RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PPBPP02775 128 aa13.99□□□□□ -0.17
PDLIM2-205ENST00000397761 Q0VG73 95 aa13.99□□□□□ -0.17
PDLIM2-205ENST00000397761 LGALS9BQ3B8N2 356 aa13.99□□□□□ -0.17
PDLIM2-205ENST00000397761 JPT2Q9H910 190 aa13.99□□□□□ -0.17
PDLIM2-205ENST00000397761 CRYGDP07320 174 aa13.99□□□□□ -0.17
PDLIM2-205ENST00000397761 A8MWV9 139 aa13.98□□□□□ -0.17
PDLIM2-205ENST00000397761 D6R8Y8 96 aa13.98□□□□□ -0.17
PDLIM2-205ENST00000397761 OR10J3Q5JRS4 329 aa13.98□□□□□ -0.17
PDLIM2-205ENST00000397761 ORMDL3Q8N138 153 aa13.98□□□□□ -0.17
PDLIM2-205ENST00000397761 C18orf32Q8TCD1 76 aa13.98□□□□□ -0.17
PDLIM2-205ENST00000397761 UFSP1Q6NVU6 142 aa13.97□□□□□ -0.17
PDLIM2-205ENST00000397761 MRAP2Q96G30 205 aa13.97□□□□□ -0.17
PDLIM2-205ENST00000397761 MRPL16Q9NX20 251 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-205ENST00000397761 TP53TG1Q9Y2A0 90 aa13.97□□□□□ -0.17
PDLIM2-205ENST00000397761 K7EIL1 84 aa13.96□□□□□ -0.17
PDLIM2-205ENST00000397761 SMIM17P0DL12 118 aa13.96□□□□□ -0.17
PDLIM2-205ENST00000397761 CKS2P33552 79 aa13.96□□□□□ -0.17
PDLIM2-205ENST00000397761 OR11H2Q8NH07 326 aa13.96□□□□□ -0.17
PDLIM2-205ENST00000397761 SAMD10Q9BYL1 202 aa13.96□□□□□ -0.17
PDLIM2-205ENST00000397761 LAMTOR2Q9Y2Q5 125 aa13.96□□□□□ -0.17
PDLIM2-205ENST00000397761 C5orf52A6NGY3 159 aa13.95□□□□□ -0.18
PDLIM2-205ENST00000397761 S100A6P06703 90 aa13.95□□□□□ -0.18
PDLIM2-205ENST00000397761 NDUFA6P56556 154 aa13.95□□□□□ -0.18
PDLIM2-205ENST00000397761 NOP10Q9NPE3 64 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-205ENST00000397761 A0A087WWL8 130 aa13.94□□□□□ -0.18
PDLIM2-205ENST00000397761 RS1O15537 224 aa13.94□□□□□ -0.18
PDLIM2-205ENST00000397761 MIFP14174 115 aa13.94□□□□□ -0.18
PDLIM2-205ENST00000397761 CFAP126Q5VTH2 177 aa13.94□□□□□ -0.18
PDLIM2-205ENST00000397761 Q6ZTI0 123 aa13.94□□□□□ -0.18
PDLIM2-205ENST00000397761 PRELID3AQ96N28 172 aa13.94□□□□□ -0.18
PDLIM2-205ENST00000397761 TRGV1A0A0A0MS02 117 aa13.93□□□□□ -0.18
PDLIM2-205ENST00000397761 GAS8-AS1O95177 125 aa13.93□□□□□ -0.18
PDLIM2-205ENST00000397761 LINC00612Q8N6U2 182 aa13.93□□□□□ -0.18
PDLIM2-205ENST00000397761 Q8NAQ8 132 aa13.93□□□□□ -0.18
PDLIM2-205ENST00000397761 SMKR1H3BMG3 65 aa13.93□□□□□ -0.18
PDLIM2-205ENST00000397761 NCR2O95944 276 aa13.93□□□□□ -0.18
PDLIM2-205ENST00000397761 LINC00310P59036 64 aa13.93□□□□□ -0.18
PDLIM2-205ENST00000397761 NRACQ8N912 160 aa13.93□□□□□ -0.18
PDLIM2-205ENST00000397761 EDA2RQ9HAV5 297 aa13.93□□□□□ -0.18
PDLIM2-205ENST00000397761 RHODO00212 210 aa13.92□□□□□ -0.18
PDLIM2-205ENST00000397761 NPYP01303 97 aa13.92□□□□□ -0.18
PDLIM2-205ENST00000397761 PRB2P02812 416 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-205ENST00000397761 MGPP08493 103 aa13.92□□□□□ -0.18
PDLIM2-205ENST00000397761 SNRPEP62304 92 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-205ENST00000397761 ZFP2Q6ZN57 461 aa13.92□□□□□ -0.18
PDLIM2-205ENST00000397761 TENM3Q9P273 2699 aa13.91□□□□□ -0.18
PDLIM2-205ENST00000397761 TRAV26-2A0A0B4J265 109 aa13.91□□□□□ -0.18
PDLIM2-205ENST00000397761 GATA1P15976 413 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-205ENST00000397761 HOXA5P20719 270 aa13.91□□□□□ -0.18
PDLIM2-205ENST00000397761 IQCJQ1A5X6 159 aa13.91□□□□□ -0.18
PDLIM2-205ENST00000397761 FAM74A4Q5TZK3 123 aa13.91□□□□□ -0.18
PDLIM2-205ENST00000397761 C18orf15Q96N68 181 aa13.91□□□□□ -0.18
PDLIM2-205ENST00000397761 IGHV4-28A0A0C4DH34 117 aa13.9□□□□□ -0.18
PDLIM2-205ENST00000397761 PRSS47A8MTI9 375 aa13.9□□□□□ -0.18
PDLIM2-205ENST00000397761 TNFRSF6BO95407 300 aa13.9□□□□□ -0.18
PDLIM2-205ENST00000397761 ESDP10768 282 aa13.9□□□□□ -0.18
PDLIM2-205ENST00000397761 SUMO4Q6EEV6 95 aa13.9□□□□□ -0.18
PDLIM2-205ENST00000397761 TRAV4A0A0B4J268 109 aa13.89□□□□□ -0.19
PDLIM2-205ENST00000397761 BAGE3Q86Y29 109 aa13.89□□□□□ -0.19
PDLIM2-205ENST00000397761 LYRM9A8MSI8 78 aa13.88□□□□□ -0.19
PDLIM2-205ENST00000397761 M0QY20 66 aa13.88□□□□□ -0.19
PDLIM2-205ENST00000397761 SERF1AO75920 110 aa13.88□□□□□ -0.19
PDLIM2-205ENST00000397761 PPP1R17O96001 155 aa13.88□□□□□ -0.19
PDLIM2-205ENST00000397761 URB1-AS1Q96HZ7 61 aa13.88□□□□□ -0.19
PDLIM2-205ENST00000397761 F5H697 171 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 ZNF56Q15929 161 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 OR4C5Q8NGB2 326 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 GAGE12BA1L429 117 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 NUPR1O60356 82 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 CIDEAO60543 219 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 GAGE7O76087 117 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 IGHV3-53P01767 116 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 GAGE12FP0CL80 117 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 GAGE12GP0CL81 117 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 GAGE12IP0CL82 117 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 EMP1P54849 157 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 HIST3H2BBQ8N257 126 aa13.87□□□□□ -0.19
PDLIM2-205ENST00000397761 NIT1Q86X76 327 aa13.86□□□□□ -0.19
PDLIM2-205ENST00000397761 SBSPONQ8IVN8 264 aa13.86□□□□□ -0.19
PDLIM2-205ENST00000397761 RPL39LQ96EH5 51 aaKnown RBP13.86□□□□□ -0.19
PDLIM2-205ENST00000397761 C20orf78Q9BR46 151 aa13.86□□□□□ -0.19
PDLIM2-205ENST00000397761 MAP1LC3AQ9H492 121 aa13.86□□□□□ -0.19
PDLIM2-205ENST00000397761 DKK2Q9UBU2 259 aa13.86□□□□□ -0.19
PDLIM2-205ENST00000397761 TRBV6-5A0A0K0K1A5 114 aa13.85□□□□□ -0.19
PDLIM2-205ENST00000397761 LOC105371267A0A1B0GV96 52 aa13.85□□□□□ -0.19
PDLIM2-205ENST00000397761 FAM222AQ5U5X8 452 aa13.85□□□□□ -0.19
PDLIM2-205ENST00000397761 ZNF479Q96JC4 524 aa13.85□□□□□ -0.19
PDLIM2-205ENST00000397761 RETNQ9HD89 108 aa13.85□□□□□ -0.19
PDLIM2-205ENST00000397761 IGLV2-18A0A075B6J9 118 aa13.84□□□□□ -0.19
PDLIM2-205ENST00000397761 LINC01546A6NGU7 62 aa13.84□□□□□ -0.19
PDLIM2-205ENST00000397761 H7C1H1 209 aa13.84□□□□□ -0.19
PDLIM2-205ENST00000397761 RPL32P62910 135 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-205ENST00000397761 Q6ZSN1 163 aa13.84□□□□□ -0.19
PDLIM2-205ENST00000397761 CHCHD1Q96BP2 118 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-205ENST00000397761 TM2D3Q9BRN9 247 aa13.84□□□□□ -0.19
PDLIM2-205ENST00000397761 TRGV2A0A075B6R0 118 aa13.83□□□□□ -0.2
PDLIM2-205ENST00000397761 IGHV3-73A0A0B4J1V6 119 aa13.83□□□□□ -0.2
PDLIM2-205ENST00000397761 IFITM10A6NMD0 228 aa13.83□□□□□ -0.2
PDLIM2-205ENST00000397761 LINC00614P0C842 121 aa13.83□□□□□ -0.2
PDLIM2-205ENST00000397761 IFI27P40305 119 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms