RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 Q9UF83 564 aa8.97□□□□□ -0.97
SDF4-203ENST00000403997 IBA57-AS1B1ANH7 110 aa8.96□□□□□ -0.98
SDF4-203ENST00000403997 PSCAO43653 123 aa8.96□□□□□ -0.98
SDF4-203ENST00000403997 CCL20P78556 96 aa8.96□□□□□ -0.98
SDF4-203ENST00000403997 EIF5AL1Q6IS14 154 aaKnown RBP8.96□□□□□ -0.98
SDF4-203ENST00000403997 ZFP82Q8N141 532 aa8.96□□□□□ -0.98
SDF4-203ENST00000403997 SFRP2Q96HF1 295 aa8.96□□□□□ -0.98
SDF4-203ENST00000403997 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.98
SDF4-203ENST00000403997 RAB5CP51148 216 aa8.95□□□□□ -0.98
SDF4-203ENST00000403997 RPL19P84098 196 aaKnown RBP8.95□□□□□ -0.98
SDF4-203ENST00000403997 MAPKAPK5-AS1Q8N8E1 139 aa8.95□□□□□ -0.98
SDF4-203ENST00000403997 MLST8Q9BVC4 326 aa8.95□□□□□ -0.98
SDF4-203ENST00000403997 Q9HAA7 133 aa8.95□□□□□ -0.98
SDF4-203ENST00000403997 MANBALQ9NQG1 85 aa8.95□□□□□ -0.98
SDF4-203ENST00000403997 LRP1BQ9NZR2 4599 aa8.95□□□□□ -0.98
SDF4-203ENST00000403997 HSPG2P98160 4391 aa8.94□□□□□ -0.98
SDF4-203ENST00000403997 TRAV1-1A0A0B4J248 108 aa8.94□□□□□ -0.98
SDF4-203ENST00000403997 TEX46H3BTG2 121 aa8.94□□□□□ -0.98
SDF4-203ENST00000403997 LINC00694P0DN24 101 aa8.94□□□□□ -0.98
SDF4-203ENST00000403997 PRR27Q6MZM9 219 aa8.94□□□□□ -0.98
SDF4-203ENST00000403997 CDPF1Q6NVV7 123 aa8.94□□□□□ -0.98
SDF4-203ENST00000403997 TCTE3Q8IZS6 198 aa8.94□□□□□ -0.98
SDF4-203ENST00000403997 A0A087WWC5 75 aa8.93□□□□□ -0.98
SDF4-203ENST00000403997 RPL35P42766 123 aaKnown RBP8.93□□□□□ -0.98
SDF4-203ENST00000403997 CXCL1P09341 107 aa8.92□□□□□ -0.98
SDF4-203ENST00000403997 SULT1A2P50226 295 aa8.92□□□□□ -0.98
SDF4-203ENST00000403997 Q8N3U1 123 aa8.92□□□□□ -0.98
SDF4-203ENST00000403997 OR10AG1Q8NH19 301 aa8.92□□□□□ -0.98
SDF4-203ENST00000403997 DERL1Q9BUN8 251 aa8.92□□□□□ -0.98
SDF4-203ENST00000403997 MUC21A0A0G2JKD1 596 aa8.91□□□□□ -0.98
SDF4-203ENST00000403997 MUC21A0A140T8X8 626 aa8.91□□□□□ -0.98
SDF4-203ENST00000403997 LRCOL1A6NCL2 159 aa8.91□□□□□ -0.98
SDF4-203ENST00000403997 SSTP61278 116 aa8.91□□□□□ -0.98
SDF4-203ENST00000403997 RPL36AP83881 106 aaKnown RBP8.91□□□□□ -0.98
SDF4-203ENST00000403997 SPANXN1Q5VSR9 72 aa8.91□□□□□ -0.98
SDF4-203ENST00000403997 SLC51BQ86UW2 128 aa8.91□□□□□ -0.98
SDF4-203ENST00000403997 RPL36ALQ969Q0 106 aaKnown RBP8.91□□□□□ -0.98
SDF4-203ENST00000403997 C11orf52Q96A22 123 aa8.91□□□□□ -0.98
SDF4-203ENST00000403997 TRBV10-1A0A0K0K1A3 114 aa8.9□□□□□ -0.98
SDF4-203ENST00000403997 C1QBP02746 253 aa8.9□□□□□ -0.98
SDF4-203ENST00000403997 LAGE3Q14657 143 aa8.9□□□□□ -0.98
SDF4-203ENST00000403997 CENPWQ5EE01 88 aa8.9□□□□□ -0.98
SDF4-203ENST00000403997 Q6ZNX1 250 aa8.9□□□□□ -0.98
SDF4-203ENST00000403997 DAZ4Q86SG3 579 aaKnown RBP8.9□□□□□ -0.98
SDF4-203ENST00000403997 Q8N1X5 172 aa8.9□□□□□ -0.98
SDF4-203ENST00000403997 DAZAP1Q96EP5 407 aaKnown RBP8.9□□□□□ -0.98
SDF4-203ENST00000403997 TM2D2Q9BX73 214 aa8.9□□□□□ -0.98
SDF4-203ENST00000403997 DAZ3Q9NR90 486 aaKnown RBP8.9□□□□□ -0.98
SDF4-203ENST00000403997 URGCP-MRPS24S4R325 110 aa8.9□□□□□ -0.98
SDF4-203ENST00000403997 TRBV7-3A0A075B6L6 115 aa8.89□□□□□ -0.99
SDF4-203ENST00000403997 TRAV8-3A0A0A6YYJ7 113 aa8.89□□□□□ -0.99
SDF4-203ENST00000403997 RAB19A4D1S5 217 aa8.89□□□□□ -0.99
SDF4-203ENST00000403997 SNAI2O43623 268 aa8.89□□□□□ -0.99
SDF4-203ENST00000403997 IFNA1P01562 189 aa8.89□□□□□ -0.99
SDF4-203ENST00000403997 OR5AL1P0C617 328 aa8.89□□□□□ -0.99
SDF4-203ENST00000403997 KRTAP10-1P60331 282 aa8.89□□□□□ -0.99
SDF4-203ENST00000403997 RAB4BP61018 213 aa8.89□□□□□ -0.99
SDF4-203ENST00000403997 ZNF56Q15929 161 aa8.89□□□□□ -0.99
SDF4-203ENST00000403997 SSBP4Q9BWG4 385 aaPredicted RBP8.89□□□□□ -0.99
SDF4-203ENST00000403997 F5H697 171 aa8.88□□□□□ -0.99
SDF4-203ENST00000403997 PDE6DO43924 150 aa8.88□□□□□ -0.99
SDF4-203ENST00000403997 GCSHP23434 173 aa8.88□□□□□ -0.99
SDF4-203ENST00000403997 UBE2D3P61077 147 aa8.88□□□□□ -0.99
SDF4-203ENST00000403997 UBE2D2P62837 147 aa8.88□□□□□ -0.99
SDF4-203ENST00000403997 TOR2AQ5JU69 321 aa8.88□□□□□ -0.99
SDF4-203ENST00000403997 MED9Q9NWA0 146 aa8.88□□□□□ -0.99
SDF4-203ENST00000403997 IGLV5-52A0A0A0MRZ9 124 aa8.87□□□□□ -0.99
SDF4-203ENST00000403997 IGLV2-8P01709 118 aa8.87□□□□□ -0.99
SDF4-203ENST00000403997 SMIM17P0DL12 118 aa8.87□□□□□ -0.99
SDF4-203ENST00000403997 GZMBP10144 247 aa8.87□□□□□ -0.99
SDF4-203ENST00000403997 GNG4P50150 75 aa8.87□□□□□ -0.99
SDF4-203ENST00000403997 MEF2BQ02080 365 aaPredicted RBP8.87□□□□□ -0.99
SDF4-203ENST00000403997 NIT1Q86X76 327 aa8.87□□□□□ -0.99
SDF4-203ENST00000403997 OR2D3Q8NGH3 330 aa8.87□□□□□ -0.99
SDF4-203ENST00000403997 TPPP3Q9BW30 176 aa8.87□□□□□ -0.99
SDF4-203ENST00000403997 VAX2Q9UIW0 290 aa8.87□□□□□ -0.99
SDF4-203ENST00000403997 hCG_2014768A0A024R1R8 64 aa8.86□□□□□ -0.99
SDF4-203ENST00000403997 BCL2P10415 239 aa8.86□□□□□ -0.99
SDF4-203ENST00000403997 XGP55808 180 aa8.86□□□□□ -0.99
SDF4-203ENST00000403997 RPS20P60866 119 aaKnown RBP8.86□□□□□ -0.99
SDF4-203ENST00000403997 KCNIP4Q6PIL6 250 aa8.86□□□□□ -0.99
SDF4-203ENST00000403997 AKAP14Q86UN6 197 aa8.86□□□□□ -0.99
SDF4-203ENST00000403997 Q8N814 137 aa8.86□□□□□ -0.99
SDF4-203ENST00000403997 NEXN-AS1Q8NBZ9 246 aa8.86□□□□□ -0.99
SDF4-203ENST00000403997 OR10G8Q8NGN5 311 aa8.86□□□□□ -0.99
SDF4-203ENST00000403997 NTN5Q8WTR8 489 aaPredicted RBP8.86□□□□□ -0.99
SDF4-203ENST00000403997 KLK12Q9UKR0 248 aa8.86□□□□□ -0.99
SDF4-203ENST00000403997 DNAH5Q8TE73 4624 aa8.86□□□□□ -0.99
SDF4-203ENST00000403997 APOBP04114 4563 aaKnown RBP8.86□□□□□ -0.99
SDF4-203ENST00000403997 A0A087WX48 190 aa8.85□□□□□ -0.99
SDF4-203ENST00000403997 RBFOX3A6NFN3 312 aa8.85□□□□□ -0.99
SDF4-203ENST00000403997 TMEM262E9PQX1 116 aa8.85□□□□□ -0.99
SDF4-203ENST00000403997 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.85□□□□□ -0.99
SDF4-203ENST00000403997 FER1L6-AS1Q8NA97 138 aa8.85□□□□□ -0.99
SDF4-203ENST00000403997 SMIM12Q96EX1 92 aa8.85□□□□□ -0.99
SDF4-203ENST00000403997 AP1S3Q96PC3 154 aa8.85□□□□□ -0.99
SDF4-203ENST00000403997 ABCA13Q86UQ4 5058 aa8.85□□□□□ -0.99
SDF4-203ENST00000403997 XKRY2A2RUG3 117 aa8.84□□□□□ -0.99
SDF4-203ENST00000403997 C19orf71A6NCJ1 209 aa8.84□□□□□ -0.99
SDF4-203ENST00000403997 P01737 135 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms