RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SPATA12Q7Z6I5 190 aa9.46□□□□□ -0.9
SEC13-204ENST00000397099 DAZAP1Q96EP5 407 aaKnown RBP9.46□□□□□ -0.9
SEC13-204ENST00000397099 SSBP4Q9BWG4 385 aaPredicted RBP9.46□□□□□ -0.9
SEC13-204ENST00000397099 PGPEP1Q9NXJ5 209 aa9.46□□□□□ -0.9
SEC13-204ENST00000397099 TMSB15BA0A087X1C1 80 aa9.45□□□□□ -0.9
SEC13-204ENST00000397099 XKRY2A2RUG3 117 aa9.45□□□□□ -0.9
SEC13-204ENST00000397099 M0R381 172 aa9.45□□□□□ -0.9
SEC13-204ENST00000397099 SNAI2O43623 268 aa9.45□□□□□ -0.9
SEC13-204ENST00000397099 CDK2AP2O75956 126 aa9.45□□□□□ -0.9
SEC13-204ENST00000397099 RPS20P60866 119 aaKnown RBP9.45□□□□□ -0.9
SEC13-204ENST00000397099 CCL20P78556 96 aa9.45□□□□□ -0.9
SEC13-204ENST00000397099 FAM74A4Q5TZK3 123 aa9.45□□□□□ -0.9
SEC13-204ENST00000397099 CDPF1Q6NVV7 123 aa9.45□□□□□ -0.9
SEC13-204ENST00000397099 VAX2Q9UIW0 290 aa9.45□□□□□ -0.9
SEC13-204ENST00000397099 IBA57-AS1B1ANH7 110 aa9.44□□□□□ -0.9
SEC13-204ENST00000397099 LINC00694P0DN24 101 aa9.44□□□□□ -0.9
SEC13-204ENST00000397099 BCL2P10415 239 aa9.44□□□□□ -0.9
SEC13-204ENST00000397099 GNG4P50150 75 aa9.44□□□□□ -0.9
SEC13-204ENST00000397099 RAB4BP61018 213 aa9.44□□□□□ -0.9
SEC13-204ENST00000397099 LAGE3Q14657 143 aa9.44□□□□□ -0.9
SEC13-204ENST00000397099 PRR27Q6MZM9 219 aa9.44□□□□□ -0.9
SEC13-204ENST00000397099 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.44□□□□□ -0.9
SEC13-204ENST00000397099 LRP1BQ9NZR2 4599 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 GAGE12JA6NER3 117 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 BLOC1S1P78537 153 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 RPL36AP83881 106 aaKnown RBP9.43□□□□□ -0.9
SEC13-204ENST00000397099 GAGE1Q13065 139 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 GAGE4Q13068 117 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 GAGE5Q13069 117 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 GAGE13Q4V321 117 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 CENPWQ5EE01 88 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 TOR2AQ5JU69 321 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 SPANXN1Q5VSR9 72 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 Q6ZSN1 163 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 RPL36ALQ969Q0 106 aaKnown RBP9.43□□□□□ -0.9
SEC13-204ENST00000397099 SAMD10Q9BYL1 202 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 JPT2Q9H910 190 aa9.43□□□□□ -0.9
SEC13-204ENST00000397099 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
SEC13-204ENST00000397099 A0A087WWL8 130 aa9.42□□□□□ -0.9
SEC13-204ENST00000397099 SMIM17P0DL12 118 aa9.42□□□□□ -0.9
SEC13-204ENST00000397099 C9orf62Q8N4C0 152 aa9.42□□□□□ -0.9
SEC13-204ENST00000397099 TM2D2Q9BX73 214 aa9.42□□□□□ -0.9
SEC13-204ENST00000397099 MED9Q9NWA0 146 aa9.42□□□□□ -0.9
SEC13-204ENST00000397099 PCLOQ9Y6V0 5065 aa9.41□□□□□ -0.9
SEC13-204ENST00000397099 F2Z2F3 143 aa9.41□□□□□ -0.9
SEC13-204ENST00000397099 PSCAO43653 123 aa9.41□□□□□ -0.9
SEC13-204ENST00000397099 C14orf178Q8N769 122 aaPredicted RBP9.41□□□□□ -0.9
SEC13-204ENST00000397099 MAPKAPK5-AS1Q8N8E1 139 aa9.41□□□□□ -0.9
SEC13-204ENST00000397099 OR10G8Q8NGN5 311 aa9.41□□□□□ -0.9
SEC13-204ENST00000397099 AP1S3Q96PC3 154 aa9.41□□□□□ -0.9
SEC13-204ENST00000397099 CHCHD7Q9BUK0 85 aa9.41□□□□□ -0.9
SEC13-204ENST00000397099 DERL1Q9BUN8 251 aa9.41□□□□□ -0.9
SEC13-204ENST00000397099 URGCP-MRPS24S4R325 110 aa9.41□□□□□ -0.9
SEC13-204ENST00000397099 RYR1P21817 5038 aa9.4□□□□□ -0.9
SEC13-204ENST00000397099 A0A087WTM6 91 aa9.4□□□□□ -0.9
SEC13-204ENST00000397099 TRAV8-3A0A0A6YYJ7 113 aa9.4□□□□□ -0.9
SEC13-204ENST00000397099 P01737 135 aa9.4□□□□□ -0.9
SEC13-204ENST00000397099 CACNG7P62955 275 aa9.4□□□□□ -0.9
SEC13-204ENST00000397099 RPL19P84098 196 aaKnown RBP9.4□□□□□ -0.9
SEC13-204ENST00000397099 OR10AG1Q8NH19 301 aa9.4□□□□□ -0.9
SEC13-204ENST00000397099 COX11Q9Y6N1 276 aa9.4□□□□□ -0.9
SEC13-204ENST00000397099 DNAH5Q8TE73 4624 aa9.39□□□□□ -0.91
SEC13-204ENST00000397099 C19orf71A6NCJ1 209 aa9.39□□□□□ -0.91
SEC13-204ENST00000397099 KRTAP10-2P60368 255 aa9.39□□□□□ -0.91
SEC13-204ENST00000397099 PKIAP61925 76 aa9.39□□□□□ -0.91
SEC13-204ENST00000397099 ELOBQ15370 118 aa9.39□□□□□ -0.91
SEC13-204ENST00000397099 ZNF56Q15929 161 aa9.39□□□□□ -0.91
SEC13-204ENST00000397099 TMEM97Q5BJF2 176 aa9.39□□□□□ -0.91
SEC13-204ENST00000397099 KCNIP4Q6PIL6 250 aa9.39□□□□□ -0.91
SEC13-204ENST00000397099 FER1L6-AS1Q8NA97 138 aa9.39□□□□□ -0.91
SEC13-204ENST00000397099 KRTAP4-5Q9BYR2 181 aa9.39□□□□□ -0.91
SEC13-204ENST00000397099 HSPG2P98160 4391 aa9.38□□□□□ -0.91
SEC13-204ENST00000397099 hCG_2014768A0A024R1R8 64 aa9.38□□□□□ -0.91
SEC13-204ENST00000397099 TMEM250H0YL14 139 aa9.38□□□□□ -0.91
SEC13-204ENST00000397099 NDUFS6O75380 124 aaKnown RBP9.38□□□□□ -0.91
SEC13-204ENST00000397099 IGLV2-8P01709 118 aa9.38□□□□□ -0.91
SEC13-204ENST00000397099 WDR73Q6P4I2 378 aa9.38□□□□□ -0.91
SEC13-204ENST00000397099 OR2D3Q8NGH3 330 aa9.38□□□□□ -0.91
SEC13-204ENST00000397099 TNFRSF18Q9Y5U5 241 aa9.38□□□□□ -0.91
SEC13-204ENST00000397099 RAB19A4D1S5 217 aa9.37□□□□□ -0.91
SEC13-204ENST00000397099 H7C1H1 209 aa9.37□□□□□ -0.91
SEC13-204ENST00000397099 IGHV3-30P01768 117 aa9.37□□□□□ -0.91
SEC13-204ENST00000397099 IGHV3-33P01772 117 aa9.37□□□□□ -0.91
SEC13-204ENST00000397099 IGHV3-30-3P0DP02 117 aa9.37□□□□□ -0.91
SEC13-204ENST00000397099 IGHV3-30-5P0DP03 117 aa9.37□□□□□ -0.91
SEC13-204ENST00000397099 UBE2D3P61077 147 aa9.37□□□□□ -0.91
SEC13-204ENST00000397099 UBE2D2P62837 147 aa9.37□□□□□ -0.91
SEC13-204ENST00000397099 LYPD6BQ8NI32 183 aa9.37□□□□□ -0.91
SEC13-204ENST00000397099 NTN5Q8WTR8 489 aaPredicted RBP9.37□□□□□ -0.91
SEC13-204ENST00000397099 RMI2Q96E14 147 aa9.37□□□□□ -0.91
SEC13-204ENST00000397099 A0A087WX48 190 aa9.36□□□□□ -0.91
SEC13-204ENST00000397099 F5H697 171 aa9.36□□□□□ -0.91
SEC13-204ENST00000397099 TRGC1P0CF51 173 aa9.36□□□□□ -0.91
SEC13-204ENST00000397099 IGLC6P0CF74 106 aa9.36□□□□□ -0.91
SEC13-204ENST00000397099 ALKAL2Q6UX46 152 aa9.36□□□□□ -0.91
SEC13-204ENST00000397099 DAZ4Q86SG3 579 aaKnown RBP9.36□□□□□ -0.91
SEC13-204ENST00000397099 DAZ3Q9NR90 486 aaKnown RBP9.36□□□□□ -0.91
SEC13-204ENST00000397099 RBFOX3A6NFN3 312 aa9.35□□□□□ -0.91
SEC13-204ENST00000397099 NIT1Q86X76 327 aa9.35□□□□□ -0.91
SEC13-204ENST00000397099 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms