RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 APCSP02743 223 aa10.29□□□□□ -0.76
SEC13-208ENST00000397109 ATP5G1P05496 136 aa10.29□□□□□ -0.76
SEC13-208ENST00000397109 SMIM6P0DI80 62 aa10.29□□□□□ -0.76
SEC13-208ENST00000397109 ESDP10768 282 aa10.29□□□□□ -0.76
SEC13-208ENST00000397109 RNASE4P34096 147 aaKnown RBP10.29□□□□□ -0.76
SEC13-208ENST00000397109 DMRTA1Q5VZB9 504 aa10.29□□□□□ -0.76
SEC13-208ENST00000397109 C15orf53Q8NAA6 179 aa10.29□□□□□ -0.76
SEC13-208ENST00000397109 PACRGQ96M98 296 aaPredicted RBP10.29□□□□□ -0.76
SEC13-208ENST00000397109 RAB4BP61018 213 aa10.28□□□□□ -0.76
SEC13-208ENST00000397109 LINC01559Q495D7 138 aa10.28□□□□□ -0.76
SEC13-208ENST00000397109 POM121L12Q8N7R1 296 aa10.28□□□□□ -0.76
SEC13-208ENST00000397109 DNAH6Q9C0G6 4158 aa10.28□□□□□ -0.76
SEC13-208ENST00000397109 F2Z2F3 143 aa10.27□□□□□ -0.77
SEC13-208ENST00000397109 F5H768 121 aa10.27□□□□□ -0.77
SEC13-208ENST00000397109 SPINK4O60575 86 aa10.27□□□□□ -0.77
SEC13-208ENST00000397109 DAZ2Q13117 558 aaKnown RBP10.27□□□□□ -0.77
SEC13-208ENST00000397109 ANXA2RQ3ZCQ2 193 aa10.27□□□□□ -0.77
SEC13-208ENST00000397109 PRR9Q5T870 116 aa10.27□□□□□ -0.77
SEC13-208ENST00000397109 TMEM18Q96B42 140 aa10.27□□□□□ -0.77
SEC13-208ENST00000397109 PGLYRP4Q96LB8 373 aa10.27□□□□□ -0.77
SEC13-208ENST00000397109 LINC00612Q8N6U2 182 aa10.26□□□□□ -0.77
SEC13-208ENST00000397109 CNFNQ9BYD5 112 aa10.25□□□□□ -0.77
SEC13-208ENST00000397109 CAMPP49913 170 aa10.24□□□□□ -0.77
SEC13-208ENST00000397109 ZNF80P51504 273 aaPredicted RBP10.24□□□□□ -0.77
SEC13-208ENST00000397109 DNLZQ5SXM8 178 aa10.24□□□□□ -0.77
SEC13-208ENST00000397109 UBE2DNLQ8IWF7 75 aa10.24□□□□□ -0.77
SEC13-208ENST00000397109 IGHV1OR15-1A0A075B7D0 117 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 GAGE12BA1L429 117 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 IFITM10A6NMD0 228 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 GAGE7O76087 117 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 IGLC6P0CF74 106 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 GAGE12FP0CL80 117 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 GAGE12GP0CL81 117 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 GAGE12IP0CL82 117 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 CTRLP40313 264 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 C11orf72Q8NBR9 251 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 HIST1H2BLQ99880 126 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 GSN-AS1Q9NRJ2 163 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 TRAV21A0A0B4J279 112 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 ORM1P02763 201 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 SLAQ13239 276 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 FER1L6-AS1Q8NA97 138 aa10.23□□□□□ -0.77
SEC13-208ENST00000397109 GZMBP10144 247 aa10.22□□□□□ -0.77
SEC13-208ENST00000397109 FABP4P15090 132 aa10.22□□□□□ -0.77
SEC13-208ENST00000397109 SRIP30626 198 aa10.22□□□□□ -0.77
SEC13-208ENST00000397109 TDRG1Q3Y452 100 aa10.22□□□□□ -0.77
SEC13-208ENST00000397109 LYZL1Q6UWQ5 148 aa10.22□□□□□ -0.77
SEC13-208ENST00000397109 C12orf57Q99622 126 aa10.22□□□□□ -0.77
SEC13-208ENST00000397109 ALKBH7Q9BT30 221 aaPredicted RBP10.22□□□□□ -0.77
SEC13-208ENST00000397109 ARMS2P0C7Q2 107 aa10.21□□□□□ -0.78
SEC13-208ENST00000397109 Q6ZQT7 251 aa10.21□□□□□ -0.78
SEC13-208ENST00000397109 Q6ZTI0 123 aa10.21□□□□□ -0.78
SEC13-208ENST00000397109 OR10D4PQ8NGN7 298 aa10.21□□□□□ -0.78
SEC13-208ENST00000397109 C18orf15Q96N68 181 aa10.21□□□□□ -0.78
SEC13-208ENST00000397109 SSBP4Q9BWG4 385 aaPredicted RBP10.21□□□□□ -0.78
SEC13-208ENST00000397109 TRGV2A0A075B6R0 118 aa10.2□□□□□ -0.78
SEC13-208ENST00000397109 TRGV1A0A0A0MS02 117 aa10.2□□□□□ -0.78
SEC13-208ENST00000397109 NUDT3O95989 172 aa10.2□□□□□ -0.78
SEC13-208ENST00000397109 OR5AL1P0C617 328 aa10.2□□□□□ -0.78
SEC13-208ENST00000397109 MED14OSP0DP75 135 aa10.2□□□□□ -0.78
SEC13-208ENST00000397109 ZNF415Q09FC8 603 aa10.2□□□□□ -0.78
SEC13-208ENST00000397109 FAM159AQ6UWV7 190 aa10.2□□□□□ -0.78
SEC13-208ENST00000397109 ZNF575Q86XF7 245 aa10.2□□□□□ -0.78
SEC13-208ENST00000397109 TP53TG3Q9ULZ0 132 aa10.2□□□□□ -0.78
SEC13-208ENST00000397109 IGKV3D-20A0A0C4DH25 116 aa10.19□□□□□ -0.78
SEC13-208ENST00000397109 GRIFINA4D1Z8 144 aa10.19□□□□□ -0.78
SEC13-208ENST00000397109 CACNG7P62955 275 aa10.19□□□□□ -0.78
SEC13-208ENST00000397109 LGALS9BQ3B8N2 356 aa10.19□□□□□ -0.78
SEC13-208ENST00000397109 KIAA1644Q3SXP7 199 aa10.19□□□□□ -0.78
SEC13-208ENST00000397109 C18orf32Q8TCD1 76 aa10.19□□□□□ -0.78
SEC13-208ENST00000397109 MUC4Q99102 2169 aa10.19□□□□□ -0.78
SEC13-208ENST00000397109 EPPK1P58107 5090 aaKnown RBP10.18□□□□□ -0.78
SEC13-208ENST00000397109 TRGV11A0A075B6L2 103 aa10.18□□□□□ -0.78
SEC13-208ENST00000397109 H3BNG1 76 aa10.18□□□□□ -0.78
SEC13-208ENST00000397109 SNAI2O43623 268 aa10.18□□□□□ -0.78
SEC13-208ENST00000397109 PDZD11Q5EBL8 140 aa10.18□□□□□ -0.78
SEC13-208ENST00000397109 MUC21Q5SSG8 566 aa10.18□□□□□ -0.78
SEC13-208ENST00000397109 TMEM191AQ9H0A3 160 aa10.18□□□□□ -0.78
SEC13-208ENST00000397109 C11orf21Q9P2W6 132 aa10.18□□□□□ -0.78
SEC13-208ENST00000397109 DNAH10Q8IVF4 4471 aa10.18□□□□□ -0.78
SEC13-208ENST00000397109 TRAV26-1A0A087WT03 109 aa10.17□□□□□ -0.78
SEC13-208ENST00000397109 SERF1AO75920 110 aa10.17□□□□□ -0.78
SEC13-208ENST00000397109 CCL18P55774 89 aa10.17□□□□□ -0.78
SEC13-208ENST00000397109 JOSD1Q15040 202 aaPredicted RBP10.17□□□□□ -0.78
SEC13-208ENST00000397109 FAM104BQ5XKR9 115 aa10.17□□□□□ -0.78
SEC13-208ENST00000397109 KCNS1Q96KK3 526 aa10.17□□□□□ -0.78
SEC13-208ENST00000397109 SPXQ9BT56 116 aa10.17□□□□□ -0.78
SEC13-208ENST00000397109 NACAE9PAV3 2078 aa10.17□□□□□ -0.78
SEC13-208ENST00000397109 TMSB15BA0A087X1C1 80 aa10.17□□□□□ -0.78
SEC13-208ENST00000397109 PPBPP02775 128 aa10.17□□□□□ -0.78
SEC13-208ENST00000397109 RAB4AP20338 218 aa10.17□□□□□ -0.78
SEC13-208ENST00000397109 NTF3P20783 257 aa10.17□□□□□ -0.78
SEC13-208ENST00000397109 CHCHD1Q96BP2 118 aaKnown RBP10.17□□□□□ -0.78
SEC13-208ENST00000397109 TPPP3Q9BW30 176 aa10.17□□□□□ -0.78
SEC13-208ENST00000397109 PMCHP20382 165 aa10.16□□□□□ -0.78
SEC13-208ENST00000397109 S100A12P80511 92 aa10.16□□□□□ -0.78
SEC13-208ENST00000397109 TWIST1Q15672 202 aa10.16□□□□□ -0.78
SEC13-208ENST00000397109 PYY3Q5JQD4 70 aa10.16□□□□□ -0.78
SEC13-208ENST00000397109 SMIM15Q7Z3B0 74 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms