RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 S100A1P23297 94 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 C1orf137Q5JT78 98 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 IZUMO2Q6UXV1 221 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 LINC00299Q6ZSB3 139 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 ZNF833PQ6ZTB9 187 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 FP248Q71RG6 208 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 C15orf53Q8NAA6 179 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 OR10AC1Q8NH08 325 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 C1orf54Q8WWF1 131 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 MUCL1Q96DR8 90 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 Q96M85 177 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 SLC35B3Q9H1N7 401 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 CST9LQ9H4G1 147 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 ZNF831Q5JPB2 1677 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 DOCK10Q96BY6 2186 aa1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 DIDO1Q9BTC0 2240 aaKnown RBP1.31□□□□□ -2.2
HMGB1P49-201ENST00000418882 HEATR5BQ9P2D3 2071 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 ROBO1Q9Y6N7 1651 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 NRXN2Q9P2S2 1712 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 STRCP1A6NGW2 1772 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 LOC107984156A0A0G2JMH3 177 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 TPST1O60507 370 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 NCR2O95944 276 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 ZNF25P17030 456 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 PCBD1P61457 104 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 PLGLB1Q02325 96 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 MIR22HGQ0VDD5 57 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 ELOBQ15370 118 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 FOXI2Q6ZQN5 318 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 ARL17AQ8IVW1 177 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 OR5AS1Q8N127 324 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 C10orf111Q8N326 155 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 TMEM254Q8TBM7 123 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 DPH3Q96FX2 82 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 CST11Q9H112 138 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 Q9H521 79 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 METTL1Q9UBP6 276 aaKnown RBP1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 TSC2P49815 1807 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 TRPM7Q96QT4 1865 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 PLIN4Q96Q06 1357 aa1.3□□□□□ -2.2
HMGB1P49-201ENST00000418882 QSER1Q2KHR3 1735 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 ABCA3Q99758 1704 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 COL14A1Q05707 1796 aaKnown RBP1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 PARP14Q460N5 1801 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 PDCD11Q14690 1871 aaKnown RBP1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 KMT2BQ9UMN6 2715 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 TRBV20-1A0A075B6N2 111 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 A0A0G2JND7 137 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 C3orf85A0A1B0GTC6 90 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 LOC107986453A0A1B0GWG9 222 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 ATP6V1G2-DDX39BF2Z307 99 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 CCDC179H3BU77 68 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 ERC2-IT1O76042 136 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 CIRBPQ14011 172 aaKnown RBP1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 MIC13Q5XKP0 118 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 OR5AK2Q8NH90 309 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 COL4A1P02462 1669 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 BTAF1O14981 1849 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 PLXNB2O15031 1838 aa1.29□□□□□ -2.2
HMGB1P49-201ENST00000418882 ANKRD36A6QL64 1941 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 A0A087WXM4 84 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 TRAV14DV4A0A0A6YYC5 116 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 TRBV6-8A0A0A6YYG3 113 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 A0A0G2JMM0 328 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 A0A1W2PPB8 328 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 TCRBV3S1A0A5B6 114 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 KIR3DP1A8MWS1 328 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 IFNGP01579 166 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 HIST1H1BP16401 226 aaKnown RBP1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 CKS2P33552 79 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 SNRPFP62306 86 aaKnown RBP1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 OCIAD2Q56VL3 154 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 ZNF720Q7Z2F6 126 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 COA5Q86WW8 74 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 C4orf33Q8N1A6 199 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 AP4S1Q9Y587 144 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 MPC1Q9Y5U8 109 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 SOX21Q9Y651 276 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 LY75O60449 1722 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 ZNF236Q9UL36 1845 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 MCM3APO60318 1980 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 RP1P56715 2156 aa1.28□□□□□ -2.2
HMGB1P49-201ENST00000418882 PTPRDP23468 1912 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 ANAPC1Q9H1A4 1944 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 A0A0G2JMZ2 1700 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 LRRC37A2A6NM11 1700 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 LRRC37AA6NMS7 1700 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 IGHV1-24A0A0C4DH33 117 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 FAM25AB3EWG3 89 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 FAM25CB3EWG5 89 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 FAM25GB3EWG6 89 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 M0R2P5 195 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 CDC42EP2O14613 210 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 CXCL8P10145 99 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 BRS3P32247 399 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 GNG2P59768 71 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 C6orf52Q5T4I8 152 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 XAF1Q6GPH4 301 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 IDO2Q6ZQW0 420 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 DEFB107AQ8IZN7 70 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms