RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 PCNPQ8WW12 178 aaKnown RBP5.72□□□□□ -1.49
UPF3AP1-201ENST00000413731 ZC2HC1AQ96GY0 325 aa5.72□□□□□ -1.49
UPF3AP1-201ENST00000413731 MSRB1Q9NZV6 116 aa5.72□□□□□ -1.49
UPF3AP1-201ENST00000413731 ZFP30Q9Y2G7 519 aa5.72□□□□□ -1.49
UPF3AP1-201ENST00000413731 TRAV26-1A0A087WT03 109 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 A0A0J9YY99 117 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 TRBV6-1A0A0K0K1D8 114 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 C5orf52A6NGY3 159 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 M0R036 132 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 GNRH2O43555 120 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 SH2D1AO60880 128 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 LTAP01374 205 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 ORM1P02763 201 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 S100A9P06702 114 aaKnown RBP5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 S100A4P26447 101 aaKnown RBP5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 FAM162BQ5T6X4 162 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 TEX261Q6UWH6 196 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 TXNDC17Q9BRA2 123 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 KRTAP9-2Q9BYQ4 174 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 C11orf21Q9P2W6 132 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 VPS13BQ7Z7G8 4022 aa5.71□□□□□ -1.5
UPF3AP1-201ENST00000413731 GAGE12JA6NER3 117 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 FABP5P3A8MUU1 101 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 EPM2AB3EWF7 344 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 B4DEV8 164 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 C9JCJ5 164 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 M0R2P5 195 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 PDE6DO43924 150 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 ASIPP42127 132 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 RPL35P42766 123 aaKnown RBP5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 CCL18P55774 89 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 CENPWQ5EE01 88 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 PRR27Q6MZM9 219 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 C11orf52Q96A22 123 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 DERL1Q9BUN8 251 aa5.7□□□□□ -1.5
UPF3AP1-201ENST00000413731 TMSB15BA0A087X1C1 80 aa5.69□□□□□ -1.5
UPF3AP1-201ENST00000413731 IGKV3D-20A0A0C4DH25 116 aa5.69□□□□□ -1.5
UPF3AP1-201ENST00000413731 TRGV4A0A0C4DH28 118 aa5.69□□□□□ -1.5
UPF3AP1-201ENST00000413731 H3BVH4 76 aa5.69□□□□□ -1.5
UPF3AP1-201ENST00000413731 SFTA3P0C7M3 94 aa5.69□□□□□ -1.5
UPF3AP1-201ENST00000413731 TAGLN2P37802 199 aaKnown RBP5.69□□□□□ -1.5
UPF3AP1-201ENST00000413731 GNG4P50150 75 aa5.69□□□□□ -1.5
UPF3AP1-201ENST00000413731 BAGE2Q86Y30 109 aa5.69□□□□□ -1.5
UPF3AP1-201ENST00000413731 OR4C5Q8NGB2 326 aa5.69□□□□□ -1.5
UPF3AP1-201ENST00000413731 C18orf15Q96N68 181 aa5.69□□□□□ -1.5
UPF3AP1-201ENST00000413731 MED9Q9NWA0 146 aa5.69□□□□□ -1.5
UPF3AP1-201ENST00000413731 VAX2Q9UIW0 290 aa5.69□□□□□ -1.5
UPF3AP1-201ENST00000413731 MYCBP2O75592 4640 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 TRAV4A0A0B4J268 109 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 A0A1W2PPQ1 181 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 GRIFINA4D1Z8 144 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 INAFM2P0DMQ5 153 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 MGST1P10620 155 aaKnown RBP5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 FUSP35637 526 aaKnown RBP eCLIP5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 GAGE2BQ13066 116 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 ZNF876PQ49A33 203 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 GAGE2EQ4V326 116 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 LBHQ53QV2 105 aaPredicted RBP5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 TTC32Q5I0X7 151 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 GAGE2AQ6NT46 116 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 RASL10AQ92737 203 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 C9orf85Q96MD7 179 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 Q9H8V8 135 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 GAGE2DQ9UEU5 116 aa5.68□□□□□ -1.5
UPF3AP1-201ENST00000413731 KRBOX1C9JBD0 128 aa5.67□□□□□ -1.5
UPF3AP1-201ENST00000413731 RNASE3P12724 160 aaKnown RBP5.67□□□□□ -1.5
UPF3AP1-201ENST00000413731 CRIP1P50238 77 aa5.67□□□□□ -1.5
UPF3AP1-201ENST00000413731 CEBPGP53567 150 aa5.67□□□□□ -1.5
UPF3AP1-201ENST00000413731 ZNF506Q5JVG8 444 aa5.67□□□□□ -1.5
UPF3AP1-201ENST00000413731 Q5VSD8 79 aa5.67□□□□□ -1.5
UPF3AP1-201ENST00000413731 COX8CQ7Z4L0 72 aa5.67□□□□□ -1.5
UPF3AP1-201ENST00000413731 LYPD6BQ8NI32 183 aa5.67□□□□□ -1.5
UPF3AP1-201ENST00000413731 ZNF479Q96JC4 524 aa5.67□□□□□ -1.5
UPF3AP1-201ENST00000413731 PRO0255Q9UI72 69 aa5.67□□□□□ -1.5
UPF3AP1-201ENST00000413731 ICOSQ9Y6W8 199 aa5.67□□□□□ -1.5
UPF3AP1-201ENST00000413731 FAT1Q14517 4588 aa5.67□□□□□ -1.5
UPF3AP1-201ENST00000413731 hDV102S1A0JD36 115 aa5.66□□□□□ -1.5
UPF3AP1-201ENST00000413731 RBFOX3A6NFN3 312 aa5.66□□□□□ -1.5
UPF3AP1-201ENST00000413731 H3BNG1 76 aa5.66□□□□□ -1.5
UPF3AP1-201ENST00000413731 M0R381 172 aa5.66□□□□□ -1.5
UPF3AP1-201ENST00000413731 RPL19P84098 196 aaKnown RBP5.66□□□□□ -1.5
UPF3AP1-201ENST00000413731 SLAQ13239 276 aa5.66□□□□□ -1.5
UPF3AP1-201ENST00000413731 IL36BQ9NZH7 164 aa5.66□□□□□ -1.5
UPF3AP1-201ENST00000413731 HHLA3Q9XRX5 114 aa5.66□□□□□ -1.5
UPF3AP1-201ENST00000413731 PHLDA3Q9Y5J5 127 aa5.66□□□□□ -1.5
UPF3AP1-201ENST00000413731 IGHV3-73A0A0B4J1V6 119 aa5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 RAB19A4D1S5 217 aa5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 ARMS2P0C7Q2 107 aa5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 SRIP30626 198 aa5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 CRYBA4P53673 196 aa5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 LINC00315P59091 139 aa5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 IFITM2Q01629 132 aa5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 FHL2Q14192 279 aa5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 PAPPA-AS1Q5QFB9 102 aa5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 CFAP126Q5VTH2 177 aa5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 Q6ZRN7 208 aaPredicted RBP5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 ZFP82Q8N141 532 aa5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 SMIM12Q96EX1 92 aa5.65□□□□□ -1.5
UPF3AP1-201ENST00000413731 VSIG2Q96IQ7 327 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms