RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 IGLV11-55A0A075B6I3 123 aa12.32□□□□□ -0.44
LSP1-204ENST00000406638 TRBV7-9A0A0J9YWB2 115 aa12.32□□□□□ -0.44
LSP1-204ENST00000406638 RHODO00212 210 aa12.32□□□□□ -0.44
LSP1-204ENST00000406638 NDUFV3P56181 108 aaKnown RBP12.32□□□□□ -0.44
LSP1-204ENST00000406638 C2orf66Q6UXQ4 117 aa12.32□□□□□ -0.44
LSP1-204ENST00000406638 BRD3OSQ6XYD6 125 aa12.32□□□□□ -0.44
LSP1-204ENST00000406638 SMIM20Q8N5G0 67 aa12.32□□□□□ -0.44
LSP1-204ENST00000406638 PIMREGQ9BSJ6 248 aa12.32□□□□□ -0.44
LSP1-204ENST00000406638 APCP25054 2843 aa12.32□□□□□ -0.44
LSP1-204ENST00000406638 C9JAW5 83 aa12.32□□□□□ -0.44
LSP1-204ENST00000406638 CTSGP08311 255 aa12.32□□□□□ -0.44
LSP1-204ENST00000406638 ORMDL2Q53FV1 153 aa12.32□□□□□ -0.44
LSP1-204ENST00000406638 TRPT1Q86TN4 253 aaKnown RBP12.32□□□□□ -0.44
LSP1-204ENST00000406638 NBR2O15453 112 aa12.31□□□□□ -0.44
LSP1-204ENST00000406638 SRD5A1P18405 259 aa12.31□□□□□ -0.44
LSP1-204ENST00000406638 SAA4P35542 130 aa12.31□□□□□ -0.44
LSP1-204ENST00000406638 A0A0J9YY99 117 aa12.31□□□□□ -0.44
LSP1-204ENST00000406638 SLC25A20O43772 301 aa12.31□□□□□ -0.44
LSP1-204ENST00000406638 SNCGO76070 127 aa12.31□□□□□ -0.44
LSP1-204ENST00000406638 SUMO2P61956 95 aaKnown RBP12.31□□□□□ -0.44
LSP1-204ENST00000406638 GAGE12JA6NER3 117 aa12.3□□□□□ -0.44
LSP1-204ENST00000406638 H7C2G1 150 aa12.3□□□□□ -0.44
LSP1-204ENST00000406638 J3KRW8 73 aa12.3□□□□□ -0.44
LSP1-204ENST00000406638 GAGE7O76087 117 aa12.3□□□□□ -0.44
LSP1-204ENST00000406638 GAGE12FP0CL80 117 aa12.3□□□□□ -0.44
LSP1-204ENST00000406638 GAGE12GP0CL81 117 aa12.3□□□□□ -0.44
LSP1-204ENST00000406638 GAGE12IP0CL82 117 aa12.3□□□□□ -0.44
LSP1-204ENST00000406638 GAGE4Q13068 117 aa12.3□□□□□ -0.44
LSP1-204ENST00000406638 M0R381 172 aa12.3□□□□□ -0.44
LSP1-204ENST00000406638 C10orf126Q8N4M7 172 aa12.3□□□□□ -0.44
LSP1-204ENST00000406638 CENPVL3A0A0U1RRI6 287 aa12.29□□□□□ -0.44
LSP1-204ENST00000406638 TTC32Q5I0X7 151 aa12.29□□□□□ -0.44
LSP1-204ENST00000406638 IGHV3-49A0A0A0MS15 119 aa12.29□□□□□ -0.44
LSP1-204ENST00000406638 NDPQ00604 133 aa12.29□□□□□ -0.44
LSP1-204ENST00000406638 C1orf122Q6ZSJ8 110 aa12.29□□□□□ -0.44
LSP1-204ENST00000406638 C11orf86A6NJI1 115 aa12.28□□□□□ -0.44
LSP1-204ENST00000406638 PRO1854Q9UHT4 67 aa12.28□□□□□ -0.44
LSP1-204ENST00000406638 CCDC168Q8NDH2 2452 aa12.28□□□□□ -0.44
LSP1-204ENST00000406638 AVPP01185 164 aa12.28□□□□□ -0.44
LSP1-204ENST00000406638 IGHV3-30P01768 117 aa12.28□□□□□ -0.44
LSP1-204ENST00000406638 IGHV3-30-5P0DP03 117 aa12.28□□□□□ -0.44
LSP1-204ENST00000406638 IGHV4-38-2P0DP08 117 aa12.28□□□□□ -0.44
LSP1-204ENST00000406638 RPL32P62910 135 aaKnown RBP12.28□□□□□ -0.44
LSP1-204ENST00000406638 RNF5Q99942 180 aa12.28□□□□□ -0.44
LSP1-204ENST00000406638 DUSP14O95147 198 aaKnown RBP12.27□□□□□ -0.44
LSP1-204ENST00000406638 C14orf178Q8N769 122 aaPredicted RBP12.27□□□□□ -0.44
LSP1-204ENST00000406638 SLC50A1Q9BRV3 221 aa12.27□□□□□ -0.44
LSP1-204ENST00000406638 HIF1ANQ9NWT6 349 aa12.27□□□□□ -0.44
LSP1-204ENST00000406638 CRYGDP07320 174 aa12.27□□□□□ -0.45
LSP1-204ENST00000406638 TSPEAR-AS2P59090 65 aa12.27□□□□□ -0.45
LSP1-204ENST00000406638 IFITM1P13164 125 aa12.26□□□□□ -0.45
LSP1-204ENST00000406638 UBE2E1P51965 193 aa12.26□□□□□ -0.45
LSP1-204ENST00000406638 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.26□□□□□ -0.45
LSP1-204ENST00000406638 NTN5Q8WTR8 489 aaPredicted RBP12.26□□□□□ -0.45
LSP1-204ENST00000406638 TMEM219Q86XT9 240 aa12.26□□□□□ -0.45
LSP1-204ENST00000406638 NPFFO15130 113 aa12.25□□□□□ -0.45
LSP1-204ENST00000406638 MGPP08493 103 aa12.25□□□□□ -0.45
LSP1-204ENST00000406638 IGF1P05019 195 aa12.25□□□□□ -0.45
LSP1-204ENST00000406638 FAM159AQ6UWV7 190 aa12.25□□□□□ -0.45
LSP1-204ENST00000406638 Q8N1Y9 231 aa12.25□□□□□ -0.45
LSP1-204ENST00000406638 PRRC2AP48634 2157 aaKnown RBP12.25□□□□□ -0.45
LSP1-204ENST00000406638 IGHV4-4A0A075B6R2 117 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 RBAKDNA6NC62 111 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 ARL3P36405 182 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 FAM110AQ9BQ89 295 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 TLN2Q9Y4G6 2542 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 IGLV4-69A0A075B6H9 119 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 BUB3O43684 328 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 ASIPP42127 132 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 TMEM170BQ5T4T1 132 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 PRR9Q5T870 116 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 Q8N6K4 173 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 SLC25A29Q8N8R3 303 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 TEX49A0A1B0GTD5 131 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 ELANEP08246 267 aa12.24□□□□□ -0.45
LSP1-204ENST00000406638 A4D1N5 150 aa12.23□□□□□ -0.45
LSP1-204ENST00000406638 RNF223E7ERA6 249 aa12.23□□□□□ -0.45
LSP1-204ENST00000406638 TSHBP01222 138 aa12.23□□□□□ -0.45
LSP1-204ENST00000406638 MINOS1Q5TGZ0 78 aa12.23□□□□□ -0.45
LSP1-204ENST00000406638 NPBQ8NG41 125 aa12.23□□□□□ -0.45
LSP1-204ENST00000406638 MINOS1-NBL1R4GNA1 71 aa12.23□□□□□ -0.45
LSP1-204ENST00000406638 EIF4EBP3O60516 100 aaPredicted RBP12.23□□□□□ -0.45
LSP1-204ENST00000406638 HERVK_113P61574 105 aa12.23□□□□□ -0.45
LSP1-204ENST00000406638 PLA2G2AP14555 144 aa12.22□□□□□ -0.45
LSP1-204ENST00000406638 MSMBP08118 114 aa12.22□□□□□ -0.45
LSP1-204ENST00000406638 Q8N9W7 124 aa12.22□□□□□ -0.45
LSP1-204ENST00000406638 BEX4Q9NWD9 120 aaPredicted RBP12.22□□□□□ -0.45
LSP1-204ENST00000406638 A0A096LNT2 108 aa12.21□□□□□ -0.45
LSP1-204ENST00000406638 CLEC3BP05452 202 aa12.21□□□□□ -0.45
LSP1-204ENST00000406638 S100A4P26447 101 aaKnown RBP12.21□□□□□ -0.45
LSP1-204ENST00000406638 C15orf53Q8NAA6 179 aa12.21□□□□□ -0.45
LSP1-204ENST00000406638 RPL39P62891 51 aaKnown RBP12.21□□□□□ -0.46
LSP1-204ENST00000406638 ODF3Q96PU9 254 aa12.21□□□□□ -0.46
LSP1-204ENST00000406638 TP53TG1Q9Y2A0 90 aa12.21□□□□□ -0.46
LSP1-204ENST00000406638 TEX15Q9BXT5 2789 aa12.2□□□□□ -0.46
LSP1-204ENST00000406638 IGHV1-69DA0A0B4J2H0 117 aa12.2□□□□□ -0.46
LSP1-204ENST00000406638 IGHV1-69P01742 117 aa12.2□□□□□ -0.46
LSP1-204ENST00000406638 IGHV3-33P01772 117 aa12.2□□□□□ -0.46
LSP1-204ENST00000406638 DPH3P1Q9H4G8 78 aa12.2□□□□□ -0.46
LSP1-204ENST00000406638 LINC00527Q9UJ94 153 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms