RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SONP18583 2426 aaKnown RBP6.54□□□□□ -1.36
SCN9A-203ENST00000409672 COL5A1P20908 1838 aaPredicted RBP6.54□□□□□ -1.36
SCN9A-203ENST00000409672 UTF1Q5T230 341 aa6.54□□□□□ -1.36
SCN9A-203ENST00000409672 FAM19A5Q7Z5A7 132 aaPredicted RBP6.54□□□□□ -1.36
SCN9A-203ENST00000409672 Q8N1Y9 231 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 Q8TCH9 128 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 C10orf105Q8TEF2 133 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 ZNF843Q8N446 348 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 C5orf56Q8N8D9 126 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 PPDPFQ9H3Y8 114 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 GAGE12HA6NDE8 117 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 H3BMG7 143 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 IGF2-ASQ6U949 168 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 CEND1Q8N111 149 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 C19orf84I3L1E1 186 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 IGF1P05019 195 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 NDUFA1O15239 70 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 LTAP01374 205 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 UBE2D3P61077 147 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 RPL39P62891 51 aaKnown RBP6.53□□□□□ -1.36
SCN9A-203ENST00000409672 LHFPL1Q86WI0 220 aa6.53□□□□□ -1.36
SCN9A-203ENST00000409672 HILS1P60008 231 aa6.52□□□□□ -1.36
SCN9A-203ENST00000409672 SPAG11BQ08648 103 aa6.52□□□□□ -1.36
SCN9A-203ENST00000409672 Q6ZWC4 215 aa6.52□□□□□ -1.36
SCN9A-203ENST00000409672 PCP2Q8IVA1 136 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 ZNF524Q96C55 264 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 SND1-IT1Q9HBX3 110 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 ZFP2Q6ZN57 461 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 C4orf3Q8WVX3 66 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 PRO1854Q9UHT4 67 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 PKIGQ9Y2B9 76 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 ZNF491Q8N8L2 437 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 OR11H6Q8NGC7 330 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 CYTL1Q9NRR1 136 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 IGHV7-81A0A0B4J1V7 117 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 LINC00269Q8N2A0 174 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 NREPQ16612 68 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 IGLC1P0CG04 106 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 DAZ2Q13117 558 aaKnown RBP6.52□□□□□ -1.37
SCN9A-203ENST00000409672 DAZ4Q86SG3 579 aaKnown RBP6.52□□□□□ -1.37
SCN9A-203ENST00000409672 FXYD5Q96DB9 178 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 DAZ3Q9NR90 486 aaKnown RBP6.52□□□□□ -1.37
SCN9A-203ENST00000409672 PLA2G2EQ9NZK7 142 aa6.52□□□□□ -1.37
SCN9A-203ENST00000409672 C15orf65H3BRN8 121 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 MAJINQ3KP22 176 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 FAM19A1Q7Z5A9 133 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 C9orf85Q96MD7 179 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 LY96Q9Y6Y9 160 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 CSPG4Q6UVK1 2322 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 AGPAT4-IT1Q9H0P7 198 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 IL17DQ8TAD2 202 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 EML5Q05BV3 1969 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 TRBV7-3A0A075B6L6 115 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 MPLKIPQ8TAP9 179 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 SLX1AQ9BQ83 275 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 QRFPP83859 136 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 IGKV2D-26A0A0A0MRZ7 120 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 LINC01559Q495D7 138 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 ANKRD29Q8N6D5 301 aa6.51□□□□□ -1.37
SCN9A-203ENST00000409672 MPZP25189 248 aa6.5□□□□□ -1.37
SCN9A-203ENST00000409672 A0A1B0GX51 115 aa6.5□□□□□ -1.37
SCN9A-203ENST00000409672 IGLV1-44P01699 117 aa6.5□□□□□ -1.37
SCN9A-203ENST00000409672 CEMP1Q6PRD7 247 aaPredicted RBP6.5□□□□□ -1.37
SCN9A-203ENST00000409672 GFRA4Q9GZZ7 299 aa6.5□□□□□ -1.37
SCN9A-203ENST00000409672 CCL25O15444 150 aa6.5□□□□□ -1.37
SCN9A-203ENST00000409672 WISP2O76076 250 aa6.5□□□□□ -1.37
SCN9A-203ENST00000409672 MDFICQ9P1T7 246 aa6.5□□□□□ -1.37
SCN9A-203ENST00000409672 GPR179Q6PRD1 2367 aa6.5□□□□□ -1.37
SCN9A-203ENST00000409672 Q8N9W7 124 aa6.5□□□□□ -1.37
SCN9A-203ENST00000409672 IGLV2-8P01709 118 aa6.5□□□□□ -1.37
SCN9A-203ENST00000409672 HIVEP2P31629 2446 aa6.5□□□□□ -1.37
SCN9A-203ENST00000409672 C18orf32Q8TCD1 76 aa6.5□□□□□ -1.37
SCN9A-203ENST00000409672 IGLV9-49A0A0B4J1Y8 123 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 WFDC10BQ8IUB3 73 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 LYL1P12980 280 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 TRBV20-1A0A075B6N2 111 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 TMEM61Q8N0U2 210 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 TP53TG3Q9ULZ0 132 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 TRBV6-6A0A0A6YYG2 114 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 X6R8D5 127 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 COL4A3Q01955 1670 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 OPRPNQ99935 248 aaPredicted RBP6.49□□□□□ -1.37
SCN9A-203ENST00000409672 F8VRH5 84 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 TMEM258P61165 79 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 FAM222AQ5U5X8 452 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 DCANP1Q8TF63 244 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 RETNLBQ9BQ08 111 aa6.49□□□□□ -1.37
SCN9A-203ENST00000409672 IFITM1P13164 125 aa6.48□□□□□ -1.37
SCN9A-203ENST00000409672 BVES-AS1Q5T3Y7 98 aa6.48□□□□□ -1.37
SCN9A-203ENST00000409672 C7orf33Q8WU49 177 aa6.48□□□□□ -1.37
SCN9A-203ENST00000409672 ZNF492Q9P255 531 aa6.48□□□□□ -1.37
SCN9A-203ENST00000409672 UNQ9165/PRO28630Q6UXU0 137 aa6.48□□□□□ -1.37
SCN9A-203ENST00000409672 ADAMTS20P59510 1910 aa6.48□□□□□ -1.37
SCN9A-203ENST00000409672 PRAC2D3DTV9 90 aa6.48□□□□□ -1.37
SCN9A-203ENST00000409672 MSRB1Q9NZV6 116 aa6.48□□□□□ -1.37
SCN9A-203ENST00000409672 MYCNOSP40205 109 aa6.48□□□□□ -1.37
SCN9A-203ENST00000409672 LINC00526Q96FQ7 95 aa6.48□□□□□ -1.37
SCN9A-203ENST00000409672 SCXQ7RTU7 201 aa6.48□□□□□ -1.37
SCN9A-203ENST00000409672 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.47□□□□□ -1.37
SCN9A-203ENST00000409672 UTRNP46939 3433 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms