RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 LYZL1Q6UWQ5 148 aa9.53□□□□□ -0.88
VPREB1-202ENST00000403807 SLC25A29Q8N8R3 303 aa9.53□□□□□ -0.88
VPREB1-202ENST00000403807 SAMD10Q9BYL1 202 aa9.53□□□□□ -0.88
VPREB1-202ENST00000403807 A0A087WWL8 130 aa9.52□□□□□ -0.89
VPREB1-202ENST00000403807 K7EQD1 137 aa9.52□□□□□ -0.89
VPREB1-202ENST00000403807 CRYGDP07320 174 aa9.52□□□□□ -0.89
VPREB1-202ENST00000403807 RHOHQ15669 191 aa9.52□□□□□ -0.89
VPREB1-202ENST00000403807 UFSP1Q6NVU6 142 aa9.52□□□□□ -0.89
VPREB1-202ENST00000403807 WDR73Q6P4I2 378 aa9.52□□□□□ -0.89
VPREB1-202ENST00000403807 ISOC2Q96AB3 205 aa9.52□□□□□ -0.89
VPREB1-202ENST00000403807 RYR2Q92736 4967 aa9.51□□□□□ -0.89
VPREB1-202ENST00000403807 SMIM17P0DL12 118 aa9.51□□□□□ -0.89
VPREB1-202ENST00000403807 SRIP30626 198 aa9.51□□□□□ -0.89
VPREB1-202ENST00000403807 FAM3BP58499 235 aaPredicted RBP9.51□□□□□ -0.89
VPREB1-202ENST00000403807 UQCC3Q6UW78 93 aa9.51□□□□□ -0.89
VPREB1-202ENST00000403807 NEGR1Q7Z3B1 354 aa9.51□□□□□ -0.89
VPREB1-202ENST00000403807 NTF3P20783 257 aa9.5□□□□□ -0.89
VPREB1-202ENST00000403807 FOXA3P55318 350 aaPredicted RBP9.5□□□□□ -0.89
VPREB1-202ENST00000403807 ESRGQ1W209 222 aa9.5□□□□□ -0.89
VPREB1-202ENST00000403807 Q6ZSN1 163 aa9.5□□□□□ -0.89
VPREB1-202ENST00000403807 SH2D6Q7Z4S9 175 aa9.5□□□□□ -0.89
VPREB1-202ENST00000403807 C14orf178Q8N769 122 aaPredicted RBP9.5□□□□□ -0.89
VPREB1-202ENST00000403807 OR10G8Q8NGN5 311 aa9.5□□□□□ -0.89
VPREB1-202ENST00000403807 TSKUQ8WUA8 353 aa9.5□□□□□ -0.89
VPREB1-202ENST00000403807 GTSF1Q8WW33 167 aa9.5□□□□□ -0.89
VPREB1-202ENST00000403807 AP1S3Q96PC3 154 aa9.5□□□□□ -0.89
VPREB1-202ENST00000403807 SACSQ9NZJ4 4579 aa9.5□□□□□ -0.89
VPREB1-202ENST00000403807 DNAH1Q9P2D7 4330 aa9.49□□□□□ -0.89
VPREB1-202ENST00000403807 LOC100131303A0A0U1RQF7 123 aa9.49□□□□□ -0.89
VPREB1-202ENST00000403807 FAM231BA6NCW3 169 aa9.49□□□□□ -0.89
VPREB1-202ENST00000403807 TRGC1P0CF51 173 aa9.49□□□□□ -0.89
VPREB1-202ENST00000403807 CTRLP40313 264 aa9.49□□□□□ -0.89
VPREB1-202ENST00000403807 RAB4BP61018 213 aa9.49□□□□□ -0.89
VPREB1-202ENST00000403807 GFRA4Q9GZZ7 299 aa9.49□□□□□ -0.89
VPREB1-202ENST00000403807 MSRB1Q9NZV6 116 aa9.49□□□□□ -0.89
VPREB1-202ENST00000403807 LINC00588Q9Y4M8 146 aa9.49□□□□□ -0.89
VPREB1-202ENST00000403807 NACAE9PAV3 2078 aa9.48□□□□□ -0.89
VPREB1-202ENST00000403807 TWIST1Q15672 202 aa9.48□□□□□ -0.89
VPREB1-202ENST00000403807 LYPD5Q6UWN5 251 aa9.48□□□□□ -0.89
VPREB1-202ENST00000403807 BORCS7Q96B45 105 aa9.48□□□□□ -0.89
VPREB1-202ENST00000403807 PGLYRP4Q96LB8 373 aa9.48□□□□□ -0.89
VPREB1-202ENST00000403807 CNFNQ9BYD5 112 aa9.48□□□□□ -0.89
VPREB1-202ENST00000403807 V9GYV3 84 aa9.48□□□□□ -0.89
VPREB1-202ENST00000403807 LINC00862A6NCI5 91 aa9.47□□□□□ -0.89
VPREB1-202ENST00000403807 F5H697 171 aa9.47□□□□□ -0.89
VPREB1-202ENST00000403807 PNRC1Q12796 327 aaPredicted RBP9.47□□□□□ -0.89
VPREB1-202ENST00000403807 ZNF56Q15929 161 aa9.47□□□□□ -0.89
VPREB1-202ENST00000403807 COMMD7Q86VX2 200 aa9.47□□□□□ -0.89
VPREB1-202ENST00000403807 TRBV10-1A0A0K0K1A3 114 aa9.46□□□□□ -0.9
VPREB1-202ENST00000403807 TMEM218A2RU14 115 aa9.46□□□□□ -0.9
VPREB1-202ENST00000403807 HIGD1CA8MV81 97 aa9.46□□□□□ -0.9
VPREB1-202ENST00000403807 SMIM15Q7Z3B0 74 aa9.46□□□□□ -0.9
VPREB1-202ENST00000403807 MRPS16Q9Y3D3 137 aaKnown RBP9.46□□□□□ -0.9
VPREB1-202ENST00000403807 KIF25-AS1Q9Y6Z4 181 aa9.46□□□□□ -0.9
VPREB1-202ENST00000403807 VPS13DQ5THJ4 4388 aa9.46□□□□□ -0.9
VPREB1-202ENST00000403807 GAGE12JA6NER3 117 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 F8W036 122 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 EVI2AP22794 236 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 GAGE1Q13065 139 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 GAGE4Q13068 117 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 GAGE5Q13069 117 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 GAGE13Q4V321 117 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 ATP6V0E2Q8NHE4 81 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 UPK3BQ9BT76 320 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 DPH3P1Q9H4G8 78 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 Q9H8V8 135 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 NAT8BQ9UHF3 227 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 KMT2AQ03164 3969 aa9.45□□□□□ -0.9
VPREB1-202ENST00000403807 A0A1B0GUT8 65 aa9.44□□□□□ -0.9
VPREB1-202ENST00000403807 PPP1R2P9O14990 202 aa9.44□□□□□ -0.9
VPREB1-202ENST00000403807 MGPP08493 103 aa9.44□□□□□ -0.9
VPREB1-202ENST00000403807 LINC00315P59091 139 aa9.44□□□□□ -0.9
VPREB1-202ENST00000403807 RPL36AP83881 106 aaKnown RBP9.44□□□□□ -0.9
VPREB1-202ENST00000403807 ZNRF2Q8NHG8 242 aa9.44□□□□□ -0.9
VPREB1-202ENST00000403807 RPL36ALQ969Q0 106 aaKnown RBP9.44□□□□□ -0.9
VPREB1-202ENST00000403807 SMIM27A0A1W2PRY6 76 aa9.43□□□□□ -0.9
VPREB1-202ENST00000403807 TIRAPP58753 221 aa9.43□□□□□ -0.9
VPREB1-202ENST00000403807 RIGQ13278 110 aa9.43□□□□□ -0.9
VPREB1-202ENST00000403807 NUP35Q8NFH5 326 aa9.43□□□□□ -0.9
VPREB1-202ENST00000403807 ANAPC16Q96DE5 110 aa9.43□□□□□ -0.9
VPREB1-202ENST00000403807 GTSF1LQ9H1H1 148 aa9.43□□□□□ -0.9
VPREB1-202ENST00000403807 HYDINQ4G0P3 5121 aa9.43□□□□□ -0.9
VPREB1-202ENST00000403807 IGLV2-18A0A075B6J9 118 aa9.42□□□□□ -0.9
VPREB1-202ENST00000403807 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
VPREB1-202ENST00000403807 H7C1H1 209 aa9.42□□□□□ -0.9
VPREB1-202ENST00000403807 MT-ND4LP03901 98 aa9.42□□□□□ -0.9
VPREB1-202ENST00000403807 SEC11CQ9BY50 192 aa9.42□□□□□ -0.9
VPREB1-202ENST00000403807 Q9UF83 564 aa9.42□□□□□ -0.9
VPREB1-202ENST00000403807 M0R2N4 97 aa9.41□□□□□ -0.9
VPREB1-202ENST00000403807 LINC00694P0DN24 101 aa9.41□□□□□ -0.9
VPREB1-202ENST00000403807 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.41□□□□□ -0.9
VPREB1-202ENST00000403807 NEXN-AS1Q8NBZ9 246 aa9.41□□□□□ -0.9
VPREB1-202ENST00000403807 TRAV8-6A0A0B4J262 113 aa9.4□□□□□ -0.9
VPREB1-202ENST00000403807 M0QY20 66 aa9.4□□□□□ -0.9
VPREB1-202ENST00000403807 SIVA1O15304 175 aa9.4□□□□□ -0.9
VPREB1-202ENST00000403807 ADCYAP1P18509 176 aa9.4□□□□□ -0.9
VPREB1-202ENST00000403807 SUMO4Q6EEV6 95 aa9.4□□□□□ -0.9
VPREB1-202ENST00000403807 DNAJC30Q96LL9 226 aa9.4□□□□□ -0.9
VPREB1-202ENST00000403807 TNFRSF18Q9Y5U5 241 aa9.4□□□□□ -0.9
VPREB1-202ENST00000403807 DNAH6Q9C0G6 4158 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms