RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 C9orf85Q96MD7 179 aa9.54□□□□□ -0.88
SEC13-209ENST00000397117 GSN-AS1Q9NRJ2 163 aa9.54□□□□□ -0.88
SEC13-209ENST00000397117 TRAPPC1Q9Y5R8 145 aa9.54□□□□□ -0.88
SEC13-209ENST00000397117 SPRY2O43597 315 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 MT-ND6P03923 174 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 TRGC1P0CF51 173 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 AZU1P20160 251 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 NDUFA6P56556 154 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 Q6ZWC4 215 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 C16orf74Q96GX8 76 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 IGHV4-4A0A075B6R2 117 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 HLA-DQA1P01909 254 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 COA6Q5JTJ3 125 aaKnown RBP9.53□□□□□ -0.88
SEC13-209ENST00000397117 ZNF493Q6ZR52 646 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 TMEM136Q6ZRR5 245 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 HIST3H2BBQ8N257 126 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 RNASE8Q8TDE3 154 aaKnown RBP9.53□□□□□ -0.88
SEC13-209ENST00000397117 SPXQ9BT56 116 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 MSRB1Q9NZV6 116 aa9.53□□□□□ -0.88
SEC13-209ENST00000397117 FRAS1Q86XX4 4008 aa9.52□□□□□ -0.89
SEC13-209ENST00000397117 SMIM9A6NGZ8 99 aa9.52□□□□□ -0.89
SEC13-209ENST00000397117 PCP4L1A6NKN8 68 aa9.52□□□□□ -0.89
SEC13-209ENST00000397117 DMRTA1Q5VZB9 504 aa9.52□□□□□ -0.89
SEC13-209ENST00000397117 C11orf72Q8NBR9 251 aa9.52□□□□□ -0.89
SEC13-209ENST00000397117 MRPL18Q9H0U6 180 aaKnown RBP9.52□□□□□ -0.89
SEC13-209ENST00000397117 M0R2P5 195 aa9.51□□□□□ -0.89
SEC13-209ENST00000397117 NXPH4O95158 308 aa9.51□□□□□ -0.89
SEC13-209ENST00000397117 APCSP02743 223 aa9.51□□□□□ -0.89
SEC13-209ENST00000397117 ZNF876PQ49A33 203 aa9.51□□□□□ -0.89
SEC13-209ENST00000397117 OR11H2Q8NH07 326 aa9.51□□□□□ -0.89
SEC13-209ENST00000397117 RNF183Q96D59 192 aa9.51□□□□□ -0.89
SEC13-209ENST00000397117 AP1S3Q96PC3 154 aa9.5□□□□□ -0.89
SEC13-209ENST00000397117 TMEM191AQ9H0A3 160 aa9.5□□□□□ -0.89
SEC13-209ENST00000397117 SMIM17P0DL12 118 aa9.49□□□□□ -0.89
SEC13-209ENST00000397117 GATD1Q8NB37 220 aa9.49□□□□□ -0.89
SEC13-209ENST00000397117 LINC00476Q8WZB0 136 aa9.49□□□□□ -0.89
SEC13-209ENST00000397117 EVI2AP22794 236 aa9.49□□□□□ -0.89
SEC13-209ENST00000397117 S100A2P29034 98 aa9.49□□□□□ -0.89
SEC13-209ENST00000397117 EMP1P54849 157 aa9.49□□□□□ -0.89
SEC13-209ENST00000397117 CTAG1AP78358 180 aa9.49□□□□□ -0.89
SEC13-209ENST00000397117 PTH2Q96A98 100 aa9.49□□□□□ -0.89
SEC13-209ENST00000397117 NOP10Q9NPE3 64 aaKnown RBP9.49□□□□□ -0.89
SEC13-209ENST00000397117 NIT2Q9NQR4 276 aa9.49□□□□□ -0.89
SEC13-209ENST00000397117 X6R8D5 127 aa9.49□□□□□ -0.89
SEC13-209ENST00000397117 TRGV1A0A0A0MS02 117 aa9.48□□□□□ -0.89
SEC13-209ENST00000397117 DAZ2Q13117 558 aaKnown RBP9.48□□□□□ -0.89
SEC13-209ENST00000397117 SLAQ13239 276 aa9.48□□□□□ -0.89
SEC13-209ENST00000397117 PIK3CD-AS1Q5SR53 167 aa9.48□□□□□ -0.89
SEC13-209ENST00000397117 FAM104BQ5XKR9 115 aa9.48□□□□□ -0.89
SEC13-209ENST00000397117 C14orf178Q8N769 122 aaPredicted RBP9.48□□□□□ -0.89
SEC13-209ENST00000397117 TP53TG1Q9Y2A0 90 aa9.48□□□□□ -0.89
SEC13-209ENST00000397117 MIFP14174 115 aa9.47□□□□□ -0.89
SEC13-209ENST00000397117 PYY3Q5JQD4 70 aa9.47□□□□□ -0.89
SEC13-209ENST00000397117 AMN1Q8IY45 258 aa9.47□□□□□ -0.89
SEC13-209ENST00000397117 DPH3P1Q9H4G8 78 aa9.47□□□□□ -0.89
SEC13-209ENST00000397117 MRPL16Q9NX20 251 aaKnown RBP9.47□□□□□ -0.89
SEC13-209ENST00000397117 HERC2O95714 4834 aa9.47□□□□□ -0.89
SEC13-209ENST00000397117 MUC4Q99102 2169 aa9.47□□□□□ -0.89
SEC13-209ENST00000397117 PLAC8L1A1L4L8 177 aa9.46□□□□□ -0.89
SEC13-209ENST00000397117 LGALS9BQ3B8N2 356 aa9.46□□□□□ -0.89
SEC13-209ENST00000397117 KIAA1644Q3SXP7 199 aa9.46□□□□□ -0.89
SEC13-209ENST00000397117 RASL10AQ92737 203 aa9.46□□□□□ -0.89
SEC13-209ENST00000397117 NDUFAF3Q9BU61 184 aa9.46□□□□□ -0.89
SEC13-209ENST00000397117 KMT2AQ03164 3969 aa9.46□□□□□ -0.9
SEC13-209ENST00000397117 A0A087WWL8 130 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 A8MWV9 139 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 MGPP08493 103 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 FAM74A4Q5TZK3 123 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 HIST1H2BLQ99880 126 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 OVOL2Q9BRP0 275 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 JPT2Q9H910 190 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 DNAH10Q8IVF4 4471 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 IGHV4-28A0A0C4DH34 117 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 LY6G6CO95867 125 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 RAB4AP20338 218 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 MRPL51Q4U2R6 128 aaKnown RBP9.45□□□□□ -0.9
SEC13-209ENST00000397117 Q6ZTI0 123 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 OR10D4PQ8NGN7 298 aa9.45□□□□□ -0.9
SEC13-209ENST00000397117 CKS2P33552 79 aa9.44□□□□□ -0.9
SEC13-209ENST00000397117 RNF185Q96GF1 192 aa9.44□□□□□ -0.9
SEC13-209ENST00000397117 TRGV2A0A075B6R0 118 aa9.43□□□□□ -0.9
SEC13-209ENST00000397117 GAGE12BA1L429 117 aa9.43□□□□□ -0.9
SEC13-209ENST00000397117 F5H697 171 aa9.43□□□□□ -0.9
SEC13-209ENST00000397117 GAGE7O76087 117 aa9.43□□□□□ -0.9
SEC13-209ENST00000397117 GAGE12FP0CL80 117 aa9.43□□□□□ -0.9
SEC13-209ENST00000397117 GAGE12GP0CL81 117 aa9.43□□□□□ -0.9
SEC13-209ENST00000397117 GAGE12IP0CL82 117 aa9.43□□□□□ -0.9
SEC13-209ENST00000397117 SRIP30626 198 aa9.43□□□□□ -0.9
SEC13-209ENST00000397117 ORMDL3Q8N138 153 aa9.43□□□□□ -0.9
SEC13-209ENST00000397117 Q8NAQ8 132 aa9.43□□□□□ -0.9
SEC13-209ENST00000397117 SAMD10Q9BYL1 202 aa9.43□□□□□ -0.9
SEC13-209ENST00000397117 LYRM9A8MSI8 78 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 D6R8Y8 96 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 DEFB4AO15263 64 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 PPBPP02775 128 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 CRYGDP07320 174 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 ZNF56Q15929 161 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 CFAP126Q5VTH2 177 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 OR4C5Q8NGB2 326 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 KIF25-AS1Q9Y6Z4 181 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms