RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 IGHV3-33P01772 117 aa6.9□□□□□ -1.3
HDLBP-206ENST00000417540 IGHV3-30-3P0DP02 117 aa6.9□□□□□ -1.3
HDLBP-206ENST00000417540 IGHV3-30-5P0DP03 117 aa6.9□□□□□ -1.3
HDLBP-206ENST00000417540 MGST1P10620 155 aaKnown RBP6.9□□□□□ -1.3
HDLBP-206ENST00000417540 SSTP61278 116 aa6.9□□□□□ -1.3
HDLBP-206ENST00000417540 SLAQ13239 276 aa6.9□□□□□ -1.3
HDLBP-206ENST00000417540 DNLZQ5SXM8 178 aa6.9□□□□□ -1.3
HDLBP-206ENST00000417540 DNAJC30Q96LL9 226 aa6.9□□□□□ -1.3
HDLBP-206ENST00000417540 TXNDC17Q9BRA2 123 aa6.9□□□□□ -1.3
HDLBP-206ENST00000417540 LY96Q9Y6Y9 160 aa6.9□□□□□ -1.3
HDLBP-206ENST00000417540 HERC1Q15751 4861 aa6.9□□□□□ -1.3
HDLBP-206ENST00000417540 TRAV1-1A0A0B4J248 108 aa6.89□□□□□ -1.31
HDLBP-206ENST00000417540 TRBV6-4A0A1B0GX49 114 aa6.89□□□□□ -1.31
HDLBP-206ENST00000417540 A0A1W2PPQ1 181 aa6.89□□□□□ -1.31
HDLBP-206ENST00000417540 TEX46H3BTG2 121 aa6.89□□□□□ -1.31
HDLBP-206ENST00000417540 SNAI2O43623 268 aa6.89□□□□□ -1.31
HDLBP-206ENST00000417540 CRYGDP07320 174 aa6.89□□□□□ -1.31
HDLBP-206ENST00000417540 MEF2BQ02080 365 aaPredicted RBP6.89□□□□□ -1.31
HDLBP-206ENST00000417540 PTH2Q96A98 100 aa6.89□□□□□ -1.31
HDLBP-206ENST00000417540 PHLDA3Q9Y5J5 127 aa6.89□□□□□ -1.31
HDLBP-206ENST00000417540 FAT3Q8TDW7 4589 aa6.88□□□□□ -1.31
HDLBP-206ENST00000417540 C19orf71A6NCJ1 209 aa6.88□□□□□ -1.31
HDLBP-206ENST00000417540 A8MWV9 139 aa6.88□□□□□ -1.31
HDLBP-206ENST00000417540 K7EN84 100 aa6.88□□□□□ -1.31
HDLBP-206ENST00000417540 RAB5CP51148 216 aa6.88□□□□□ -1.31
HDLBP-206ENST00000417540 WFDC2Q14508 124 aa6.88□□□□□ -1.31
HDLBP-206ENST00000417540 OR10J3Q5JRS4 329 aa6.88□□□□□ -1.31
HDLBP-206ENST00000417540 ZFP82Q8N141 532 aa6.88□□□□□ -1.31
HDLBP-206ENST00000417540 SFRP2Q96HF1 295 aa6.88□□□□□ -1.31
HDLBP-206ENST00000417540 PRADC1Q9BSG0 188 aa6.88□□□□□ -1.31
HDLBP-206ENST00000417540 Q9HAA7 133 aa6.88□□□□□ -1.31
HDLBP-206ENST00000417540 IGHV3-38A0A0C4DH36 116 aa6.87□□□□□ -1.31
HDLBP-206ENST00000417540 ZNF56Q15929 161 aa6.87□□□□□ -1.31
HDLBP-206ENST00000417540 TOR2AQ5JU69 321 aa6.87□□□□□ -1.31
HDLBP-206ENST00000417540 ZFP2Q6ZN57 461 aa6.87□□□□□ -1.31
HDLBP-206ENST00000417540 SYT8Q8NBV8 401 aa6.87□□□□□ -1.31
HDLBP-206ENST00000417540 TPPP3Q9BW30 176 aa6.87□□□□□ -1.31
HDLBP-206ENST00000417540 RHODO00212 210 aa6.86□□□□□ -1.31
HDLBP-206ENST00000417540 CXCL1P09341 107 aa6.86□□□□□ -1.31
HDLBP-206ENST00000417540 IGLC6P0CF74 106 aa6.86□□□□□ -1.31
HDLBP-206ENST00000417540 MED14OSP0DP75 135 aa6.86□□□□□ -1.31
HDLBP-206ENST00000417540 GNG4P50150 75 aa6.86□□□□□ -1.31
HDLBP-206ENST00000417540 HAMPP81172 84 aa6.86□□□□□ -1.31
HDLBP-206ENST00000417540 LINC01556Q5JQF7 62 aa6.86□□□□□ -1.31
HDLBP-206ENST00000417540 LELP1Q5T871 98 aa6.86□□□□□ -1.31
HDLBP-206ENST00000417540 NEXN-AS1Q8NBZ9 246 aa6.86□□□□□ -1.31
HDLBP-206ENST00000417540 ATP6V0E2Q8NHE4 81 aa6.86□□□□□ -1.31
HDLBP-206ENST00000417540 GTSF1LQ9H1H1 148 aa6.86□□□□□ -1.31
HDLBP-206ENST00000417540 MSRB1Q9NZV6 116 aa6.86□□□□□ -1.31
HDLBP-206ENST00000417540 IFNA1P01562 189 aa6.85□□□□□ -1.31
HDLBP-206ENST00000417540 TIRAPP58753 221 aa6.85□□□□□ -1.31
HDLBP-206ENST00000417540 PIK3CD-AS1Q5SR53 167 aa6.85□□□□□ -1.31
HDLBP-206ENST00000417540 EIF5AL1Q6IS14 154 aaKnown RBP6.85□□□□□ -1.31
HDLBP-206ENST00000417540 DAZ4Q86SG3 579 aaKnown RBP6.85□□□□□ -1.31
HDLBP-206ENST00000417540 OR2D3Q8NGH3 330 aa6.85□□□□□ -1.31
HDLBP-206ENST00000417540 RNASE7Q9H1E1 156 aaKnown RBP6.85□□□□□ -1.31
HDLBP-206ENST00000417540 DAZ3Q9NR90 486 aaKnown RBP6.85□□□□□ -1.31
HDLBP-206ENST00000417540 MED9Q9NWA0 146 aa6.85□□□□□ -1.31
HDLBP-206ENST00000417540 VAX2Q9UIW0 290 aa6.85□□□□□ -1.31
HDLBP-206ENST00000417540 A0A087WTM6 91 aa6.84□□□□□ -1.31
HDLBP-206ENST00000417540 S100A9P06702 114 aaKnown RBP6.84□□□□□ -1.31
HDLBP-206ENST00000417540 MGPP08493 103 aa6.84□□□□□ -1.31
HDLBP-206ENST00000417540 OR5AL1P0C617 328 aa6.84□□□□□ -1.31
HDLBP-206ENST00000417540 BTF3P20290 206 aaKnown RBP6.84□□□□□ -1.31
HDLBP-206ENST00000417540 CEBPGP53567 150 aa6.84□□□□□ -1.31
HDLBP-206ENST00000417540 FER1L6-AS1Q8NA97 138 aa6.84□□□□□ -1.31
HDLBP-206ENST00000417540 DEFB104AQ8WTQ1 72 aa6.84□□□□□ -1.31
HDLBP-206ENST00000417540 AP1S3Q96PC3 154 aa6.84□□□□□ -1.31
HDLBP-206ENST00000417540 SSBP4Q9BWG4 385 aaPredicted RBP6.84□□□□□ -1.31
HDLBP-206ENST00000417540 KIF25-AS1Q9Y6Z4 181 aa6.84□□□□□ -1.31
HDLBP-206ENST00000417540 PDE6DO43924 150 aa6.83□□□□□ -1.32
HDLBP-206ENST00000417540 EVI2AP22794 236 aa6.83□□□□□ -1.32
HDLBP-206ENST00000417540 ERVFC1-1P60608 527 aa6.83□□□□□ -1.32
HDLBP-206ENST00000417540 UBE2D3P61077 147 aa6.83□□□□□ -1.32
HDLBP-206ENST00000417540 UBE2D2P62837 147 aa6.83□□□□□ -1.32
HDLBP-206ENST00000417540 SPANXN1Q5VSR9 72 aa6.83□□□□□ -1.32
HDLBP-206ENST00000417540 LECT2O14960 151 aa6.82□□□□□ -1.32
HDLBP-206ENST00000417540 P01737 135 aa6.82□□□□□ -1.32
HDLBP-206ENST00000417540 CTRLP40313 264 aa6.82□□□□□ -1.32
HDLBP-206ENST00000417540 SUMO4Q6EEV6 95 aa6.82□□□□□ -1.32
HDLBP-206ENST00000417540 LYPD6BQ8NI32 183 aa6.82□□□□□ -1.32
HDLBP-206ENST00000417540 TRAV8-6A0A0B4J262 113 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 LRCOL1A6NCL2 159 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 IBA57-AS1B1ANH7 110 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 C9JQL5 133 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 CIDEAO60543 219 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 KRTAP10-1P60331 282 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 MPV17L2Q567V2 206 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 CLPSL2Q6UWE3 100 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 LYZL1Q6UWQ5 148 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 SH2D6Q7Z4S9 175 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 NUDT10Q8NFP7 164 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 NUDT11Q96G61 164 aa6.81□□□□□ -1.32
HDLBP-206ENST00000417540 RPP21Q9H633 154 aaKnown RBP6.81□□□□□ -1.32
HDLBP-206ENST00000417540 TRAV26-2A0A0B4J265 109 aa6.8□□□□□ -1.32
HDLBP-206ENST00000417540 FOXA3P55318 350 aaPredicted RBP6.8□□□□□ -1.32
HDLBP-206ENST00000417540 SRSF3P84103 164 aaKnown RBP6.8□□□□□ -1.32
HDLBP-206ENST00000417540 NTM-AS1Q6ZSK4 140 aa6.8□□□□□ -1.32
HDLBP-206ENST00000417540 NIT1Q86X76 327 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms