3-202ENST00000420401 GAGE5Q13069 117 aa12.45□□□□□ -0.42
ECHDC3-202ENST00000420401 GAGE13Q4V321 117 aa12.45□□□□□ -0.42
ECHDC3-202ENST00000420401 C6orf223Q8N319 242 aa12.45□□□□□ -0.42
ECHDC3-202ENST00000420401 AP1S3Q96PC3 154 aa12.45□□□□□ -0.42
ECHDC3-202ENST00000420401 SMDT1Q9H4I9 107 aa12.45□□□□□ -0.42
ECHDC3-202ENST00000420401 TRAV9-2A0A087WT02 112 aa12.44□□□□□ -0.42
ECHDC3-202ENST00000420401 FAM74A3Q4VXF1 159 aa12.44□□□□□ -0.42
ECHDC3-202ENST00000420401 FAM231DQ6ZW35 169 aa12.44□□□□□ -0.42
ECHDC3-202ENST00000420401 GTSF1LQ9H1H1 148 aa12.44□□□□□ -0.42
ECHDC3-202ENST00000420401 TRAV8-6A0A0B4J262 113 aa12.43□□□□□ -0.42
ECHDC3-202ENST00000420401 TRBV10-1A0A0K0K1A3 114 aa12.43□□□□□ -0.42
ECHDC3-202ENST00000420401 GATCO43716 136 aaKnown RBP12.43□□□□□ -0.42
ECHDC3-202ENST00000420401 BTF3P20290 206 aaKnown RBP12.43□□□□□ -0.42
ECHDC3-202ENST00000420401 ERVFC1-1P60608 527 aa12.43□□□□□ -0.42
ECHDC3-202ENST00000420401 RAB14P61106 215 aa12.43□□□□□ -0.42
ECHDC3-202ENST00000420401 ZNF56Q15929 161 aa12.43□□□□□ -0.42
ECHDC3-202ENST00000420401 LYZL1Q6UWQ5 148 aa12.43□□□□□ -0.42
ECHDC3-202ENST00000420401 F5H697 171 aa12.42□□□□□ -0.42
ECHDC3-202ENST00000420401 K7EP13 123 aa12.42□□□□□ -0.42
ECHDC3-202ENST00000420401 LINC00694P0DN24 101 aa12.42□□□□□ -0.42
ECHDC3-202ENST00000420401 WDR73Q6P4I2 378 aa12.42□□□□□ -0.42
ECHDC3-202ENST00000420401 LINC01551Q86U37 167 aa12.42□□□□□ -0.42
ECHDC3-202ENST00000420401 EVI2AP22794 236 aa12.41□□□□□ -0.42
ECHDC3-202ENST00000420401 TMEM241Q24JQ0 296 aa12.41□□□□□ -0.42
ECHDC3-202ENST00000420401 OR10J3Q5JRS4 329 aa12.41□□□□□ -0.42
ECHDC3-202ENST00000420401 LELP1Q5T871 98 aa12.41□□□□□ -0.42
ECHDC3-202ENST00000420401 WFDC10BQ8IUB3 73 aa12.41□□□□□ -0.42
ECHDC3-202ENST00000420401 KRTAP1-5Q9BYS1 174 aa12.41□□□□□ -0.42
ECHDC3-202ENST00000420401 Q9UF83 564 aa12.41□□□□□ -0.42
ECHDC3-202ENST00000420401 A8MWL6 223 aa12.4□□□□□ -0.42
ECHDC3-202ENST00000420401 TRGC1P0CF51 173 aa12.4□□□□□ -0.42
ECHDC3-202ENST00000420401 DNAH10OSP0CZ25 163 aa12.4□□□□□ -0.42
ECHDC3-202ENST00000420401 CTRLP40313 264 aa12.4□□□□□ -0.42
ECHDC3-202ENST00000420401 RPL36AP83881 106 aaKnown RBP12.4□□□□□ -0.42
ECHDC3-202ENST00000420401 RPL36ALQ969Q0 106 aaKnown RBP12.4□□□□□ -0.42
ECHDC3-202ENST00000420401 MSRB1Q9NZV6 116 aa12.4□□□□□ -0.42
ECHDC3-202ENST00000420401 KIF25-AS1Q9Y6Z4 181 aa12.4□□□□□ -0.42
ECHDC3-202ENST00000420401 A0A087WWC5 75 aa12.39□□□□□ -0.43
ECHDC3-202ENST00000420401 C9JQL5 133 aa12.39□□□□□ -0.43
ECHDC3-202ENST00000420401 NTF3P20783 257 aa12.39□□□□□ -0.43
ECHDC3-202ENST00000420401 SRSF3P84103 164 aaKnown RBP12.39□□□□□ -0.43
ECHDC3-202ENST00000420401 CT83Q5H943 113 aa12.39□□□□□ -0.43
ECHDC3-202ENST00000420401 TRBV7-3A0A075B6L6 115 aa12.38□□□□□ -0.43
ECHDC3-202ENST00000420401 IGHV3-38A0A0C4DH36 116 aa12.38□□□□□ -0.43
ECHDC3-202ENST00000420401 TWIST1Q15672 202 aa12.38□□□□□ -0.43
ECHDC3-202ENST00000420401 C15orf54Q8N8G6 183 aa12.38□□□□□ -0.43
ECHDC3-202ENST00000420401 OR10G8Q8NGN5 311 aa12.38□□□□□ -0.43
ECHDC3-202ENST00000420401 GTSF1Q8WW33 167 aa12.38□□□□□ -0.43
ECHDC3-202ENST00000420401 CNFNQ9BYD5 112 aa12.38□□□□□ -0.43
ECHDC3-202ENST00000420401 OSTCQ9NRP0 149 aa12.38□□□□□ -0.43
ECHDC3-202ENST00000420401 NAT8Q9UHE5 227 aa12.38□□□□□ -0.43
ECHDC3-202ENST00000420401 MGPP08493 103 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms