RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 Q6Q795 121 aa10.09□□□□□ -0.79
HNF4A-204ENST00000415691 RNF125Q96EQ8 232 aa10.09□□□□□ -0.79
HNF4A-204ENST00000415691 NSD1Q96L73 2696 aaPredicted RBP10.09□□□□□ -0.79
HNF4A-204ENST00000415691 LINC01549A6NIU2 74 aa10.08□□□□□ -0.8
HNF4A-204ENST00000415691 B5MCH6 92 aa10.08□□□□□ -0.8
HNF4A-204ENST00000415691 GAS8-AS1O95177 125 aa10.08□□□□□ -0.8
HNF4A-204ENST00000415691 ESM1Q9NQ30 184 aa10.08□□□□□ -0.8
HNF4A-204ENST00000415691 FN1P02751 2386 aaKnown RBP10.08□□□□□ -0.8
HNF4A-204ENST00000415691 IGHG4P01861 327 aa10.08□□□□□ -0.8
HNF4A-204ENST00000415691 PPP1R27Q86WC6 154 aa10.08□□□□□ -0.8
HNF4A-204ENST00000415691 MSRB1Q9NZV6 116 aa10.08□□□□□ -0.8
HNF4A-204ENST00000415691 BLCAPP62952 87 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 AGRNO00468 2067 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 LINC01548A6NM66 108 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 GAGE7O76087 117 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 CD7P09564 240 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 GAGE12FP0CL80 117 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 GAGE12GP0CL81 117 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 GAGE12IP0CL82 117 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 GAGE4Q13068 117 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 TMEM78Q5T7P6 136 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 Q6ZS46 218 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 C5orf56Q8N8D9 126 aa10.07□□□□□ -0.8
HNF4A-204ENST00000415691 TEP1Q99973 2627 aaKnown RBP10.07□□□□□ -0.8
HNF4A-204ENST00000415691 CRLF1O75462 422 aa10.06□□□□□ -0.8
HNF4A-204ENST00000415691 ZNF80P51504 273 aaPredicted RBP10.06□□□□□ -0.8
HNF4A-204ENST00000415691 NRACQ8N912 160 aa10.06□□□□□ -0.8
HNF4A-204ENST00000415691 VPREB3Q9UKI3 123 aa10.06□□□□□ -0.8
HNF4A-204ENST00000415691 LOC107984156A0A0G2JMH3 177 aa10.06□□□□□ -0.8
HNF4A-204ENST00000415691 DNAJC9-AS1A6NH13 148 aa10.06□□□□□ -0.8
HNF4A-204ENST00000415691 FABP5P3A8MUU1 101 aa10.06□□□□□ -0.8
HNF4A-204ENST00000415691 K7EIM0 57 aa10.06□□□□□ -0.8
HNF4A-204ENST00000415691 NDUFV3P56181 108 aaKnown RBP10.06□□□□□ -0.8
HNF4A-204ENST00000415691 SHISA2Q6UWI4 295 aa10.06□□□□□ -0.8
HNF4A-204ENST00000415691 ARL17AQ8IVW1 177 aa10.06□□□□□ -0.8
HNF4A-204ENST00000415691 PTH2Q96A98 100 aa10.06□□□□□ -0.8
HNF4A-204ENST00000415691 MOB4Q9Y3A3 225 aa10.06□□□□□ -0.8
HNF4A-204ENST00000415691 PLXNB1O43157 2135 aa10.06□□□□□ -0.8
HNF4A-204ENST00000415691 NIPBLQ6KC79 2804 aaeCLIP10.05□□□□□ -0.8
HNF4A-204ENST00000415691 APELAP0DMC3 54 aa10.05□□□□□ -0.8
HNF4A-204ENST00000415691 ZFP2Q6ZN57 461 aa10.05□□□□□ -0.8
HNF4A-204ENST00000415691 IGKV2-40A0A087WW87 121 aaPredicted RBP10.05□□□□□ -0.8
HNF4A-204ENST00000415691 IGKV2D-40P01614 121 aaPredicted RBP10.05□□□□□ -0.8
HNF4A-204ENST00000415691 GAGE2BQ13066 116 aa10.05□□□□□ -0.8
HNF4A-204ENST00000415691 GAGE2EQ4V326 116 aa10.05□□□□□ -0.8
HNF4A-204ENST00000415691 GAGE2DQ9UEU5 116 aa10.05□□□□□ -0.8
HNF4A-204ENST00000415691 NF1P21359 2839 aa10.04□□□□□ -0.8
HNF4A-204ENST00000415691 IGHV7-81A0A0B4J1V7 117 aa10.04□□□□□ -0.8
HNF4A-204ENST00000415691 CNIH1O95406 144 aa10.04□□□□□ -0.8
HNF4A-204ENST00000415691 TCL1BO95988 128 aa10.04□□□□□ -0.8
HNF4A-204ENST00000415691 GATA1P15976 413 aaPredicted RBP10.04□□□□□ -0.8
HNF4A-204ENST00000415691 RPL32P62910 135 aaKnown RBP10.04□□□□□ -0.8
HNF4A-204ENST00000415691 NDPQ00604 133 aa10.04□□□□□ -0.8
HNF4A-204ENST00000415691 NDUFA11Q86Y39 141 aa10.04□□□□□ -0.8
HNF4A-204ENST00000415691 ANKRD29Q8N6D5 301 aa10.04□□□□□ -0.8
HNF4A-204ENST00000415691 ORM1P02763 201 aa10.04□□□□□ -0.8
HNF4A-204ENST00000415691 RPL7P18124 248 aaKnown RBP10.04□□□□□ -0.8
HNF4A-204ENST00000415691 NEXN-AS1Q8NBZ9 246 aa10.04□□□□□ -0.8
HNF4A-204ENST00000415691 LINC01600Q96MT4 127 aa10.04□□□□□ -0.8
HNF4A-204ENST00000415691 HERV-K104P63124 156 aa10.03□□□□□ -0.8
HNF4A-204ENST00000415691 ORMDL2Q53FV1 153 aa10.03□□□□□ -0.8
HNF4A-204ENST00000415691 SNCGO76070 127 aa10.02□□□□□ -0.8
HNF4A-204ENST00000415691 PRADC1Q9BSG0 188 aa10.02□□□□□ -0.8
HNF4A-204ENST00000415691 LINC00527Q9UJ94 153 aa10.02□□□□□ -0.8
HNF4A-204ENST00000415691 IGHV4-4A0A075B6R2 117 aa10.02□□□□□ -0.81
HNF4A-204ENST00000415691 ZNF815PA8K554 130 aa10.02□□□□□ -0.81
HNF4A-204ENST00000415691 SCGB1C2P0DMR2 95 aa10.02□□□□□ -0.81
HNF4A-204ENST00000415691 IFITM1P13164 125 aa10.02□□□□□ -0.81
HNF4A-204ENST00000415691 SRSF9Q13242 221 aaKnown RBP eCLIP10.02□□□□□ -0.813e-7■■■■□ 25
HNF4A-204ENST00000415691 TMEM86BQ8N661 226 aa10.02□□□□□ -0.81
HNF4A-204ENST00000415691 TOMM6Q96B49 74 aa10.02□□□□□ -0.81
HNF4A-204ENST00000415691 HILS1P60008 231 aa10.01□□□□□ -0.81
HNF4A-204ENST00000415691 SCGB1D4Q6XE38 83 aa10.01□□□□□ -0.81
HNF4A-204ENST00000415691 C10orf126Q8N4M7 172 aa10.01□□□□□ -0.81
HNF4A-204ENST00000415691 Q8TAT8 98 aa10.01□□□□□ -0.81
HNF4A-204ENST00000415691 SMIM2Q9BVW6 85 aa10.01□□□□□ -0.81
HNF4A-204ENST00000415691 RBAKDNA6NC62 111 aa10□□□□□ -0.81
HNF4A-204ENST00000415691 ATP6V0E1O15342 81 aa10□□□□□ -0.81
HNF4A-204ENST00000415691 TTC32Q5I0X7 151 aa10□□□□□ -0.81
HNF4A-204ENST00000415691 KIR2DL4Q99706 377 aa10□□□□□ -0.81
HNF4A-204ENST00000415691 SCGB3A1Q96QR1 104 aa10□□□□□ -0.81
HNF4A-204ENST00000415691 TNFRSF18Q9Y5U5 241 aa10□□□□□ -0.81
HNF4A-204ENST00000415691 G3V318 75 aa9.99□□□□□ -0.81
HNF4A-204ENST00000415691 SLC25A20O43772 301 aa9.99□□□□□ -0.81
HNF4A-204ENST00000415691 IGHG2P01859 326 aa9.99□□□□□ -0.81
HNF4A-204ENST00000415691 ERCC8Q13216 396 aa9.99□□□□□ -0.81
HNF4A-204ENST00000415691 ZNF702PQ9H963 129 aa9.99□□□□□ -0.81
HNF4A-204ENST00000415691 RNASE1P07998 156 aaKnown RBP9.99□□□□□ -0.81
HNF4A-204ENST00000415691 PRB4P10163 310 aaPredicted RBP9.99□□□□□ -0.81
HNF4A-204ENST00000415691 HLA-DMBP28068 263 aa9.99□□□□□ -0.81
HNF4A-204ENST00000415691 SLC50A1Q9BRV3 221 aa9.99□□□□□ -0.81
HNF4A-204ENST00000415691 CCDC179H3BU77 68 aa9.98□□□□□ -0.81
HNF4A-204ENST00000415691 PAPPA-AS1Q5QFB9 102 aa9.98□□□□□ -0.81
HNF4A-204ENST00000415691 SMIM20Q8N5G0 67 aa9.98□□□□□ -0.81
HNF4A-204ENST00000415691 PLEKHB2Q96CS7 222 aa9.98□□□□□ -0.81
HNF4A-204ENST00000415691 A0A0J9YY99 117 aa9.98□□□□□ -0.81
HNF4A-204ENST00000415691 TRGV3P03979 118 aa9.98□□□□□ -0.81
HNF4A-204ENST00000415691 MRPL23Q16540 153 aaKnown RBP9.98□□□□□ -0.81
HNF4A-204ENST00000415691 ECSCRQ19T08 205 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms