RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	OR10AG1	Q8NH19	301 aa		11.3	□□□□□ -0.6
DDR1-231	ENST00000417521	TPPP3	Q9BW30	176 aa		11.3	□□□□□ -0.6
DDR1-231	ENST00000417521	OSTC	Q9NRP0	149 aa		11.3	□□□□□ -0.6
DDR1-231	ENST00000417521	PHLDA3	Q9Y5J5	127 aa		11.3	□□□□□ -0.6
DDR1-231	ENST00000417521	TRAV4	A0A0B4J268	109 aa		11.29	□□□□□ -0.6
DDR1-231	ENST00000417521	XKRY2	A2RUG3	117 aa		11.29	□□□□□ -0.6
DDR1-231	ENST00000417521	IGLC6	P0CF74	106 aa		11.29	□□□□□ -0.6
DDR1-231	ENST00000417521	MED14OS	P0DP75	135 aa		11.29	□□□□□ -0.6
DDR1-231	ENST00000417521	TTC32	Q5I0X7	151 aa		11.29	□□□□□ -0.6
DDR1-231	ENST00000417521	DMRTA1	Q5VZB9	504 aa		11.29	□□□□□ -0.6
DDR1-231	ENST00000417521	C6orf223	Q8N319	242 aa		11.29	□□□□□ -0.6
DDR1-231	ENST00000417521	FER1L6-AS1	Q8NA97	138 aa		11.29	□□□□□ -0.6
DDR1-231	ENST00000417521	PTH2	Q96A98	100 aa		11.29	□□□□□ -0.6
DDR1-231	ENST00000417521	SFRP2	Q96HF1	295 aa		11.29	□□□□□ -0.6
DDR1-231	ENST00000417521	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.29	□□□□□ -0.6
DDR1-231	ENST00000417521		F8W036	122 aa		11.28	□□□□□ -0.6
DDR1-231	ENST00000417521		M0R381	172 aa		11.28	□□□□□ -0.6
DDR1-231	ENST00000417521	SNAI2	O43623	268 aa		11.28	□□□□□ -0.6
DDR1-231	ENST00000417521	OR5AL1	P0C617	328 aa		11.28	□□□□□ -0.6
DDR1-231	ENST00000417521	SST	P61278	116 aa		11.28	□□□□□ -0.6
DDR1-231	ENST00000417521	OR4C5	Q8NGB2	326 aa		11.28	□□□□□ -0.6
DDR1-231	ENST00000417521	NACA	E9PAV3	2078 aa		11.28	□□□□□ -0.6
DDR1-231	ENST00000417521		A0A1W2PPQ1	181 aa		11.27	□□□□□ -0.6
DDR1-231	ENST00000417521	C15orf54	Q8N8G6	183 aa		11.27	□□□□□ -0.6
DDR1-231	ENST00000417521	OR10G8	Q8NGN5	311 aa		11.27	□□□□□ -0.6
DDR1-231	ENST00000417521	GTSF1	Q8WW33	167 aa		11.27	□□□□□ -0.6
DDR1-231	ENST00000417521	JPT2	Q9H910	190 aa		11.27	□□□□□ -0.6
DDR1-231	ENST00000417521		V9GYV3	84 aa		11.27	□□□□□ -0.6
DDR1-231	ENST00000417521	NDUFA5	Q16718	116 aa		11.26	□□□□□ -0.61
DDR1-231	ENST00000417521	LYZL1	Q6UWQ5	148 aa		11.26	□□□□□ -0.61
DDR1-231	ENST00000417521	NEGR1	Q7Z3B1	354 aa		11.26	□□□□□ -0.61
DDR1-231	ENST00000417521	ZFP82	Q8N141	532 aa		11.26	□□□□□ -0.61
DDR1-231	ENST00000417521	SYT8	Q8NBV8	401 aa		11.26	□□□□□ -0.61
DDR1-231	ENST00000417521		A8MWL6	223 aa		11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	RS1	O15537	224 aa		11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	CIDEA	O60543	219 aa		11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	BTF3	P20290	206 aa	Known RBP	11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	CT83	Q5H943	113 aa		11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	SPANXN1	Q5VSR9	72 aa		11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	CFAP126	Q5VTH2	177 aa		11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	LYPD5	Q6UWN5	251 aa		11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	SEC11C	Q9BY50	192 aa		11.25	□□□□□ -0.61
DDR1-231	ENST00000417521		K7EQD1	137 aa		11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	NXPH4	O95158	308 aa		11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	PNRC1	Q12796	327 aa	Predicted RBP	11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	PIK3CD-AS1	Q5SR53	167 aa		11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	SAMD10	Q9BYL1	202 aa		11.25	□□□□□ -0.61
DDR1-231	ENST00000417521	DNAH11	Q96DT5	4516 aa		11.24	□□□□□ -0.61
DDR1-231	ENST00000417521	IGHV3-73	A0A0B4J1V6	119 aa		11.24	□□□□□ -0.61
DDR1-231	ENST00000417521	GYPE	P15421	78 aa		11.24	□□□□□ -0.61
DDR1-231	ENST00000417521	SRI	P30626	198 aa		11.24	□□□□□ -0.61
DDR1-231	ENST00000417521	CTRL	P40313	264 aa		11.24	□□□□□ -0.61
DDR1-231	ENST00000417521	SLC7A5P1	Q8MH63	180 aa		11.24	□□□□□ -0.61
DDR1-231	ENST00000417521	TSKU	Q8WUA8	353 aa		11.24	□□□□□ -0.61
DDR1-231	ENST00000417521	KRTAP1-5	Q9BYS1	174 aa		11.24	□□□□□ -0.61
DDR1-231	ENST00000417521	PKHD1	P08F94	4074 aa		11.23	□□□□□ -0.61
DDR1-231	ENST00000417521	PKD1	P98161	4303 aa		11.23	□□□□□ -0.61
DDR1-231	ENST00000417521		A8MWV9	139 aa		11.23	□□□□□ -0.61
DDR1-231	ENST00000417521		F2Z2F3	143 aa		11.23	□□□□□ -0.61
DDR1-231	ENST00000417521	SIVA1	O15304	175 aa		11.23	□□□□□ -0.61
DDR1-231	ENST00000417521	PGLYRP4	Q96LB8	373 aa		11.23	□□□□□ -0.61
DDR1-231	ENST00000417521	MSRB1	Q9NZV6	116 aa		11.23	□□□□□ -0.61
DDR1-231	ENST00000417521		A0A087WWL8	130 aa		11.22	□□□□□ -0.61
DDR1-231	ENST00000417521	GATA1	P15976	413 aa	Predicted RBP	11.22	□□□□□ -0.61
DDR1-231	ENST00000417521	TNP2	Q05952	138 aa		11.22	□□□□□ -0.61
DDR1-231	ENST00000417521	C10orf91	Q5T1B1	145 aa		11.22	□□□□□ -0.61
DDR1-231	ENST00000417521	HIGD1C	A8MV81	97 aa		11.21	□□□□□ -0.61
DDR1-231	ENST00000417521	FOXA3	P55318	350 aa	Predicted RBP	11.21	□□□□□ -0.61
DDR1-231	ENST00000417521	CACNG7	P62955	275 aa		11.21	□□□□□ -0.61
DDR1-231	ENST00000417521	FAM74A4	Q5TZK3	123 aa		11.21	□□□□□ -0.61
DDR1-231	ENST00000417521	SH2D6	Q7Z4S9	175 aa		11.21	□□□□□ -0.61
DDR1-231	ENST00000417521	GFRA4	Q9GZZ7	299 aa		11.21	□□□□□ -0.61
DDR1-231	ENST00000417521	CRYGD	P07320	174 aa		11.2	□□□□□ -0.62
DDR1-231	ENST00000417521	NTF3	P20783	257 aa		11.2	□□□□□ -0.62
DDR1-231	ENST00000417521	UFSP1	Q6NVU6	142 aa		11.2	□□□□□ -0.62
DDR1-231	ENST00000417521	CNFN	Q9BYD5	112 aa		11.2	□□□□□ -0.62
DDR1-231	ENST00000417521	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.2	□□□□□ -0.62
DDR1-231	ENST00000417521	DYNC1H1	Q14204	4646 aa	Known RBP	11.2	□□□□□ -0.62
DDR1-231	ENST00000417521	KIAA1109	Q2LD37	5005 aa		11.19	□□□□□ -0.62
DDR1-231	ENST00000417521	TRBV6-4	A0A1B0GX49	114 aa		11.19	□□□□□ -0.62
DDR1-231	ENST00000417521	MT-ND4L	P03901	98 aa		11.19	□□□□□ -0.62
DDR1-231	ENST00000417521		Q6ZSN1	163 aa		11.19	□□□□□ -0.62
DDR1-231	ENST00000417521	C14orf178	Q8N769	122 aa	Predicted RBP	11.19	□□□□□ -0.62
DDR1-231	ENST00000417521	SMIM27	A0A1W2PRY6	76 aa		11.19	□□□□□ -0.62
DDR1-231	ENST00000417521	FAM231B	A6NCW3	169 aa		11.19	□□□□□ -0.62
DDR1-231	ENST00000417521	PPP1R2P9	O14990	202 aa		11.19	□□□□□ -0.62
DDR1-231	ENST00000417521	TWIST1	Q15672	202 aa		11.19	□□□□□ -0.62
DDR1-231	ENST00000417521	WDR73	Q6P4I2	378 aa		11.19	□□□□□ -0.62
DDR1-231	ENST00000417521	ZFP2	Q6ZN57	461 aa		11.19	□□□□□ -0.62
DDR1-231	ENST00000417521	NUP35	Q8NFH5	326 aa		11.19	□□□□□ -0.62
DDR1-231	ENST00000417521	LOC100131303	A0A0U1RQF7	123 aa		11.18	□□□□□ -0.62
DDR1-231	ENST00000417521	SLC25A29	Q8N8R3	303 aa		11.18	□□□□□ -0.62
DDR1-231	ENST00000417521	AP1S3	Q96PC3	154 aa		11.18	□□□□□ -0.62
DDR1-231	ENST00000417521	PRADC1	Q9BSG0	188 aa		11.18	□□□□□ -0.62
DDR1-231	ENST00000417521	NAT8B	Q9UHF3	227 aa		11.18	□□□□□ -0.62
DDR1-231	ENST00000417521		K7EP13	123 aa		11.17	□□□□□ -0.62
DDR1-231	ENST00000417521	RHOD	O00212	210 aa		11.17	□□□□□ -0.62
DDR1-231	ENST00000417521	EVI2A	P22794	236 aa		11.17	□□□□□ -0.62
DDR1-231	ENST00000417521	TIRAP	P58753	221 aa		11.17	□□□□□ -0.62
DDR1-231	ENST00000417521	RHOH	Q15669	191 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms