RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 LELP1Q5T871 98 aa17.75■□□□□ 0.43
VEGFA-207ENST00000413642 NFE4Q86UQ8 179 aa17.75■□□□□ 0.43
VEGFA-207ENST00000413642 SLC51BQ86UW2 128 aa17.74■□□□□ 0.43
VEGFA-207ENST00000413642 C11orf52Q96A22 123 aa17.74■□□□□ 0.43
VEGFA-207ENST00000413642 MUC21A0A0G2JKD1 596 aa17.73■□□□□ 0.43
VEGFA-207ENST00000413642 MUC21A0A140T8X8 626 aa17.73■□□□□ 0.43
VEGFA-207ENST00000413642 IGHV3-30P01768 117 aa17.73■□□□□ 0.43
VEGFA-207ENST00000413642 IGHV3-33P01772 117 aa17.73■□□□□ 0.43
VEGFA-207ENST00000413642 IGHV3-30-3P0DP02 117 aa17.73■□□□□ 0.43
VEGFA-207ENST00000413642 IGHV3-30-5P0DP03 117 aa17.73■□□□□ 0.43
VEGFA-207ENST00000413642 LINC01556Q5JQF7 62 aa17.73■□□□□ 0.43
VEGFA-207ENST00000413642 ZFP82Q8N141 532 aa17.73■□□□□ 0.43
VEGFA-207ENST00000413642 K7EP13 123 aa17.72■□□□□ 0.43
VEGFA-207ENST00000413642 RHODO00212 210 aa17.72■□□□□ 0.43
VEGFA-207ENST00000413642 AKAP14Q86UN6 197 aa17.72■□□□□ 0.43
VEGFA-207ENST00000413642 Q8N3U1 123 aa17.72■□□□□ 0.43
VEGFA-207ENST00000413642 OR10AG1Q8NH19 301 aa17.72■□□□□ 0.43
VEGFA-207ENST00000413642 LRP1BQ9NZR2 4599 aa17.71■□□□□ 0.43
VEGFA-207ENST00000413642 RAB19A4D1S5 217 aa17.71■□□□□ 0.43
VEGFA-207ENST00000413642 C9orf62Q8N4C0 152 aa17.71■□□□□ 0.43
VEGFA-207ENST00000413642 C10orf126Q8N4M7 172 aa17.71■□□□□ 0.43
VEGFA-207ENST00000413642 ERVFC1-1P60608 527 aa17.7■□□□□ 0.42
VEGFA-207ENST00000413642 CENPWQ5EE01 88 aa17.7■□□□□ 0.42
VEGFA-207ENST00000413642 A0A087WTM6 91 aa17.69■□□□□ 0.42
VEGFA-207ENST00000413642 TEX46H3BTG2 121 aa17.69■□□□□ 0.42
VEGFA-207ENST00000413642 IGLV2-8P01709 118 aa17.69■□□□□ 0.42
VEGFA-207ENST00000413642 SSTP61278 116 aa17.68■□□□□ 0.42
VEGFA-207ENST00000413642 PCLOQ9Y6V0 5065 aa17.68■□□□□ 0.42
VEGFA-207ENST00000413642 IBA57-AS1B1ANH7 110 aa17.67■□□□□ 0.42
VEGFA-207ENST00000413642 CXCL1P09341 107 aa17.67■□□□□ 0.42
VEGFA-207ENST00000413642 SSBP4Q9BWG4 385 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-207ENST00000413642 Q9HAA7 133 aa17.67■□□□□ 0.42
VEGFA-207ENST00000413642 SNAI2O43623 268 aa17.66■□□□□ 0.42
VEGFA-207ENST00000413642 CDK2AP2O75956 126 aa17.66■□□□□ 0.42
VEGFA-207ENST00000413642 MEF2BQ02080 365 aaPredicted RBP17.66■□□□□ 0.42
VEGFA-207ENST00000413642 KRTAP4-5Q9BYR2 181 aa17.66■□□□□ 0.42
VEGFA-207ENST00000413642 GZMBP10144 247 aa17.65■□□□□ 0.42
VEGFA-207ENST00000413642 BCL2P10415 239 aa17.65■□□□□ 0.42
VEGFA-207ENST00000413642 MED9Q9NWA0 146 aa17.65■□□□□ 0.42
VEGFA-207ENST00000413642 EREGO14944 169 aa17.64■□□□□ 0.41
VEGFA-207ENST00000413642 IFNA1P01562 189 aa17.63■□□□□ 0.41
VEGFA-207ENST00000413642 OR5AL1P0C617 328 aa17.63■□□□□ 0.41
VEGFA-207ENST00000413642 TRBV20OR9-2A0A075B6H5 130 aa17.62■□□□□ 0.41
VEGFA-207ENST00000413642 PDE6DO43924 150 aa17.62■□□□□ 0.41
VEGFA-207ENST00000413642 SPANXN1Q5VSR9 72 aa17.62■□□□□ 0.41
VEGFA-207ENST00000413642 PGPEP1Q9NXJ5 209 aa17.62■□□□□ 0.41
VEGFA-207ENST00000413642 RBFOX3A6NFN3 312 aa17.61■□□□□ 0.41
VEGFA-207ENST00000413642 GNG4P50150 75 aa17.61■□□□□ 0.41
VEGFA-207ENST00000413642 ALKAL2Q6UX46 152 aa17.61■□□□□ 0.41
VEGFA-207ENST00000413642 OR2D3Q8NGH3 330 aa17.61■□□□□ 0.41
VEGFA-207ENST00000413642 VAX2Q9UIW0 290 aa17.61■□□□□ 0.41
VEGFA-207ENST00000413642 HSPG2P98160 4391 aa17.61■□□□□ 0.41
VEGFA-207ENST00000413642 DNAH5Q8TE73 4624 aa17.6■□□□□ 0.41
VEGFA-207ENST00000413642 C19orf71A6NCJ1 209 aa17.6■□□□□ 0.41
VEGFA-207ENST00000413642 ZNF56Q15929 161 aa17.6■□□□□ 0.41
VEGFA-207ENST00000413642 DAZ4Q86SG3 579 aaKnown RBP17.6■□□□□ 0.41
VEGFA-207ENST00000413642 DAZ3Q9NR90 486 aaKnown RBP17.6■□□□□ 0.41
VEGFA-207ENST00000413642 BOLA1Q9Y3E2 137 aa17.6■□□□□ 0.41
VEGFA-207ENST00000413642 A0A087WWC5 75 aa17.59■□□□□ 0.41
VEGFA-207ENST00000413642 TRBV10-1A0A0K0K1A3 114 aa17.59■□□□□ 0.41
VEGFA-207ENST00000413642 A0A1B0GVG6 124 aa17.59■□□□□ 0.41
VEGFA-207ENST00000413642 PSCAO43653 123 aa17.59■□□□□ 0.41
VEGFA-207ENST00000413642 RAB4BP61018 213 aa17.59■□□□□ 0.41
VEGFA-207ENST00000413642 DAZAP1Q96EP5 407 aaKnown RBP17.59■□□□□ 0.41
VEGFA-207ENST00000413642 LRCOL1A6NCL2 159 aa17.58■□□□□ 0.4
VEGFA-207ENST00000413642 UBE2D3P61077 147 aa17.58■□□□□ 0.4
VEGFA-207ENST00000413642 UBE2D2P62837 147 aa17.58■□□□□ 0.4
VEGFA-207ENST00000413642 RPL36AP83881 106 aaKnown RBP17.58■□□□□ 0.4
VEGFA-207ENST00000413642 RPL36ALQ969Q0 106 aaKnown RBP17.58■□□□□ 0.4
VEGFA-207ENST00000413642 TPPP3Q9BW30 176 aa17.58■□□□□ 0.4
VEGFA-207ENST00000413642 IGLC6P0CF74 106 aa17.57■□□□□ 0.4
VEGFA-207ENST00000413642 NKX2-5P52952 324 aaPredicted RBP17.57■□□□□ 0.4
VEGFA-207ENST00000413642 MAPKAPK5-AS1Q8N8E1 139 aa17.57■□□□□ 0.4
VEGFA-207ENST00000413642 NEXN-AS1Q8NBZ9 246 aa17.57■□□□□ 0.4
VEGFA-207ENST00000413642 KIF25-AS1Q9Y6Z4 181 aa17.57■□□□□ 0.4
VEGFA-207ENST00000413642 APOBP04114 4563 aaKnown RBP17.57■□□□□ 0.4
VEGFA-207ENST00000413642 TRBV7-3A0A075B6L6 115 aa17.56■□□□□ 0.4
VEGFA-207ENST00000413642 F5H697 171 aa17.56■□□□□ 0.4
VEGFA-207ENST00000413642 ABCA13Q86UQ4 5058 aa17.55■□□□□ 0.4
VEGFA-207ENST00000413642 FER1L6-AS1Q8NA97 138 aa17.55■□□□□ 0.4
VEGFA-207ENST00000413642 OR10G8Q8NGN5 311 aa17.55■□□□□ 0.4
VEGFA-207ENST00000413642 SMIM12Q96EX1 92 aa17.55■□□□□ 0.4
VEGFA-207ENST00000413642 P01737 135 aa17.54■□□□□ 0.4
VEGFA-207ENST00000413642 KRTAP10-1P60331 282 aa17.54■□□□□ 0.4
VEGFA-207ENST00000413642 RPS20P60866 119 aaKnown RBP17.54■□□□□ 0.4
VEGFA-207ENST00000413642 CDPF1Q6NVV7 123 aa17.54■□□□□ 0.4
VEGFA-207ENST00000413642 NIT1Q86X76 327 aa17.54■□□□□ 0.4
VEGFA-207ENST00000413642 DNAJC30Q96LL9 226 aa17.54■□□□□ 0.4
VEGFA-207ENST00000413642 LAGE3Q14657 143 aa17.53■□□□□ 0.4
VEGFA-207ENST00000413642 AP1S3Q96PC3 154 aa17.52■□□□□ 0.4
VEGFA-207ENST00000413642 TAGLN2P37802 199 aaKnown RBP17.51■□□□□ 0.39
VEGFA-207ENST00000413642 BLOC1S1P78537 153 aa17.51■□□□□ 0.39
VEGFA-207ENST00000413642 WFDC2Q14508 124 aa17.51■□□□□ 0.39
VEGFA-207ENST00000413642 NUDT10Q8NFP7 164 aa17.51■□□□□ 0.39
VEGFA-207ENST00000413642 NUDT11Q96G61 164 aa17.51■□□□□ 0.39
VEGFA-207ENST00000413642 K7EN84 100 aa17.5■□□□□ 0.39
VEGFA-207ENST00000413642 SMIM17P0DL12 118 aa17.5■□□□□ 0.39
VEGFA-207ENST00000413642 OCC1Q8TAD7 63 aa17.5■□□□□ 0.39
VEGFA-207ENST00000413642 LYZL1Q6UWQ5 148 aa17.49■□□□□ 0.39
VEGFA-207ENST00000413642 KLK12Q9UKR0 248 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms