RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 Q8N9L7 120 aa3.93□□□□□ -1.78
R3HDM1-204ENST00000410054 ARRDC1-AS1Q9H2J1 176 aa3.93□□□□□ -1.78
R3HDM1-204ENST00000410054 TP53TG3Q9ULZ0 132 aa3.93□□□□□ -1.78
R3HDM1-204ENST00000410054 MED12LQ86YW9 2145 aa3.93□□□□□ -1.78
R3HDM1-204ENST00000410054 HEATR5AQ86XA9 2040 aa3.93□□□□□ -1.78
R3HDM1-204ENST00000410054 C1orf134Q5TEV5 83 aa3.93□□□□□ -1.78
R3HDM1-204ENST00000410054 TMEM14BQ9NUH8 114 aa3.93□□□□□ -1.78
R3HDM1-204ENST00000410054 ZNF581Q9P0T4 197 aa3.93□□□□□ -1.78
R3HDM1-204ENST00000410054 RTTNQ86VV8 2226 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 IGHV3-74A0A0B4J1X5 117 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 CXorf51AA0A1B0GTR3 108 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 Q8NA96 180 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 CYYR1Q96J86 154 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 RGPD3A6NKT7 1758 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 RGPD4Q7Z3J3 1758 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 IGKV1D-43A0A0B4J1Z2 117 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 IGKV1-16P04430 117 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 IGFL2Q6UWQ7 119 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 C6orf223Q8N319 242 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 DOPEY2Q9Y3R5 2298 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 NACAE9PAV3 2078 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 CADP27708 2225 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 ICE1Q9Y2F5 2266 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 PRO0461Q9UI25 63 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 IGKV3OR2-268A0A0C4DH90 116 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 I3L3M4 83 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 ITGBL1O95965 494 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 CFPP27918 469 aa3.92□□□□□ -1.78
R3HDM1-204ENST00000410054 NCKAP5O14513 1909 aa3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 RELNP78509 3460 aa3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 IGKV2D-26A0A0A0MRZ7 120 aa3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 Q6ZR03 302 aa3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 HIGD2AQ9BW72 106 aa3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 COL11A2P13942 1736 aaPredicted RBP3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 HCFC1P51610 2035 aa3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 CHTF8P0CG12 524 aa3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 SLX4Q8IY92 1834 aa3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 ZSWIM8A7E2V4 1837 aa3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 IGHV4-30-2A0A087WSY4 118 aa3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 RPL37AP8A6NKH3 93 aa3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 ZNF497Q6ZNH5 498 aa3.91□□□□□ -1.78
R3HDM1-204ENST00000410054 SDK1Q7Z5N4 2213 aa3.9□□□□□ -1.78
R3HDM1-204ENST00000410054 TRBV10-1A0A0K0K1A3 114 aa3.9□□□□□ -1.78
R3HDM1-204ENST00000410054 C11orf86A6NJI1 115 aa3.9□□□□□ -1.78
R3HDM1-204ENST00000410054 FSHBP01225 129 aa3.9□□□□□ -1.78
R3HDM1-204ENST00000410054 IGHV3-30-3P0DP02 117 aa3.9□□□□□ -1.78
R3HDM1-204ENST00000410054 SMIM2Q9BVW6 85 aa3.9□□□□□ -1.78
R3HDM1-204ENST00000410054 UBE2D4Q9Y2X8 147 aa3.9□□□□□ -1.78
R3HDM1-204ENST00000410054 C9orf66Q5T8R8 295 aa3.9□□□□□ -1.78
R3HDM1-204ENST00000410054 LINC01465Q8N7H1 131 aa3.9□□□□□ -1.78
R3HDM1-204ENST00000410054 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.9□□□□□ -1.78
R3HDM1-204ENST00000410054 COL2A1P02458 1487 aaPredicted RBP3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 TRAV22A0A0B4J277 110 aa3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 DEFB108AA8MXU0 73 aa3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 ZNF883P0CG24 379 aa3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 PRR3P79522 188 aaKnown RBP3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 LY6G5CQ5SRR4 150 aa3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 Q6ZQY7 126 aa3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 Q8N3U1 123 aa3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 CFAP54Q96N23 3096 aa3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 TNCP24821 2201 aa3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 SMCHD1A6NHR9 2005 aa3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 INTS1Q8N201 2190 aaKnown RBP3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 IGKV3D-11A0A0A0MRZ8 115 aa3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 IGKV3-11P04433 115 aa3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 PRR14LQ5THK1 2151 aa3.9□□□□□ -1.79
R3HDM1-204ENST00000410054 SCN2AQ99250 2005 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 LINC01555Q8NAE3 123 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 COX7B2Q8TF08 81 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 SLURP2P0DP57 97 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 CMC4P56277 68 aaPredicted RBP3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 PIGYQ3MUY2 71 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV4OR15-8A0A075B7B6 117 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 LOC101927531A0A1B0GV80 90 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 SMCPP49901 116 aaPredicted RBP3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 CLLU1OSQ5K130 101 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 SND1-IT1Q9HBX3 110 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 LINC00588Q9Y4M8 146 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 FREM1Q5H8C1 2179 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 SCN4AP35499 1836 aa3.89□□□□□ -1.79
R3HDM1-204ENST00000410054 INAFM1C9JVW0 142 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 C11orf72Q8NBR9 251 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 BRWD1Q9NSI6 2320 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 NUP214P35658 2090 aaPredicted RBP3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV3-43A0A0B4J1X8 118 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 A0A0J9YY99 117 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV3-43DP0DP04 118 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 FOLR3P41439 243 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 UNQ9165/PRO28630Q6UXU0 137 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 MINOS1-NBL1R4GNA1 71 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 SORL1Q92673 2214 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 IGKV3D-15A0A087WSY6 115 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV3-21A0A0B4J1V1 117 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 SMIM1B2RUZ4 78 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 IGKV3-15P01624 115 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 IGHV4-30-4P0DP06 118 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 UBE2D1P51668 147 aa3.88□□□□□ -1.79
R3HDM1-204ENST00000410054 U3KQK5 164 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms