RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 VWCEQ96DN2 955 aa9.56□□□□□ -0.88
SHANK2-203ENST00000409161 TRBV7-3A0A075B6L6 115 aa9.56□□□□□ -0.88
SHANK2-203ENST00000409161 MRPL23Q16540 153 aaKnown RBP9.55□□□□□ -0.88
SHANK2-203ENST00000409161 TIMM17AQ99595 171 aa9.55□□□□□ -0.88
SHANK2-203ENST00000409161 NOP10Q9NPE3 64 aaKnown RBP9.55□□□□□ -0.88
SHANK2-203ENST00000409161 E9PLD3 99 aa9.55□□□□□ -0.88
SHANK2-203ENST00000409161 C4orf48Q5BLP8 95 aa9.55□□□□□ -0.88
SHANK2-203ENST00000409161 RS1O15537 224 aa9.55□□□□□ -0.88
SHANK2-203ENST00000409161 MED14OSP0DP75 135 aa9.55□□□□□ -0.88
SHANK2-203ENST00000409161 NDUFV3P56181 108 aaKnown RBP9.55□□□□□ -0.88
SHANK2-203ENST00000409161 Q8N1Y9 231 aa9.55□□□□□ -0.88
SHANK2-203ENST00000409161 CAMK2N2Q96S95 79 aa9.55□□□□□ -0.88
SHANK2-203ENST00000409161 Q0VFX4 171 aa9.55□□□□□ -0.88
SHANK2-203ENST00000409161 ZNF491Q8N8L2 437 aa9.54□□□□□ -0.88
SHANK2-203ENST00000409161 CLPSL2Q6UWE3 100 aa9.54□□□□□ -0.88
SHANK2-203ENST00000409161 NDUFA1O15239 70 aa9.54□□□□□ -0.88
SHANK2-203ENST00000409161 Q6ZUT4 128 aa9.54□□□□□ -0.88
SHANK2-203ENST00000409161 LRP4O75096 1905 aa9.54□□□□□ -0.88
SHANK2-203ENST00000409161 C9orf47Q6ZRZ4 202 aa9.54□□□□□ -0.88
SHANK2-203ENST00000409161 FAM240AA0A1B0GVK7 77 aa9.54□□□□□ -0.88
SHANK2-203ENST00000409161 RNASE13Q5GAN3 156 aaKnown RBP9.54□□□□□ -0.88
SHANK2-203ENST00000409161 ZNF581Q9P0T4 197 aa9.54□□□□□ -0.88
SHANK2-203ENST00000409161 U3KQE9 123 aa9.54□□□□□ -0.88
SHANK2-203ENST00000409161 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.54□□□□□ -0.88
SHANK2-203ENST00000409161 IGKV2-29A2NJV5 120 aaPredicted RBP9.54□□□□□ -0.88
SHANK2-203ENST00000409161 WIPF3A6NGB9 483 aa9.53□□□□□ -0.88
SHANK2-203ENST00000409161 G3V318 75 aa9.53□□□□□ -0.88
SHANK2-203ENST00000409161 DIRC1Q969H9 104 aa9.53□□□□□ -0.88
SHANK2-203ENST00000409161 NDUFC2-KCTD14E9PQ53 114 aa9.53□□□□□ -0.88
SHANK2-203ENST00000409161 CTRLP40313 264 aa9.53□□□□□ -0.88
SHANK2-203ENST00000409161 LY6DQ14210 128 aa9.53□□□□□ -0.88
SHANK2-203ENST00000409161 C1orf147Q96MC9 270 aaPredicted RBP9.53□□□□□ -0.88
SHANK2-203ENST00000409161 UPK3BQ9BT76 320 aa9.52□□□□□ -0.89
SHANK2-203ENST00000409161 VPREB3Q9UKI3 123 aa9.52□□□□□ -0.89
SHANK2-203ENST00000409161 TM2D2Q9BX73 214 aa9.52□□□□□ -0.89
SHANK2-203ENST00000409161 FHL1Q13642 323 aa9.51□□□□□ -0.89
SHANK2-203ENST00000409161 RUSC1-AS1Q66K80 236 aa9.51□□□□□ -0.89
SHANK2-203ENST00000409161 THSD7BQ9C0I4 1608 aa9.51□□□□□ -0.89
SHANK2-203ENST00000409161 RNF144BQ7Z419 303 aa9.51□□□□□ -0.89
SHANK2-203ENST00000409161 IGFL3Q6UXB1 125 aa9.51□□□□□ -0.89
SHANK2-203ENST00000409161 FGF23Q9GZV9 251 aaPredicted RBP9.51□□□□□ -0.89
SHANK2-203ENST00000409161 GPR179Q6PRD1 2367 aa9.51□□□□□ -0.89
SHANK2-203ENST00000409161 LOXP28300 417 aaPredicted RBP9.51□□□□□ -0.89
SHANK2-203ENST00000409161 WFDC2Q14508 124 aa9.5□□□□□ -0.89
SHANK2-203ENST00000409161 IGHV4-28A0A0C4DH34 117 aa9.5□□□□□ -0.89
SHANK2-203ENST00000409161 IGLV1-44P01699 117 aa9.5□□□□□ -0.89
SHANK2-203ENST00000409161 GYPEP15421 78 aa9.5□□□□□ -0.89
SHANK2-203ENST00000409161 Q8NFD4 153 aa9.5□□□□□ -0.89
SHANK2-203ENST00000409161 FXYD2P54710 66 aa9.5□□□□□ -0.89
SHANK2-203ENST00000409161 IGKV1OR2-108A0A075B7D4 117 aa9.5□□□□□ -0.89
SHANK2-203ENST00000409161 KIR2DL5BQ8NHK3 375 aa9.5□□□□□ -0.89
SHANK2-203ENST00000409161 FAM236DA0A1B0GTK5 79 aa9.5□□□□□ -0.89
SHANK2-203ENST00000409161 FAM236CP0DP71 79 aa9.5□□□□□ -0.89
SHANK2-203ENST00000409161 RPL39LQ96EH5 51 aaKnown RBP9.49□□□□□ -0.89
SHANK2-203ENST00000409161 UBE2AP49459 152 aa9.49□□□□□ -0.89
SHANK2-203ENST00000409161 NPBQ8NG41 125 aa9.49□□□□□ -0.89
SHANK2-203ENST00000409161 TRBV6-1A0A0K0K1D8 114 aa9.49□□□□□ -0.89
SHANK2-203ENST00000409161 HOXB4P17483 251 aaPredicted RBP9.49□□□□□ -0.89
SHANK2-203ENST00000409161 C10orf105Q8TEF2 133 aa9.49□□□□□ -0.89
SHANK2-203ENST00000409161 AGPAT4-IT1Q9H0P7 198 aa9.49□□□□□ -0.89
SHANK2-203ENST00000409161 GNRH2O43555 120 aa9.49□□□□□ -0.89
SHANK2-203ENST00000409161 GP9P14770 177 aa9.49□□□□□ -0.89
SHANK2-203ENST00000409161 IGLV3-9A0A075B6K5 115 aa9.49□□□□□ -0.89
SHANK2-203ENST00000409161 TMEM105Q8N8V8 129 aa9.49□□□□□ -0.89
SHANK2-203ENST00000409161 CCL18P55774 89 aa9.49□□□□□ -0.89
SHANK2-203ENST00000409161 SPTSSBQ8NFR3 76 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 LRRK2Q5S007 2527 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 IGLV3-1P01715 115 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 SPART-AS1P0CW21 52 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 TRAV26-1A0A087WT03 109 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 C5orf24Q7Z6I8 188 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 NDUFA11Q86Y39 141 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 LECT2O14960 151 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 GNLYP22749 145 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 ODF1Q14990 250 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 MIAQ16674 131 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 C9orf66Q5T8R8 295 aa9.48□□□□□ -0.89
SHANK2-203ENST00000409161 CCL24O00175 119 aa9.47□□□□□ -0.89
SHANK2-203ENST00000409161 C5orf38Q86SI9 138 aa9.47□□□□□ -0.89
SHANK2-203ENST00000409161 RNASE8Q8TDE3 154 aaKnown RBP9.47□□□□□ -0.89
SHANK2-203ENST00000409161 IGHV4-4A0A075B6R2 117 aa9.47□□□□□ -0.89
SHANK2-203ENST00000409161 RNF223E7ERA6 249 aa9.47□□□□□ -0.89
SHANK2-203ENST00000409161 SEM1Q6ZVN7 128 aa9.47□□□□□ -0.89
SHANK2-203ENST00000409161 WDR87Q6ZQQ6 2873 aa9.47□□□□□ -0.89
SHANK2-203ENST00000409161 USP17L23D6RBM5 183 aa9.47□□□□□ -0.89
SHANK2-203ENST00000409161 IGKV4-1P06312 121 aa9.47□□□□□ -0.89
SHANK2-203ENST00000409161 C3orf22Q8N5N4 141 aa9.47□□□□□ -0.89
SHANK2-203ENST00000409161 ZNRD1Q9P1U0 126 aa9.47□□□□□ -0.89
SHANK2-203ENST00000409161 COL5A1P20908 1838 aaPredicted RBP9.47□□□□□ -0.89
SHANK2-203ENST00000409161 WDR86Q86TI4 376 aa9.47□□□□□ -0.89
SHANK2-203ENST00000409161 LYRM9A8MSI8 78 aa9.46□□□□□ -0.89
SHANK2-203ENST00000409161 C14orf177Q52M58 125 aa9.46□□□□□ -0.89
SHANK2-203ENST00000409161 BPY2O14599 106 aa9.46□□□□□ -0.89
SHANK2-203ENST00000409161 ANKRD39Q53RE8 183 aa9.46□□□□□ -0.89
SHANK2-203ENST00000409161 TPSG1Q9NRR2 321 aa9.46□□□□□ -0.89
SHANK2-203ENST00000409161 SPATA12Q7Z6I5 190 aa9.46□□□□□ -0.89
SHANK2-203ENST00000409161 C16orf54Q6UWD8 224 aa9.46□□□□□ -0.9
SHANK2-203ENST00000409161 Q6ZQT7 251 aa9.46□□□□□ -0.9
SHANK2-203ENST00000409161 H0Y9J4 135 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms