RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 PFN2P35080 140 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 ERCC8Q13216 396 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 RNASE10Q5GAN6 216 aaKnown RBP2.86□□□□□ -1.95
PTPRK-210ENST00000415055 MRPL55Q7Z7F7 128 aaKnown RBP2.86□□□□□ -1.95
PTPRK-210ENST00000415055 S100A7AQ86SG5 101 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 CBLN2Q8IUK8 224 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 CEND1Q8N111 149 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 OR10P1Q8NGE3 313 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 OR10G4Q8NGN3 311 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 OR13C8Q8NGS7 320 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 RMI2Q96E14 147 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 ARL6Q9H0F7 186 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 ZNF331Q9NQX6 463 aaPredicted RBP2.86□□□□□ -1.95
PTPRK-210ENST00000415055 TRAV8-1A0A0A6YYK1 113 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 IGHV3OR16-9A0A0B4J2B5 98 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 SLC17A3O00476 420 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 PFN1P07737 140 aaKnown RBP2.85□□□□□ -1.95
PTPRK-210ENST00000415055 GIPP09681 153 aaPredicted RBP2.85□□□□□ -1.95
PTPRK-210ENST00000415055 OR4E1P0C645 316 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 AKR1C4P17516 323 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 DSCR10P59022 87 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 SMCO1Q147U7 214 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 ATP6V1FQ16864 119 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 IBA57Q5T440 356 aaKnown RBP2.85□□□□□ -1.95
PTPRK-210ENST00000415055 CYP2G1PQ6ZSU1 146 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 DAZ4Q86SG3 579 aaKnown RBP2.85□□□□□ -1.95
PTPRK-210ENST00000415055 C20orf203Q8NBC4 194 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 ZC2HC1AQ96GY0 325 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 LINC00477Q96M19 166 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 ODF3Q96PU9 254 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 MAP1LC3CQ9BXW4 147 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 NAA60Q9H7X0 242 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 RPS10P5Q9NQ39 176 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 DAZ3Q9NR90 486 aaKnown RBP2.85□□□□□ -1.95
PTPRK-210ENST00000415055 PXMP4Q9Y6I8 212 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 URGCP-MRPS24S4R325 110 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 LPAP08519 4548 aa2.85□□□□□ -1.95
PTPRK-210ENST00000415055 FAT4Q6V0I7 4981 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 TRAV4A0A0B4J268 109 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 RAB19A4D1S5 217 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 ANKRD65E5RJM6 399 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 H3BP45 60 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 CD3DP04234 171 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 CXCL2P19875 107 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 CCR6P51684 374 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 AQP4P55087 323 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 PRR3P79522 188 aaKnown RBP2.84□□□□□ -1.95
PTPRK-210ENST00000415055 RPL18AQ02543 176 aaKnown RBP2.84□□□□□ -1.95
PTPRK-210ENST00000415055 TMEM183BQ1AE95 376 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 SPANXN5Q5MJ07 72 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 Q6ZQT7 251 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 LHFPL1Q86WI0 220 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 BPIFA4PQ86YQ2 179 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 IQCF2Q8IXL9 164 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 TMEM183AQ8IXX5 376 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 TERB2Q8NHR7 220 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 UBE2WQ96B02 151 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 DNAJC30Q96LL9 226 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 C2orf50Q96LR7 162 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 CNBD2Q96M20 576 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 LINC01600Q96MT4 127 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 PRADC1Q9BSG0 188 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 GTSF1LQ9H1H1 148 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 ARV1Q9H2C2 271 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 NAGKQ9UJ70 344 aa2.84□□□□□ -1.95
PTPRK-210ENST00000415055 IGHV3-73A0A0B4J1V6 119 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 ANKRD20A5PA0PJZ0 165 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 KLLNB2CW77 178 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 M0R3E3 92 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 COX7A2P2O60397 106 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 MED6O75586 246 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 OR10J4P0C629 311 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 RRAS2P62070 204 aaPredicted RBP2.83□□□□□ -1.96
PTPRK-210ENST00000415055 RAB31Q13636 194 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 TMEM78Q5T7P6 136 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 LINC00305Q7Z4B0 112 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 LYZL2Q7Z4W2 148 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 SLC25A2Q9BXI2 301 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 SRRQ9GZT4 340 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 NAA50Q9GZZ1 169 aaKnown RBP2.83□□□□□ -1.96
PTPRK-210ENST00000415055 TREM1Q9NP99 234 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 COMMD3Q9UBI1 195 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 KLK12Q9UKR0 248 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 KIF25-AS1Q9Y6Z4 181 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 V9GYY9 64 aa2.83□□□□□ -1.96
PTPRK-210ENST00000415055 IGKV2-40A0A087WW87 121 aaPredicted RBP2.82□□□□□ -1.96
PTPRK-210ENST00000415055 A0A0J9YXV3 536 aa2.82□□□□□ -1.96
PTPRK-210ENST00000415055 FAM25AB3EWG3 89 aa2.82□□□□□ -1.96
PTPRK-210ENST00000415055 FAM25CB3EWG5 89 aa2.82□□□□□ -1.96
PTPRK-210ENST00000415055 FAM25GB3EWG6 89 aa2.82□□□□□ -1.96
PTPRK-210ENST00000415055 H3BQ15 152 aa2.82□□□□□ -1.96
PTPRK-210ENST00000415055 PANO1I0J062 215 aa2.82□□□□□ -1.96
PTPRK-210ENST00000415055 UPK1BO75841 260 aa2.82□□□□□ -1.96
PTPRK-210ENST00000415055 IGKV2D-40P01614 121 aaPredicted RBP2.82□□□□□ -1.96
PTPRK-210ENST00000415055 HLA-DQA1P01909 254 aa2.82□□□□□ -1.96
PTPRK-210ENST00000415055 SEC11BP0C7V7 166 aa2.82□□□□□ -1.96
PTPRK-210ENST00000415055 HIST1H1EP10412 219 aaKnown RBP2.82□□□□□ -1.96
PTPRK-210ENST00000415055 TGFBR1P36897 503 aa2.82□□□□□ -1.96
PTPRK-210ENST00000415055 NMUP48645 174 aa2.82□□□□□ -1.96
PTPRK-210ENST00000415055 POLR2GP62487 172 aaKnown RBP eCLIP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms