RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 ODF3BA8MYP8 253 aa19.25■□□□□ 0.67
SPIRE1-202ENST00000409402 TRBV12-3P01733 135 aa19.24■□□□□ 0.67
SPIRE1-202ENST00000409402 LYPD6BQ8NI32 183 aa19.24■□□□□ 0.67
SPIRE1-202ENST00000409402 DEFB105AQ8NG35 78 aa19.24■□□□□ 0.67
SPIRE1-202ENST00000409402 MRPL36Q9P0J6 103 aaKnown RBP19.24■□□□□ 0.67
SPIRE1-202ENST00000409402 UNQ9165/PRO28630Q6UXU0 137 aa19.23■□□□□ 0.67
SPIRE1-202ENST00000409402 DOCK11Q5JSL3 2073 aa19.23■□□□□ 0.67
SPIRE1-202ENST00000409402 BVES-AS1Q5T3Y7 98 aa19.23■□□□□ 0.67
SPIRE1-202ENST00000409402 PRSS47A8MTI9 375 aa19.23■□□□□ 0.67
SPIRE1-202ENST00000409402 E7EUB6 86 aa19.23■□□□□ 0.67
SPIRE1-202ENST00000409402 FAM167A-AS1Q96KT0 104 aa19.23■□□□□ 0.67
SPIRE1-202ENST00000409402 MED14OSP0DP75 135 aa19.22■□□□□ 0.67
SPIRE1-202ENST00000409402 SIVA1O15304 175 aa19.22■□□□□ 0.67
SPIRE1-202ENST00000409402 CARD19Q96LW7 228 aa19.22■□□□□ 0.67
SPIRE1-202ENST00000409402 MSRB1Q9NZV6 116 aa19.22■□□□□ 0.67
SPIRE1-202ENST00000409402 INAFM1C9JVW0 142 aa19.22■□□□□ 0.67
SPIRE1-202ENST00000409402 IGLL5B9A064 214 aa19.21■□□□□ 0.67
SPIRE1-202ENST00000409402 IGHG4P01861 327 aa19.21■□□□□ 0.67
SPIRE1-202ENST00000409402 TMEM263Q8WUH6 116 aaKnown RBP19.21■□□□□ 0.67
SPIRE1-202ENST00000409402 KMT2EQ8IZD2 1858 aa19.21■□□□□ 0.67
SPIRE1-202ENST00000409402 IGLV2-14P01704 120 aa19.21■□□□□ 0.67
SPIRE1-202ENST00000409402 DEFB125Q8N687 156 aa19.21■□□□□ 0.67
SPIRE1-202ENST00000409402 FANCD2OSQ96PS1 177 aa19.21■□□□□ 0.67
SPIRE1-202ENST00000409402 MAP6D1Q9H9H5 199 aa19.2■□□□□ 0.66
SPIRE1-202ENST00000409402 A0A0J9YX75 114 aa19.19■□□□□ 0.66
SPIRE1-202ENST00000409402 NDUFA1O15239 70 aa19.19■□□□□ 0.66
SPIRE1-202ENST00000409402 COX7B2Q8TF08 81 aa19.19■□□□□ 0.66
SPIRE1-202ENST00000409402 HIST2H2BCQ6DN03 193 aa19.18■□□□□ 0.66
SPIRE1-202ENST00000409402 PPDPFLQ8WWR9 84 aa19.18■□□□□ 0.66
SPIRE1-202ENST00000409402 hADV29S1A0JD25 119 aa19.17■□□□□ 0.66
SPIRE1-202ENST00000409402 VSIG2Q96IQ7 327 aa19.16■□□□□ 0.66
SPIRE1-202ENST00000409402 GTSF1LQ9H1H1 148 aa19.16■□□□□ 0.66
SPIRE1-202ENST00000409402 PRO0255Q9UI72 69 aa19.16■□□□□ 0.66
SPIRE1-202ENST00000409402 DEFB1P60022 68 aa19.16■□□□□ 0.66
SPIRE1-202ENST00000409402 C11orf45Q8TAV5 145 aa19.16■□□□□ 0.66
SPIRE1-202ENST00000409402 ORMDL1Q9P0S3 153 aa19.16■□□□□ 0.66
SPIRE1-202ENST00000409402 A0A0J9YXV3 536 aa19.16■□□□□ 0.66
SPIRE1-202ENST00000409402 IGHV4-4A0A075B6R2 117 aa19.15■□□□□ 0.66
SPIRE1-202ENST00000409402 TMEM131Q92545 1883 aa19.15■□□□□ 0.66
SPIRE1-202ENST00000409402 TINCRA0A1B0GVN0 87 aa19.15■□□□□ 0.66
SPIRE1-202ENST00000409402 F8W1H4 67 aa19.14■□□□□ 0.66
SPIRE1-202ENST00000409402 FSTL3O95633 263 aa19.14■□□□□ 0.66
SPIRE1-202ENST00000409402 IFITM1P13164 125 aa19.14■□□□□ 0.65
SPIRE1-202ENST00000409402 CCDC140Q96MF4 163 aa19.14■□□□□ 0.65
SPIRE1-202ENST00000409402 LINC00574Q9H8X3 128 aa19.14■□□□□ 0.65
SPIRE1-202ENST00000409402 CFC1BP0CG36 223 aa19.14■□□□□ 0.65
SPIRE1-202ENST00000409402 CFC1P0CG37 223 aa19.14■□□□□ 0.65
SPIRE1-202ENST00000409402 KLK12Q9UKR0 248 aa19.13■□□□□ 0.65
SPIRE1-202ENST00000409402 HIVEP2P31629 2446 aa19.13■□□□□ 0.65
SPIRE1-202ENST00000409402 K7ERJ3 54 aa19.12■□□□□ 0.65
SPIRE1-202ENST00000409402 IGF1P05019 195 aa19.12■□□□□ 0.65
SPIRE1-202ENST00000409402 SHANK1Q9Y566 2161 aa19.12■□□□□ 0.65
SPIRE1-202ENST00000409402 SHISA2Q6UWI4 295 aa19.12■□□□□ 0.65
SPIRE1-202ENST00000409402 SND1-IT1Q9HBX3 110 aa19.12■□□□□ 0.65
SPIRE1-202ENST00000409402 NDUFS5O43920 106 aa19.11■□□□□ 0.65
SPIRE1-202ENST00000409402 C12orf74Q32Q52 190 aa19.11■□□□□ 0.65
SPIRE1-202ENST00000409402 UBE2AP49459 152 aa19.11■□□□□ 0.65
SPIRE1-202ENST00000409402 LINC01545Q5VT33 79 aa19.11■□□□□ 0.65
SPIRE1-202ENST00000409402 K7EP34 96 aa19.1■□□□□ 0.65
SPIRE1-202ENST00000409402 LGALS9O00182 355 aa19.1■□□□□ 0.65
SPIRE1-202ENST00000409402 TRAV12-1A0A0B4J245 112 aa19.1■□□□□ 0.65
SPIRE1-202ENST00000409402 LINC01548A6NM66 108 aa19.1■□□□□ 0.65
SPIRE1-202ENST00000409402 COL4A4P53420 1690 aaPredicted RBP19.1■□□□□ 0.65
SPIRE1-202ENST00000409402 COL4A3Q01955 1670 aa19.1■□□□□ 0.65
SPIRE1-202ENST00000409402 CXCL5P42830 114 aa19.1■□□□□ 0.65
SPIRE1-202ENST00000409402 TRBV6-1A0A0K0K1D8 114 aa19.1■□□□□ 0.65
SPIRE1-202ENST00000409402 A0A1W2PPM0 123 aa19.1■□□□□ 0.65
SPIRE1-202ENST00000409402 C22orf34Q6ZV56 151 aa19.09■□□□□ 0.65
SPIRE1-202ENST00000409402 MDFICQ9P1T7 246 aa19.09■□□□□ 0.65
SPIRE1-202ENST00000409402 RPL39P62891 51 aaKnown RBP19.08■□□□□ 0.64
SPIRE1-202ENST00000409402 GTSF1Q8WW33 167 aa19.08■□□□□ 0.64
SPIRE1-202ENST00000409402 FUSP35637 526 aaKnown RBP eCLIP19.08■□□□□ 0.64
SPIRE1-202ENST00000409402 CTRLP40313 264 aa19.08■□□□□ 0.64
SPIRE1-202ENST00000409402 SPAG11BQ08648 103 aa19.07■□□□□ 0.64
SPIRE1-202ENST00000409402 ACACBO00763 2458 aa19.07■□□□□ 0.64
SPIRE1-202ENST00000409402 PROP1O75360 226 aa19.06■□□□□ 0.64
SPIRE1-202ENST00000409402 BAALC-AS2P0C853 105 aa19.06■□□□□ 0.64
SPIRE1-202ENST00000409402 MAJINQ3KP22 176 aa19.06■□□□□ 0.64
SPIRE1-202ENST00000409402 ETDBQ3ZM63 59 aa19.06■□□□□ 0.64
SPIRE1-202ENST00000409402 PCP2Q8IVA1 136 aa19.06■□□□□ 0.64
SPIRE1-202ENST00000409402 TIMM17AQ99595 171 aa19.06■□□□□ 0.64
SPIRE1-202ENST00000409402 TRBV10-1A0A0K0K1A3 114 aa19.05■□□□□ 0.64
SPIRE1-202ENST00000409402 C11orf71Q6IPW1 123 aa19.05■□□□□ 0.64
SPIRE1-202ENST00000409402 OBSL1O75147 1896 aa19.05■□□□□ 0.64
SPIRE1-202ENST00000409402 Q6ZVH6 145 aa19.05■□□□□ 0.64
SPIRE1-202ENST00000409402 HILS1P60008 231 aa19.05■□□□□ 0.64
SPIRE1-202ENST00000409402 ZNF124Q15973 351 aa19.05■□□□□ 0.64
SPIRE1-202ENST00000409402 TOMM6Q96B49 74 aa19.05■□□□□ 0.64
SPIRE1-202ENST00000409402 LY6G6DO95868 133 aa19.04■□□□□ 0.64
SPIRE1-202ENST00000409402 CUL9Q8IWT3 2517 aa19.04■□□□□ 0.64
SPIRE1-202ENST00000409402 H0YGX0 51 aa19.04■□□□□ 0.64
SPIRE1-202ENST00000409402 SMIM9A6NGZ8 99 aa19.03■□□□□ 0.64
SPIRE1-202ENST00000409402 DEFB114Q30KQ6 69 aa19.03■□□□□ 0.64
SPIRE1-202ENST00000409402 Q6ZSV7 163 aa19.03■□□□□ 0.64
SPIRE1-202ENST00000409402 C14orf177Q52M58 125 aa19.02■□□□□ 0.64
SPIRE1-202ENST00000409402 DYSFO75923 2080 aa19.02■□□□□ 0.64
SPIRE1-202ENST00000409402 OPRPNQ99935 248 aaPredicted RBP19.02■□□□□ 0.64
SPIRE1-202ENST00000409402 H3BMG7 143 aa19.02■□□□□ 0.64
SPIRE1-202ENST00000409402 DENND4AQ7Z401 1863 aa19.02■□□□□ 0.63
SPIRE1-202ENST00000409402 IGKV1D-37A0A075B6S9 117 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms