RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 DSCAMO60469 2012 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 ZNF833PQ6ZTB9 187 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 ZNF747Q9BV97 191 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 NDUFA4L2Q9NRX3 87 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 ELANEP08246 267 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 C9orf66Q5T8R8 295 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 DYNAPQ8N1N2 210 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 TAX1BP3O14907 124 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 RNF138Q8WVD3 245 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 SMR3AQ99954 134 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 TANC1Q9C0D5 1861 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 A4D1N5 150 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 FOXI1Q12951 378 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 SEM1Q6ZVN7 128 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 TMEM14BQ9NUH8 114 aa7.3□□□□□ -1.24
ATL3-201ENST00000398868 SORL1Q92673 2214 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 KIR2DL5BA0A0G2JN68 375 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 KIR2DL5BA0A0G2JPC4 375 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 KIR2DL5AQ8N109 375 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 CCL18P55774 89 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 LYPD6BQ8NI32 183 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 TMEM131Q92545 1883 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 TRBV12-3P01733 135 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 AJUBAQ96IF1 538 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 TRAV4A0A0B4J268 109 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 TMEM61Q8N0U2 210 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 WDR87Q6ZQQ6 2873 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 FXYD5Q96DB9 178 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 NOTCH2Q04721 2471 aa7.29□□□□□ -1.24
ATL3-201ENST00000398868 ATOX1O00244 68 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 LECT2O14960 151 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 SIVA1O15304 175 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 NDUFV3P56181 108 aaKnown RBP7.28□□□□□ -1.24
ATL3-201ENST00000398868 IGFL3Q6UXB1 125 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 ZFP2Q6ZN57 461 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 CEP192Q8TEP8 1941 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 ZNF503Q96F45 646 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 A0A1W2PNU3 283 aaPredicted RBP7.28□□□□□ -1.24
ATL3-201ENST00000398868 NDUFA4O00483 81 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 TIRAPP58753 221 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 TP73-AS1Q9UF72 201 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 PCNX3Q9H6A9 2034 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.28□□□□□ -1.24
ATL3-201ENST00000398868 MT-ATP8P03928 68 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 ARHGAP32A7KAX9 2087 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 J3QLI3 93 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 RNF5Q99942 180 aa7.28□□□□□ -1.24
ATL3-201ENST00000398868 OBSL1O75147 1896 aa7.27□□□□□ -1.25
ATL3-201ENST00000398868 LOXL1Q08397 574 aaPredicted RBP7.27□□□□□ -1.25
ATL3-201ENST00000398868 IGKV2D-26A0A0A0MRZ7 120 aa7.27□□□□□ -1.25
ATL3-201ENST00000398868 HERVK_113P63121 156 aa7.27□□□□□ -1.25
ATL3-201ENST00000398868 LINC00482Q8N8I6 264 aa7.27□□□□□ -1.25
ATL3-201ENST00000398868 FANCD2OSQ96PS1 177 aa7.27□□□□□ -1.25
ATL3-201ENST00000398868 CSPG4Q6UVK1 2322 aa7.27□□□□□ -1.25
ATL3-201ENST00000398868 FRMD6-AS1P0C7T7 363 aa7.27□□□□□ -1.25
ATL3-201ENST00000398868 VOPP1Q96AW1 172 aa7.27□□□□□ -1.25
ATL3-201ENST00000398868 TECTAO75443 2155 aa7.26□□□□□ -1.25
ATL3-201ENST00000398868 RPL39P62891 51 aaKnown RBP7.26□□□□□ -1.25
ATL3-201ENST00000398868 PDE6HQ13956 83 aa7.26□□□□□ -1.25
ATL3-201ENST00000398868 HIGD2BQ4VC39 106 aa7.26□□□□□ -1.25
ATL3-201ENST00000398868 SDIM1Q6ZPB5 146 aa7.26□□□□□ -1.25
ATL3-201ENST00000398868 CAMK2N2Q96S95 79 aa7.26□□□□□ -1.25
ATL3-201ENST00000398868 MSRB1Q9NZV6 116 aa7.26□□□□□ -1.25
ATL3-201ENST00000398868 CENPFP49454 3210 aa7.26□□□□□ -1.25
ATL3-201ENST00000398868 MRPL55Q7Z7F7 128 aaKnown RBP7.26□□□□□ -1.25
ATL3-201ENST00000398868 MRPL53Q96EL3 112 aaKnown RBP7.26□□□□□ -1.25
ATL3-201ENST00000398868 PLA2G5P39877 138 aa7.26□□□□□ -1.25
ATL3-201ENST00000398868 SCXQ7RTU7 201 aa7.26□□□□□ -1.25
ATL3-201ENST00000398868 C20orf78Q9BR46 151 aa7.26□□□□□ -1.25
ATL3-201ENST00000398868 PLXNB3Q9ULL4 1909 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 DNAJC9-AS1A6NH13 148 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 LGALS9O00182 355 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 UBE2AP49459 152 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 POU2AF1Q16633 256 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 TEN1Q86WV5 123 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 RNF152Q8N8N0 203 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 VSIG2Q96IQ7 327 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 TM2D2Q9BX73 214 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 KLK12Q9UKR0 248 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 A0A0J9YWU9 116 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 H3BRN7 92 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 C15orf65H3BRN8 121 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 FHL1Q13642 323 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 RMI2Q96E14 147 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 NREPQ16612 68 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 HIVEP3Q5T1R4 2406 aa7.25□□□□□ -1.25
ATL3-201ENST00000398868 LINC01620Q4KN68 170 aa7.24□□□□□ -1.25
ATL3-201ENST00000398868 SND1-IT1Q9HBX3 110 aa7.24□□□□□ -1.25
ATL3-201ENST00000398868 WI2-2373I1.2A0A1W2PRP0 233 aa7.24□□□□□ -1.25
ATL3-201ENST00000398868 RSPO1Q2MKA7 263 aaPredicted RBP7.24□□□□□ -1.25
ATL3-201ENST00000398868 PLXNB1O43157 2135 aa7.24□□□□□ -1.25
ATL3-201ENST00000398868 SPART-AS1P0CW21 52 aa7.24□□□□□ -1.25
ATL3-201ENST00000398868 SMAD5-AS1Q9Y6J3 95 aa7.24□□□□□ -1.25
ATL3-201ENST00000398868 FAM231DQ6ZW35 169 aa7.23□□□□□ -1.25
ATL3-201ENST00000398868 C10orf105Q8TEF2 133 aa7.23□□□□□ -1.25
ATL3-201ENST00000398868 PLA2G2EQ9NZK7 142 aa7.23□□□□□ -1.25
ATL3-201ENST00000398868 HHLA3Q9XRX5 114 aa7.23□□□□□ -1.25
ATL3-201ENST00000398868 V9GYY9 64 aa7.23□□□□□ -1.25
ATL3-201ENST00000398868 NUP210Q8TEM1 1887 aaPredicted RBP7.23□□□□□ -1.25
ATL3-201ENST00000398868 ATP5G1P05496 136 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms