RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 NDUFA11Q86Y39 141 aa12.47□□□□□ -0.41
ITSN1-209ENST00000399352 IGHV4-59P01825 116 aa12.47□□□□□ -0.41
ITSN1-209ENST00000399352 COL4A6Q14031 1691 aa12.47□□□□□ -0.41
ITSN1-209ENST00000399352 IGLV11-55A0A075B6I3 123 aa12.46□□□□□ -0.41
ITSN1-209ENST00000399352 Q8N1Y9 231 aa12.46□□□□□ -0.41
ITSN1-209ENST00000399352 PLXND1Q9Y4D7 1925 aa12.46□□□□□ -0.41
ITSN1-209ENST00000399352 DEFB1P60022 68 aa12.46□□□□□ -0.42
ITSN1-209ENST00000399352 AJUBAQ96IF1 538 aa12.46□□□□□ -0.42
ITSN1-209ENST00000399352 TRAV23DV6A0A075B6W5 121 aa12.46□□□□□ -0.42
ITSN1-209ENST00000399352 NPBQ8NG41 125 aa12.45□□□□□ -0.42
ITSN1-209ENST00000399352 ESM1Q9NQ30 184 aa12.45□□□□□ -0.42
ITSN1-209ENST00000399352 DSCAML1Q8TD84 2053 aa12.45□□□□□ -0.42
ITSN1-209ENST00000399352 IGKV2D-26A0A0A0MRZ7 120 aa12.45□□□□□ -0.42
ITSN1-209ENST00000399352 NDUFV3P56181 108 aaKnown RBP12.45□□□□□ -0.42
ITSN1-209ENST00000399352 TIMM17AQ99595 171 aa12.45□□□□□ -0.42
ITSN1-209ENST00000399352 CENPVL3A0A0U1RRI6 287 aa12.45□□□□□ -0.42
ITSN1-209ENST00000399352 PLA2G5P39877 138 aa12.45□□□□□ -0.42
ITSN1-209ENST00000399352 SLURP1P55000 103 aa12.45□□□□□ -0.42
ITSN1-209ENST00000399352 DEFB112Q30KQ8 113 aa12.44□□□□□ -0.42
ITSN1-209ENST00000399352 MIR7-3HGQ8N6C7 128 aa12.44□□□□□ -0.42
ITSN1-209ENST00000399352 MRPL36Q9P0J6 103 aaKnown RBP12.44□□□□□ -0.42
ITSN1-209ENST00000399352 IGHV3-30P01768 117 aa12.44□□□□□ -0.42
ITSN1-209ENST00000399352 IGHV3-33P01772 117 aa12.44□□□□□ -0.42
ITSN1-209ENST00000399352 IGHV3-30-3P0DP02 117 aa12.44□□□□□ -0.42
ITSN1-209ENST00000399352 IGHV3-30-5P0DP03 117 aa12.44□□□□□ -0.42
ITSN1-209ENST00000399352 CTRLP40313 264 aa12.44□□□□□ -0.42
ITSN1-209ENST00000399352 Q71RC1 249 aaPredicted RBP12.44□□□□□ -0.42
ITSN1-209ENST00000399352 LINC00643Q86TS7 51 aa12.44□□□□□ -0.42
ITSN1-209ENST00000399352 LYPD6Q86Y78 171 aa12.44□□□□□ -0.42
ITSN1-209ENST00000399352 DAZ2Q13117 558 aaKnown RBP12.44□□□□□ -0.42
ITSN1-209ENST00000399352 DAZ4Q86SG3 579 aaKnown RBP12.44□□□□□ -0.42
ITSN1-209ENST00000399352 DAZ3Q9NR90 486 aaKnown RBP12.44□□□□□ -0.42
ITSN1-209ENST00000399352 WDR90Q96KV7 1748 aa12.43□□□□□ -0.42
ITSN1-209ENST00000399352 NDUFB1O75438 58 aa12.43□□□□□ -0.42
ITSN1-209ENST00000399352 TNRC6AQ8NDV7 1962 aaKnown RBP12.43□□□□□ -0.42
ITSN1-209ENST00000399352 C16orf54Q6UWD8 224 aa12.43□□□□□ -0.42
ITSN1-209ENST00000399352 SPTSSBQ8NFR3 76 aa12.42□□□□□ -0.42
ITSN1-209ENST00000399352 PLXNA3P51805 1871 aa12.42□□□□□ -0.42
ITSN1-209ENST00000399352 IGFL3Q6UXB1 125 aa12.42□□□□□ -0.42
ITSN1-209ENST00000399352 RLFQ13129 1914 aa12.41□□□□□ -0.42
ITSN1-209ENST00000399352 TEX49A0A1B0GTD5 131 aa12.41□□□□□ -0.42
ITSN1-209ENST00000399352 K7ENP7 123 aa12.41□□□□□ -0.42
ITSN1-209ENST00000399352 HIGD2BQ4VC39 106 aa12.41□□□□□ -0.42
ITSN1-209ENST00000399352 C20orf197Q8N268 126 aa12.41□□□□□ -0.42
ITSN1-209ENST00000399352 IGHV1-58A0A0C4DH39 117 aa12.41□□□□□ -0.42
ITSN1-209ENST00000399352 E7EUB6 86 aa12.41□□□□□ -0.42
ITSN1-209ENST00000399352 MPLKIPQ8TAP9 179 aa12.41□□□□□ -0.42
ITSN1-209ENST00000399352 PIFOQ8TCI5 191 aa12.41□□□□□ -0.42
ITSN1-209ENST00000399352 BLCAPP62952 87 aa12.41□□□□□ -0.42
ITSN1-209ENST00000399352 WI2-2373I1.2A0A1W2PRP0 233 aa12.4□□□□□ -0.42
ITSN1-209ENST00000399352 SIP14410 1827 aa12.4□□□□□ -0.42
ITSN1-209ENST00000399352 J3QLI3 93 aa12.4□□□□□ -0.42
ITSN1-209ENST00000399352 ZNF503Q96F45 646 aa12.4□□□□□ -0.42
ITSN1-209ENST00000399352 C19orf71A6NCJ1 209 aa12.4□□□□□ -0.42
ITSN1-209ENST00000399352 CCL24O00175 119 aa12.4□□□□□ -0.42
ITSN1-209ENST00000399352 CEMP1Q6PRD7 247 aaPredicted RBP12.4□□□□□ -0.42
ITSN1-209ENST00000399352 PROP1O75360 226 aa12.4□□□□□ -0.43
ITSN1-209ENST00000399352 TRBV12-3P01733 135 aa12.4□□□□□ -0.43
ITSN1-209ENST00000399352 C9orf47Q6ZRZ4 202 aa12.4□□□□□ -0.43
ITSN1-209ENST00000399352 NFE4Q86UQ8 179 aa12.4□□□□□ -0.43
ITSN1-209ENST00000399352 TRBV7-3A0A075B6L6 115 aa12.39□□□□□ -0.43
ITSN1-209ENST00000399352 TEX22C9J3V5 150 aa12.39□□□□□ -0.43
ITSN1-209ENST00000399352 TIRAPP58753 221 aa12.39□□□□□ -0.43
ITSN1-209ENST00000399352 DKK4Q9UBT3 224 aa12.39□□□□□ -0.43
ITSN1-209ENST00000399352 IGLV2-14P01704 120 aa12.39□□□□□ -0.43
ITSN1-209ENST00000399352 GRNP28799 593 aaKnown RBP12.39□□□□□ -0.43
ITSN1-209ENST00000399352 SDIM1Q6ZPB5 146 aa12.39□□□□□ -0.43
ITSN1-209ENST00000399352 VPREB3Q9UKI3 123 aa12.39□□□□□ -0.43
ITSN1-209ENST00000399352 PLXNA4Q9HCM2 1894 aa12.39□□□□□ -0.43
ITSN1-209ENST00000399352 ATP5G1P05496 136 aa12.39□□□□□ -0.43
ITSN1-209ENST00000399352 SEM1Q6ZVN7 128 aa12.39□□□□□ -0.43
ITSN1-209ENST00000399352 C16orf74Q96GX8 76 aa12.39□□□□□ -0.43
ITSN1-209ENST00000399352 SPANXB1Q9NS25 103 aaPredicted RBP12.39□□□□□ -0.43
ITSN1-209ENST00000399352 IGLC6P0CF74 106 aa12.38□□□□□ -0.43
ITSN1-209ENST00000399352 A0A0U1RQV1 116 aa12.38□□□□□ -0.43
ITSN1-209ENST00000399352 UPK3BQ9BT76 320 aa12.38□□□□□ -0.43
ITSN1-209ENST00000399352 TMEM256-PLSCR3K7ERE1 68 aa12.38□□□□□ -0.43
ITSN1-209ENST00000399352 FAM110AQ9BQ89 295 aa12.38□□□□□ -0.43
ITSN1-209ENST00000399352 GDF5OSQ5U4N7 250 aa12.37□□□□□ -0.43
ITSN1-209ENST00000399352 C20orf203Q8NBC4 194 aa12.37□□□□□ -0.43
ITSN1-209ENST00000399352 DIRC1Q969H9 104 aa12.37□□□□□ -0.43
ITSN1-209ENST00000399352 A0A1B0GXF2 115 aa12.36□□□□□ -0.43
ITSN1-209ENST00000399352 LINC00322Q6ZN03 302 aaPredicted RBP12.36□□□□□ -0.43
ITSN1-209ENST00000399352 IGHV4-38-2P0DP08 117 aa12.36□□□□□ -0.43
ITSN1-209ENST00000399352 RNF152Q8N8N0 203 aa12.36□□□□□ -0.43
ITSN1-209ENST00000399352 UQCRQO14949 82 aa12.36□□□□□ -0.43
ITSN1-209ENST00000399352 KRTAP27-1Q3LI81 207 aa12.36□□□□□ -0.43
ITSN1-209ENST00000399352 MDFICQ9P1T7 246 aa12.36□□□□□ -0.43
ITSN1-209ENST00000399352 MIAQ16674 131 aa12.36□□□□□ -0.43
ITSN1-209ENST00000399352 NDUFA1O15239 70 aa12.35□□□□□ -0.43
ITSN1-209ENST00000399352 Q6ZSR3 168 aa12.35□□□□□ -0.43
ITSN1-209ENST00000399352 Q8N9W7 124 aa12.35□□□□□ -0.43
ITSN1-209ENST00000399352 C11orf1Q9H5F2 150 aa12.35□□□□□ -0.43
ITSN1-209ENST00000399352 PKIGQ9Y2B9 76 aa12.35□□□□□ -0.43
ITSN1-209ENST00000399352 H3BQ85 93 aa12.34□□□□□ -0.43
ITSN1-209ENST00000399352 SPAG11BQ08648 103 aa12.34□□□□□ -0.43
ITSN1-209ENST00000399352 A0A0J9YXY3 114 aa12.34□□□□□ -0.43
ITSN1-209ENST00000399352 IGLV2-8P01709 118 aa12.33□□□□□ -0.43
ITSN1-209ENST00000399352 ZNF80P51504 273 aaPredicted RBP12.33□□□□□ -0.44
ITSN1-209ENST00000399352 RBX1P62877 108 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms