RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 C16orf92Q96LL3 132 aa6.25□□□□□ -1.41
TCF4-203ENST00000398339 C20orf173Q96LM9 149 aa6.25□□□□□ -1.41
TCF4-203ENST00000398339 PKIGQ9Y2B9 76 aa6.25□□□□□ -1.41
TCF4-203ENST00000398339 ADGRG4Q8IZF6 3080 aa6.25□□□□□ -1.41
TCF4-203ENST00000398339 MAP1BP46821 2468 aaKnown RBP6.25□□□□□ -1.41
TCF4-203ENST00000398339 ZNF561-AS1K7EIQ3 104 aa6.25□□□□□ -1.41
TCF4-203ENST00000398339 MGPP08493 103 aa6.25□□□□□ -1.41
TCF4-203ENST00000398339 C6orf226Q5I0X4 101 aa6.25□□□□□ -1.41
TCF4-203ENST00000398339 TEN1Q86WV5 123 aa6.25□□□□□ -1.41
TCF4-203ENST00000398339 NDUFA11Q86Y39 141 aa6.25□□□□□ -1.41
TCF4-203ENST00000398339 TMEM86BQ8N661 226 aa6.25□□□□□ -1.41
TCF4-203ENST00000398339 ZFAND2AQ8N6M9 145 aa6.25□□□□□ -1.41
TCF4-203ENST00000398339 SPTBN4Q9H254 2564 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 IGLV4-69A0A075B6H9 119 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 TRAV21A0A0B4J279 112 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 A0A0J9YY99 117 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 C11orf86A6NJI1 115 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 DUSP14O95147 198 aaKnown RBP6.24□□□□□ -1.41
TCF4-203ENST00000398339 TCL1BO95988 128 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 ZNF688P0C7X2 276 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 S100A4P26447 101 aaKnown RBP6.24□□□□□ -1.41
TCF4-203ENST00000398339 ASIPP42127 132 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 Q5XG85 94 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 C9orf139Q6ZV77 190 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 SBSPONQ8IVN8 264 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 PHLDA3Q9Y5J5 127 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 APC2O95996 2303 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 MGAQ8IWI9 3026 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 TRBV7-1A0A0A6YYK4 115 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 LINC01548A6NM66 108 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 G3V318 75 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 HERVK_113P61574 105 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 TRPT1Q86TN4 253 aaKnown RBP6.24□□□□□ -1.41
TCF4-203ENST00000398339 GPHB5Q86YW7 130 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 SPANXCQ9NY87 97 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 TACC2O95359 2948 aa6.24□□□□□ -1.41
TCF4-203ENST00000398339 OTOGLQ3ZCN5 2332 aa6.23□□□□□ -1.41
TCF4-203ENST00000398339 PPP1R17O96001 155 aa6.23□□□□□ -1.41
TCF4-203ENST00000398339 TSHBP01222 138 aa6.23□□□□□ -1.41
TCF4-203ENST00000398339 MED14OSP0DP75 135 aa6.23□□□□□ -1.41
TCF4-203ENST00000398339 GRNP28799 593 aaKnown RBP6.23□□□□□ -1.41
TCF4-203ENST00000398339 NBL1P41271 181 aa6.23□□□□□ -1.41
TCF4-203ENST00000398339 POLEQ07864 2286 aa6.23□□□□□ -1.41
TCF4-203ENST00000398339 CNOT1A5YKK6 2376 aaKnown RBP6.23□□□□□ -1.41
TCF4-203ENST00000398339 EP300Q09472 2414 aaPredicted RBP6.23□□□□□ -1.41
TCF4-203ENST00000398339 IGHV1-69DA0A0B4J2H0 117 aa6.23□□□□□ -1.41
TCF4-203ENST00000398339 IGHV3-30P01768 117 aa6.23□□□□□ -1.41
TCF4-203ENST00000398339 IGHV3-30-5P0DP03 117 aa6.23□□□□□ -1.41
TCF4-203ENST00000398339 PAPPA-AS1Q5QFB9 102 aa6.23□□□□□ -1.41
TCF4-203ENST00000398339 POM121L12Q8N7R1 296 aa6.23□□□□□ -1.41
TCF4-203ENST00000398339 FAM236AA0A1B0GUQ0 79 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 FAM236BA0A1B0GV22 79 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 A8MWV9 139 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 CFC1BP0CG36 223 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 CFC1P0CG37 223 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 ZFP36P26651 326 aaKnown RBP6.22□□□□□ -1.41
TCF4-203ENST00000398339 C9orf153Q5TBE3 101 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 Q6ZS46 218 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 WNK2Q9Y3S1 2297 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 IGIPA6NJ69 53 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 OVOL1O14753 267 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 TSPEAR-AS2P59090 65 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 PMVKQ15126 192 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 C10orf126Q8N4M7 172 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 TP53TG1Q9Y2A0 90 aa6.22□□□□□ -1.41
TCF4-203ENST00000398339 KLK5Q9Y337 293 aaPredicted RBP6.22□□□□□ -1.41
TCF4-203ENST00000398339 GNRH2O43555 120 aa6.21□□□□□ -1.41
TCF4-203ENST00000398339 RNASE3P12724 160 aaKnown RBP6.21□□□□□ -1.41
TCF4-203ENST00000398339 RNASE4P34096 147 aaKnown RBP6.21□□□□□ -1.41
TCF4-203ENST00000398339 ANKRD29Q8N6D5 301 aa6.21□□□□□ -1.41
TCF4-203ENST00000398339 SLC25A29Q8N8R3 303 aa6.21□□□□□ -1.41
TCF4-203ENST00000398339 NXPH4O95158 308 aa6.21□□□□□ -1.42
TCF4-203ENST00000398339 LINC00315P59091 139 aa6.21□□□□□ -1.42
TCF4-203ENST00000398339 DEFB1P60022 68 aa6.21□□□□□ -1.42
TCF4-203ENST00000398339 TMEM141Q96I45 108 aa6.21□□□□□ -1.42
TCF4-203ENST00000398339 FAM19A4Q96LR4 140 aa6.21□□□□□ -1.42
TCF4-203ENST00000398339 JPT2Q9H910 190 aa6.21□□□□□ -1.42
TCF4-203ENST00000398339 LAMA5O15230 3695 aa6.21□□□□□ -1.42
TCF4-203ENST00000398339 IGHV4OR15-8A0A075B7B6 117 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 A0A087WW49 117 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 SOCS3O14543 225 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 SCGB1C2P0DMR2 95 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 C11orf71Q6IPW1 123 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 AMELXQ99217 191 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 CHCHD5Q9BSY4 110 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 PRO1854Q9UHT4 67 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 KIF25-AS1Q9Y6Z4 181 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 GVINP1Q7Z2Y8 2422 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 DMXL1Q9Y485 3027 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 UBE2E1P51965 193 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 POLR2KP53803 58 aaKnown RBP6.2□□□□□ -1.42
TCF4-203ENST00000398339 RPL39P62891 51 aaKnown RBP6.2□□□□□ -1.42
TCF4-203ENST00000398339 FBXL19-AS1Q494R0 122 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 APRG1Q8IVJ8 170 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 TIMM17AQ99595 171 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 BSNQ9UPA5 3926 aa6.2□□□□□ -1.42
TCF4-203ENST00000398339 M0R2P5 195 aa6.19□□□□□ -1.42
TCF4-203ENST00000398339 TMEM170BQ5T4T1 132 aa6.19□□□□□ -1.42
TCF4-203ENST00000398339 C3orf22Q8N5N4 141 aa6.19□□□□□ -1.42
TCF4-203ENST00000398339 CACNA1AO00555 2505 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms