RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 PRR3P79522 188 aaKnown RBP11.33□□□□□ -0.6
UFD1-202ENST00000399523 FAM74A4Q5TZK3 123 aa11.33□□□□□ -0.6
UFD1-202ENST00000399523 TRAV6A0A075B6T7 132 aa11.31□□□□□ -0.6
UFD1-202ENST00000399523 A0A087WWL8 130 aa11.31□□□□□ -0.6
UFD1-202ENST00000399523 K7EQM0 130 aa11.31□□□□□ -0.6
UFD1-202ENST00000399523 SLPIP03973 132 aa11.31□□□□□ -0.6
UFD1-202ENST00000399523 TCRBP04435 133 aa11.31□□□□□ -0.6
UFD1-202ENST00000399523 PKIAP61925 76 aa11.31□□□□□ -0.6
UFD1-202ENST00000399523 FLI1Q01543 452 aaPredicted RBP11.31□□□□□ -0.6
UFD1-202ENST00000399523 C5orf17Q8NAS9 161 aa11.31□□□□□ -0.6
UFD1-202ENST00000399523 OR10G8Q8NGN5 311 aa11.31□□□□□ -0.6
UFD1-202ENST00000399523 SFRP2Q96HF1 295 aa11.31□□□□□ -0.6
UFD1-202ENST00000399523 SAPCD1Q5SSQ6 148 aa11.3□□□□□ -0.6
UFD1-202ENST00000399523 DNLZQ5SXM8 178 aa11.3□□□□□ -0.6
UFD1-202ENST00000399523 REG3GQ6UW15 175 aa11.3□□□□□ -0.6
UFD1-202ENST00000399523 PRNTQ86SH4 94 aa11.3□□□□□ -0.6
UFD1-202ENST00000399523 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
UFD1-202ENST00000399523 hDV102S1A0JD36 115 aa11.29□□□□□ -0.6
UFD1-202ENST00000399523 H3BVH4 76 aa11.29□□□□□ -0.6
UFD1-202ENST00000399523 PLA2G10O15496 165 aa11.29□□□□□ -0.6
UFD1-202ENST00000399523 IL7P13232 177 aa11.29□□□□□ -0.6
UFD1-202ENST00000399523 SPINK6Q6UWN8 80 aa11.29□□□□□ -0.6
UFD1-202ENST00000399523 OR11H4Q8NGC9 324 aa11.29□□□□□ -0.6
UFD1-202ENST00000399523 KRTAP9-6A0A140TA67 174 aa11.28□□□□□ -0.6
UFD1-202ENST00000399523 FABP5P3A8MUU1 101 aa11.28□□□□□ -0.6
UFD1-202ENST00000399523 PTTG1O95997 202 aa11.28□□□□□ -0.6
UFD1-202ENST00000399523 ARMS2P0C7Q2 107 aa11.28□□□□□ -0.6
UFD1-202ENST00000399523 LINC00269Q8N2A0 174 aa11.28□□□□□ -0.6
UFD1-202ENST00000399523 CHCHD5Q9BSY4 110 aa11.28□□□□□ -0.6
UFD1-202ENST00000399523 NUDT15Q9NV35 164 aa11.28□□□□□ -0.6
UFD1-202ENST00000399523 A0A1W2PPV4 95 aa11.27□□□□□ -0.61
UFD1-202ENST00000399523 H0YIZ8 118 aa11.27□□□□□ -0.61
UFD1-202ENST00000399523 CLPSL2Q6UWE3 100 aa11.27□□□□□ -0.61
UFD1-202ENST00000399523 GTSF1Q8WW33 167 aa11.27□□□□□ -0.61
UFD1-202ENST00000399523 RBM38Q9H0Z9 239 aaKnown RBP11.27□□□□□ -0.61
UFD1-202ENST00000399523 AP5S1Q9NUS5 200 aa11.27□□□□□ -0.61
UFD1-202ENST00000399523 LYRM1O43325 122 aa11.26□□□□□ -0.61
UFD1-202ENST00000399523 RBX1P62877 108 aa11.26□□□□□ -0.61
UFD1-202ENST00000399523 SCGB1C1Q8TD33 95 aa11.26□□□□□ -0.61
UFD1-202ENST00000399523 EPDR1Q9UM22 224 aa11.26□□□□□ -0.61
UFD1-202ENST00000399523 FAT4Q6V0I7 4981 aa11.25□□□□□ -0.61
UFD1-202ENST00000399523 B4DEV8 164 aa11.25□□□□□ -0.61
UFD1-202ENST00000399523 HMGB3O15347 200 aaKnown RBP11.25□□□□□ -0.61
UFD1-202ENST00000399523 SUN5Q8TC36 379 aa11.25□□□□□ -0.61
UFD1-202ENST00000399523 KRBOX1C9JBD0 128 aa11.24□□□□□ -0.61
UFD1-202ENST00000399523 ARL14EPLP0DKL9 152 aa11.24□□□□□ -0.61
UFD1-202ENST00000399523 RAB2AP61019 212 aa11.24□□□□□ -0.61
UFD1-202ENST00000399523 SRSF9Q13242 221 aaKnown RBP eCLIP11.24□□□□□ -0.61
UFD1-202ENST00000399523 NTM-AS1Q6ZSK4 140 aa11.24□□□□□ -0.61
UFD1-202ENST00000399523 NEXN-AS1Q8NBZ9 246 aa11.24□□□□□ -0.61
UFD1-202ENST00000399523 H2AFB2P0C5Z0 115 aa11.23□□□□□ -0.61
UFD1-202ENST00000399523 SUMO1P63165 101 aaKnown RBP11.23□□□□□ -0.61
UFD1-202ENST00000399523 LRRC37A5PQ49AS3 106 aa11.23□□□□□ -0.61
UFD1-202ENST00000399523 PHLDA3Q9Y5J5 127 aa11.23□□□□□ -0.61
UFD1-202ENST00000399523 IGLV10-54A0A075B6I4 117 aa11.22□□□□□ -0.61
UFD1-202ENST00000399523 M0R381 172 aa11.22□□□□□ -0.61
UFD1-202ENST00000399523 RAB4BP61018 213 aa11.22□□□□□ -0.61
UFD1-202ENST00000399523 PRR27Q6MZM9 219 aa11.22□□□□□ -0.61
UFD1-202ENST00000399523 HSPB11Q9Y547 144 aa11.22□□□□□ -0.61
UFD1-202ENST00000399523 GRIFINA4D1Z8 144 aa11.21□□□□□ -0.61
UFD1-202ENST00000399523 SIX6O95475 246 aa11.21□□□□□ -0.61
UFD1-202ENST00000399523 STAG3L2P0CL84 134 aa11.21□□□□□ -0.61
UFD1-202ENST00000399523 STAG3L3P0CL85 134 aa11.21□□□□□ -0.61
UFD1-202ENST00000399523 COX6A2Q02221 97 aa11.21□□□□□ -0.61
UFD1-202ENST00000399523 REG3AQ06141 175 aa11.21□□□□□ -0.61
UFD1-202ENST00000399523 TMEM97Q5BJF2 176 aa11.21□□□□□ -0.61
UFD1-202ENST00000399523 ARL2-SNX15V9GYD0 113 aa11.21□□□□□ -0.61
UFD1-202ENST00000399523 TRAV8-4A0A0B4J246 113 aa11.2□□□□□ -0.62
UFD1-202ENST00000399523 MUC21A0A0G2JKD1 596 aa11.2□□□□□ -0.62
UFD1-202ENST00000399523 M0R036 132 aa11.2□□□□□ -0.62
UFD1-202ENST00000399523 P01737 135 aa11.2□□□□□ -0.62
UFD1-202ENST00000399523 TPT1P13693 172 aaKnown RBP11.2□□□□□ -0.62
UFD1-202ENST00000399523 GCHFRP30047 84 aa11.2□□□□□ -0.62
UFD1-202ENST00000399523 CRIP1P50238 77 aa11.2□□□□□ -0.62
UFD1-202ENST00000399523 GAGE6Q13070 117 aa11.2□□□□□ -0.62
UFD1-202ENST00000399523 MAJINQ3KP22 176 aa11.2□□□□□ -0.62
UFD1-202ENST00000399523 ZFP82Q8N141 532 aa11.2□□□□□ -0.62
UFD1-202ENST00000399523 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.2□□□□□ -0.62
UFD1-202ENST00000399523 VAX2Q9UIW0 290 aa11.2□□□□□ -0.62
UFD1-202ENST00000399523 TRAV34A0A0B4J273 112 aa11.19□□□□□ -0.62
UFD1-202ENST00000399523 NDUFS6O75380 124 aaKnown RBP11.19□□□□□ -0.62
UFD1-202ENST00000399523 LYPD6BQ8NI32 183 aa11.19□□□□□ -0.62
UFD1-202ENST00000399523 SMIM3Q9BZL3 60 aa11.19□□□□□ -0.62
UFD1-202ENST00000399523 CCDC160A6NGH7 325 aa11.18□□□□□ -0.62
UFD1-202ENST00000399523 GZMBP10144 247 aa11.18□□□□□ -0.62
UFD1-202ENST00000399523 CDC34P49427 236 aaPredicted RBP11.18□□□□□ -0.62
UFD1-202ENST00000399523 STPG4Q8N801 248 aa11.18□□□□□ -0.62
UFD1-202ENST00000399523 PRSS3P2Q8NHM4 247 aa11.18□□□□□ -0.62
UFD1-202ENST00000399523 CYCSP99999 105 aaKnown RBP11.17□□□□□ -0.62
UFD1-202ENST00000399523 COX8CQ7Z4L0 72 aa11.17□□□□□ -0.62
UFD1-202ENST00000399523 WFDC1Q9HC57 220 aa11.17□□□□□ -0.62
UFD1-202ENST00000399523 TRBV25-1A0A075B6N4 114 aa11.16□□□□□ -0.62
UFD1-202ENST00000399523 IGKV2-24A0A0C4DH68 120 aa11.16□□□□□ -0.62
UFD1-202ENST00000399523 TRBV6-1A0A0K0K1D8 114 aa11.16□□□□□ -0.62
UFD1-202ENST00000399523 A0A0U1RQV1 116 aa11.16□□□□□ -0.62
UFD1-202ENST00000399523 RPS10P46783 165 aaKnown RBP11.16□□□□□ -0.62
UFD1-202ENST00000399523 IQCJQ1A5X6 159 aa11.16□□□□□ -0.62
UFD1-202ENST00000399523 C20orf203Q8NBC4 194 aa11.16□□□□□ -0.62
UFD1-202ENST00000399523 RAB24Q969Q5 203 aa11.16□□□□□ -0.62
UFD1-202ENST00000399523 DERL1Q9BUN8 251 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms