RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 OR11H1Q8NG94 326 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 OR11H2Q8NH07 326 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 UBE2E2Q96LR5 201 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 CLUHP3Q96NS8 147 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 MDFICQ9P1T7 246 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 PYGO1Q9Y3Y4 419 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 TMEM223A0PJW6 202 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 M0QXV9 152 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 IGHV3-30P01768 117 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 IGHV3-30-5P0DP03 117 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 ATP5J2P56134 94 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 TSPEAR-AS2P59090 65 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 SLC25A29Q8N8R3 303 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 NHP2Q9NX24 153 aaKnown RBP2.84□□□□□ -1.95
RTN4-209ENST00000405240 TP53TG1Q9Y2A0 90 aa2.84□□□□□ -1.95
RTN4-209ENST00000405240 RP1L1Q8IWN7 2480 aaPredicted RBP2.84□□□□□ -1.95
RTN4-209ENST00000405240 ASH1LQ9NR48 2969 aaKnown RBP2.84□□□□□ -1.95
RTN4-209ENST00000405240 IGHV1OR15-1A0A075B7D0 117 aa2.84□□□□□ -1.96
RTN4-209ENST00000405240 IGHV4-59P01825 116 aa2.84□□□□□ -1.96
RTN4-209ENST00000405240 RBMY1A1P0DJD3 496 aaKnown RBP2.84□□□□□ -1.96
RTN4-209ENST00000405240 RBMY1CP0DJD4 496 aa2.84□□□□□ -1.96
RTN4-209ENST00000405240 RBMY1FQ15415 496 aaKnown RBP2.84□□□□□ -1.96
RTN4-209ENST00000405240 Q5PR19 223 aa2.84□□□□□ -1.96
RTN4-209ENST00000405240 C10orf99Q6UWK7 81 aa2.84□□□□□ -1.96
RTN4-209ENST00000405240 Q8N1Y9 231 aa2.84□□□□□ -1.96
RTN4-209ENST00000405240 ATP6V0E2Q8NHE4 81 aa2.84□□□□□ -1.96
RTN4-209ENST00000405240 ZNF479Q96JC4 524 aa2.84□□□□□ -1.96
RTN4-209ENST00000405240 SPATA25Q9BR10 227 aa2.84□□□□□ -1.96
RTN4-209ENST00000405240 CACNA1BQ00975 2339 aa2.84□□□□□ -1.96
RTN4-209ENST00000405240 SDHAF1A6NFY7 115 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 EIF4EBP3O60516 100 aaPredicted RBP2.83□□□□□ -1.96
RTN4-209ENST00000405240 MGPP08493 103 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 TMEM95Q3KNT9 176 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 TRPT1Q86TN4 253 aaKnown RBP2.83□□□□□ -1.96
RTN4-209ENST00000405240 HIST1H4GQ99525 98 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 RIF1Q5UIP0 2472 aaKnown RBP2.83□□□□□ -1.96
RTN4-209ENST00000405240 TRAV12-3A0A0B4J271 114 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 LEPROTO15243 131 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 HOXA3O43365 443 aaPredicted RBP2.83□□□□□ -1.96
RTN4-209ENST00000405240 SCGB1A1P11684 91 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 SMCPP49901 116 aaPredicted RBP2.83□□□□□ -1.96
RTN4-209ENST00000405240 RPL39P62891 51 aaKnown RBP2.83□□□□□ -1.96
RTN4-209ENST00000405240 CFAP126Q5VTH2 177 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 C20orf203Q8NBC4 194 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 VPREB3Q9UKI3 123 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 PRRC2AP48634 2157 aaKnown RBP2.83□□□□□ -1.96
RTN4-209ENST00000405240 J3KRW8 73 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 TSPAN13O95857 204 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 RNF151Q2KHN1 245 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 FAM19A3Q7Z5A8 133 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 NDUFA11Q86Y39 141 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 SYT8Q8NBV8 401 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 IL17DQ8TAD2 202 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 PTPRZ1P23471 2315 aaPredicted RBP2.83□□□□□ -1.96
RTN4-209ENST00000405240 TEX48A0A1B0GUV7 120 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 RBMY1BA6NDE4 496 aaKnown RBP2.83□□□□□ -1.96
RTN4-209ENST00000405240 RBMY1EA6NEQ0 496 aaKnown RBP2.83□□□□□ -1.96
RTN4-209ENST00000405240 ZNF815PA8K554 130 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 I3L3M4 83 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 RBMY1DP0C7P1 496 aaKnown RBP2.83□□□□□ -1.96
RTN4-209ENST00000405240 SRD5A1P18405 259 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 SNRPD3P62318 126 aaKnown RBP2.83□□□□□ -1.96
RTN4-209ENST00000405240 WFDC2Q14508 124 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 BEAN1Q3B7T3 259 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 KIR2DL4Q99706 377 aa2.83□□□□□ -1.96
RTN4-209ENST00000405240 SPTBN2O15020 2390 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 IGLV4-3A0A075B6K6 122 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 TRGV11A0A075B6L2 103 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 A0A087WWL8 130 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 H3BMG7 143 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 CFC1BP0CG36 223 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 CFC1P0CG37 223 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 IGHV4-31P0DP07 118 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 MRPS36P82909 103 aaKnown RBP2.82□□□□□ -1.96
RTN4-209ENST00000405240 C11orf72Q8NBR9 251 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 KLHL30-AS1Q8NEE0 82 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 LITAFQ99732 161 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 VPS25Q9BRG1 176 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 WNK2Q9Y3S1 2297 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 M0R2P5 195 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 ZNF22P17026 224 aaPredicted RBP2.82□□□□□ -1.96
RTN4-209ENST00000405240 HOXD3P31249 432 aaPredicted RBP2.82□□□□□ -1.96
RTN4-209ENST00000405240 COTL1Q14019 142 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 LRRC75A-AS1Q8N1F1 130 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 RNF183Q96D59 192 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 CEP295Q9C0D2 2601 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 TMEM238LA0A1B0GVL6 79 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 A6NJY4 79 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 H3BMM0 161 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 RHODO00212 210 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 ZNF688P0C7X2 276 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 HERVK_113P61574 105 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 RPL11P62913 178 aaKnown RBP2.82□□□□□ -1.96
RTN4-209ENST00000405240 KRTAP1-3Q8IUG1 177 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 TMEM263Q8WUH6 116 aaKnown RBP2.82□□□□□ -1.96
RTN4-209ENST00000405240 WFDC12Q8WWY7 111 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 CHCHD7Q9BUK0 85 aa2.82□□□□□ -1.96
RTN4-209ENST00000405240 TRAV12-2A0A075B6T6 113 aa2.81□□□□□ -1.96
RTN4-209ENST00000405240 A0A0B4J2C4 111 aa2.81□□□□□ -1.96
RTN4-209ENST00000405240 J3QQQ9 107 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms