RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 MORN3Q6PF18 240 aaPredicted RBP14.21□□□□□ -0.13
TNFRSF8-202ENST00000413146 DEFB104AQ8WTQ1 72 aa14.21□□□□□ -0.13
TNFRSF8-202ENST00000413146 PGPEP1Q9NXJ5 209 aa14.21□□□□□ -0.13
TNFRSF8-202ENST00000413146 MSMBP08118 114 aa14.2□□□□□ -0.14
TNFRSF8-202ENST00000413146 TMEM141Q96I45 108 aa14.2□□□□□ -0.14
TNFRSF8-202ENST00000413146 MRPL16Q9NX20 251 aaKnown RBP14.2□□□□□ -0.14
TNFRSF8-202ENST00000413146 EMP1P54849 157 aa14.2□□□□□ -0.14
TNFRSF8-202ENST00000413146 RPL39P62891 51 aaKnown RBP14.2□□□□□ -0.14
TNFRSF8-202ENST00000413146 IGHV4-30-2A0A087WSY4 118 aa14.19□□□□□ -0.14
TNFRSF8-202ENST00000413146 SDHAF1A6NFY7 115 aa14.19□□□□□ -0.14
TNFRSF8-202ENST00000413146 KLHL30-AS1Q8NEE0 82 aa14.19□□□□□ -0.14
TNFRSF8-202ENST00000413146 ATP5J2P56134 94 aa14.19□□□□□ -0.14
TNFRSF8-202ENST00000413146 ETDBQ3ZM63 59 aa14.19□□□□□ -0.14
TNFRSF8-202ENST00000413146 FAM74A4Q5TZK3 123 aa14.19□□□□□ -0.14
TNFRSF8-202ENST00000413146 TIMM17AQ99595 171 aa14.19□□□□□ -0.14
TNFRSF8-202ENST00000413146 TMEM238C9JI98 176 aa14.18□□□□□ -0.14
TNFRSF8-202ENST00000413146 MTURNQ8N3F0 131 aa14.18□□□□□ -0.14
TNFRSF8-202ENST00000413146 LGALS9O00182 355 aa14.18□□□□□ -0.14
TNFRSF8-202ENST00000413146 SH2D6Q7Z4S9 175 aa14.18□□□□□ -0.14
TNFRSF8-202ENST00000413146 ZNF688P0C7X2 276 aa14.17□□□□□ -0.14
TNFRSF8-202ENST00000413146 TRBV27A0A0K0K1C4 114 aa14.17□□□□□ -0.14
TNFRSF8-202ENST00000413146 PRO0461Q9UI25 63 aa14.17□□□□□ -0.14
TNFRSF8-202ENST00000413146 UBE2D1P51668 147 aa14.16□□□□□ -0.14
TNFRSF8-202ENST00000413146 SYT8Q8NBV8 401 aa14.16□□□□□ -0.14
TNFRSF8-202ENST00000413146 ODF3Q96PU9 254 aa14.16□□□□□ -0.14
TNFRSF8-202ENST00000413146 IGHV3-16A0A0C4DH30 117 aa14.16□□□□□ -0.14
TNFRSF8-202ENST00000413146 TRBV6-5A0A0K0K1A5 114 aa14.16□□□□□ -0.14
TNFRSF8-202ENST00000413146 ZNF56Q15929 161 aa14.16□□□□□ -0.14
TNFRSF8-202ENST00000413146 TMEM170BQ5T4T1 132 aa14.16□□□□□ -0.14
TNFRSF8-202ENST00000413146 C9orf85Q96MD7 179 aa14.16□□□□□ -0.14
TNFRSF8-202ENST00000413146 TSSC4Q9Y5U2 329 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF8-202ENST00000413146 IGKV3-20P01619 116 aa14.15□□□□□ -0.14
TNFRSF8-202ENST00000413146 SNRPD3P62318 126 aaKnown RBP14.15□□□□□ -0.14
TNFRSF8-202ENST00000413146 ZNF256Q9Y2P7 627 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF8-202ENST00000413146 TRAV12-2A0A075B6T6 113 aa14.15□□□□□ -0.14
TNFRSF8-202ENST00000413146 A0A0J9YY99 117 aa14.15□□□□□ -0.14
TNFRSF8-202ENST00000413146 PSMB8P28062 276 aa14.15□□□□□ -0.14
TNFRSF8-202ENST00000413146 DLX4Q92988 240 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF8-202ENST00000413146 ZNF580Q9UK33 172 aa14.14□□□□□ -0.15
TNFRSF8-202ENST00000413146 VPS13CQ709C8 3753 aa14.14□□□□□ -0.15
TNFRSF8-202ENST00000413146 SPAG8Q99932 426 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF8-202ENST00000413146 MDFICQ9P1T7 246 aa14.14□□□□□ -0.15
TNFRSF8-202ENST00000413146 PKD1L2Q7Z442 2459 aa14.13□□□□□ -0.15
TNFRSF8-202ENST00000413146 A0A0J9YX75 114 aa14.13□□□□□ -0.15
TNFRSF8-202ENST00000413146 APOMO95445 188 aa14.13□□□□□ -0.15
TNFRSF8-202ENST00000413146 TSPAN13O95857 204 aa14.13□□□□□ -0.15
TNFRSF8-202ENST00000413146 AVPP01185 164 aa14.13□□□□□ -0.15
TNFRSF8-202ENST00000413146 ZNF876PQ49A33 203 aa14.13□□□□□ -0.15
TNFRSF8-202ENST00000413146 SIGMAR1Q99720 223 aa14.13□□□□□ -0.15
TNFRSF8-202ENST00000413146 GAGE12HA6NDE8 117 aa14.12□□□□□ -0.15
TNFRSF8-202ENST00000413146 Q8N1Y9 231 aa14.12□□□□□ -0.15
TNFRSF8-202ENST00000413146 GTSF1LQ9H1H1 148 aa14.12□□□□□ -0.15
TNFRSF8-202ENST00000413146 LOC107984156A0A0G2JMH3 177 aa14.12□□□□□ -0.15
TNFRSF8-202ENST00000413146 B4DSR2 109 aa14.12□□□□□ -0.15
TNFRSF8-202ENST00000413146 ARL17AQ8IVW1 177 aa14.12□□□□□ -0.15
TNFRSF8-202ENST00000413146 ZNRF2Q8NHG8 242 aa14.12□□□□□ -0.15
TNFRSF8-202ENST00000413146 TSPEAR-AS2P59090 65 aa14.11□□□□□ -0.15
TNFRSF8-202ENST00000413146 IGHV1OR15-1A0A075B7D0 117 aa14.11□□□□□ -0.15
TNFRSF8-202ENST00000413146 M0QY20 66 aa14.11□□□□□ -0.15
TNFRSF8-202ENST00000413146 AZU1P20160 251 aa14.11□□□□□ -0.15
TNFRSF8-202ENST00000413146 LYRM7Q5U5X0 104 aa14.11□□□□□ -0.15
TNFRSF8-202ENST00000413146 TRPT1Q86TN4 253 aaKnown RBP14.11□□□□□ -0.15
TNFRSF8-202ENST00000413146 RHOHQ15669 191 aa14.1□□□□□ -0.15
TNFRSF8-202ENST00000413146 NSUN5P1Q3KNT7 163 aa14.1□□□□□ -0.15
TNFRSF8-202ENST00000413146 SFTA2Q6UW10 78 aa14.1□□□□□ -0.15
TNFRSF8-202ENST00000413146 ITPR1Q14643 2758 aa14.1□□□□□ -0.15
TNFRSF8-202ENST00000413146 K7EQG2 157 aa14.1□□□□□ -0.15
TNFRSF8-202ENST00000413146 IGHV4-59P01825 116 aa14.1□□□□□ -0.15
TNFRSF8-202ENST00000413146 LGALS3P17931 250 aaKnown RBP14.1□□□□□ -0.15
TNFRSF8-202ENST00000413146 SPINK13Q1W4C9 94 aa14.1□□□□□ -0.15
TNFRSF8-202ENST00000413146 C10orf99Q6UWK7 81 aa14.1□□□□□ -0.15
TNFRSF8-202ENST00000413146 PSMB2P49721 201 aa14.09□□□□□ -0.15
TNFRSF8-202ENST00000413146 NDUFA11Q86Y39 141 aa14.09□□□□□ -0.15
TNFRSF8-202ENST00000413146 J3QQQ9 107 aa14.09□□□□□ -0.15
TNFRSF8-202ENST00000413146 CFAP126Q5VTH2 177 aa14.09□□□□□ -0.15
TNFRSF8-202ENST00000413146 SLC25A29Q8N8R3 303 aa14.09□□□□□ -0.15
TNFRSF8-202ENST00000413146 SPATA25Q9BR10 227 aa14.09□□□□□ -0.15
TNFRSF8-202ENST00000413146 IGHV3-30P01768 117 aa14.08□□□□□ -0.16
TNFRSF8-202ENST00000413146 IGHV3-30-5P0DP03 117 aa14.08□□□□□ -0.16
TNFRSF8-202ENST00000413146 UBE2D3P61077 147 aa14.08□□□□□ -0.16
TNFRSF8-202ENST00000413146 UBE2D2P62837 147 aa14.08□□□□□ -0.16
TNFRSF8-202ENST00000413146 SMAGPQ0VAQ4 97 aa14.08□□□□□ -0.16
TNFRSF8-202ENST00000413146 NFE4Q86UQ8 179 aa14.08□□□□□ -0.16
TNFRSF8-202ENST00000413146 TMEM89A2RUT3 159 aa14.07□□□□□ -0.16
TNFRSF8-202ENST00000413146 SCGB1A1P11684 91 aa14.07□□□□□ -0.16
TNFRSF8-202ENST00000413146 GATA3P23771 443 aa14.07□□□□□ -0.16
TNFRSF8-202ENST00000413146 INSL3P51460 131 aa14.07□□□□□ -0.16
TNFRSF8-202ENST00000413146 DEFB112Q30KQ8 113 aa14.07□□□□□ -0.16
TNFRSF8-202ENST00000413146 OPRPNQ99935 248 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF8-202ENST00000413146 C1QTNF4Q9BXJ3 329 aa14.07□□□□□ -0.16
TNFRSF8-202ENST00000413146 SYNJ2BPP57105 145 aa14.06□□□□□ -0.16
TNFRSF8-202ENST00000413146 ATP6V0E2Q8NHE4 81 aa14.05□□□□□ -0.16
TNFRSF8-202ENST00000413146 AMELXQ99217 191 aa14.05□□□□□ -0.16
TNFRSF8-202ENST00000413146 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.05□□□□□ -0.161e-6■■■□□ 17.4
TNFRSF8-202ENST00000413146 I3L3M4 83 aa14.05□□□□□ -0.16
TNFRSF8-202ENST00000413146 CFC1BP0CG36 223 aa14.04□□□□□ -0.16
TNFRSF8-202ENST00000413146 CFC1P0CG37 223 aa14.04□□□□□ -0.16
TNFRSF8-202ENST00000413146 SMCPP49901 116 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF8-202ENST00000413146 C20orf203Q8NBC4 194 aa14.04□□□□□ -0.16
TNFRSF8-202ENST00000413146 ACACBO00763 2458 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms