RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 LYZL1Q6UWQ5 148 aa7.29□□□□□ -1.24
NEDD8-202ENST00000396828 TIMM8BQ9Y5J9 83 aaPredicted RBP7.29□□□□□ -1.24
NEDD8-202ENST00000396828 TRBV24-1A0A075B6N3 115 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 TGIF2-C20orf24A0A0A6YYL0 155 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 IGHV3-16A0A0C4DH30 117 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 A0A1B0GUT8 65 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 SMIM9A6NGZ8 99 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 H3BVH4 76 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 SPINK4O60575 86 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 ARMS2P0C7Q2 107 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 CACNG7P62955 275 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 RIGQ13278 110 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 RRN3P1Q2M238 152 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 ZNF493Q6ZR52 646 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 ATP5L2Q7Z4Y8 100 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 FAM210BQ96KR6 192 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 SSBP4Q9BWG4 385 aaPredicted RBP7.28□□□□□ -1.24
NEDD8-202ENST00000396828 TP53TG3Q9ULZ0 132 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 PHLDA3Q9Y5J5 127 aa7.28□□□□□ -1.24
NEDD8-202ENST00000396828 A0A1B0GW15 77 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 A6NJY4 79 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 SNAI2O43623 268 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 S100A8P05109 93 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 SMCPP49901 116 aaPredicted RBP7.27□□□□□ -1.25
NEDD8-202ENST00000396828 COX19Q49B96 90 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 SPANXN1Q5VSR9 72 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 WDR73Q6P4I2 378 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 RASL11AQ6T310 242 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 ZNF575Q86XF7 245 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 LINC00528Q8N1L1 170 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 SYT8Q8NBV8 401 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 TMEM263Q8WUH6 116 aaKnown RBP7.27□□□□□ -1.25
NEDD8-202ENST00000396828 C16orf74Q96GX8 76 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 YPEL4Q96NS1 127 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 MDFICQ9P1T7 246 aa7.27□□□□□ -1.25
NEDD8-202ENST00000396828 DNAH5Q8TE73 4624 aa7.26□□□□□ -1.25
NEDD8-202ENST00000396828 COLCA2A8K830 154 aa7.26□□□□□ -1.25
NEDD8-202ENST00000396828 SNURFLB1AK76 121 aa7.26□□□□□ -1.25
NEDD8-202ENST00000396828 RNASE3P12724 160 aaKnown RBP7.26□□□□□ -1.25
NEDD8-202ENST00000396828 SSTP61278 116 aa7.26□□□□□ -1.25
NEDD8-202ENST00000396828 HBBP68871 147 aa7.26□□□□□ -1.25
NEDD8-202ENST00000396828 TWIST1Q15672 202 aa7.26□□□□□ -1.25
NEDD8-202ENST00000396828 MRPL54Q6P161 138 aaKnown RBP7.26□□□□□ -1.25
NEDD8-202ENST00000396828 UBE2DNLQ8IWF7 75 aa7.26□□□□□ -1.25
NEDD8-202ENST00000396828 ZFP82Q8N141 532 aa7.26□□□□□ -1.25
NEDD8-202ENST00000396828 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.26□□□□□ -1.25
NEDD8-202ENST00000396828 C9orf85Q96MD7 179 aa7.26□□□□□ -1.25
NEDD8-202ENST00000396828 SPXQ9BT56 116 aa7.26□□□□□ -1.25
NEDD8-202ENST00000396828 CNFNQ9BYD5 112 aa7.26□□□□□ -1.25
NEDD8-202ENST00000396828 SCRT2Q9NQ03 307 aa7.26□□□□□ -1.25
NEDD8-202ENST00000396828 M0R381 172 aa7.25□□□□□ -1.25
NEDD8-202ENST00000396828 RAB5AP20339 215 aa7.25□□□□□ -1.25
NEDD8-202ENST00000396828 NTF3P20783 257 aa7.25□□□□□ -1.25
NEDD8-202ENST00000396828 CAMPP49913 170 aa7.25□□□□□ -1.25
NEDD8-202ENST00000396828 RAB4BP61018 213 aa7.25□□□□□ -1.25
NEDD8-202ENST00000396828 SMIM15Q7Z3B0 74 aa7.25□□□□□ -1.25
NEDD8-202ENST00000396828 OR10AG1Q8NH19 301 aa7.25□□□□□ -1.25
NEDD8-202ENST00000396828 RNASE8Q8TDE3 154 aaKnown RBP7.25□□□□□ -1.25
NEDD8-202ENST00000396828 GSN-AS1Q9NRJ2 163 aa7.25□□□□□ -1.25
NEDD8-202ENST00000396828 MUC21A0A0G2JKD1 596 aa7.24□□□□□ -1.25
NEDD8-202ENST00000396828 MUC21A0A140T8X8 626 aa7.24□□□□□ -1.25
NEDD8-202ENST00000396828 M0R2P5 195 aa7.24□□□□□ -1.25
NEDD8-202ENST00000396828 TRGC1P0CF51 173 aa7.24□□□□□ -1.25
NEDD8-202ENST00000396828 AZU1P20160 251 aa7.24□□□□□ -1.25
NEDD8-202ENST00000396828 RPS10P46783 165 aaKnown RBP7.24□□□□□ -1.25
NEDD8-202ENST00000396828 C11orf72Q8NBR9 251 aa7.24□□□□□ -1.25
NEDD8-202ENST00000396828 A0A1B0GXF2 115 aa7.23□□□□□ -1.25
NEDD8-202ENST00000396828 PLAC8L1A1L4L8 177 aa7.23□□□□□ -1.25
NEDD8-202ENST00000396828 MT-ND6P03923 174 aa7.23□□□□□ -1.25
NEDD8-202ENST00000396828 DAD1P61803 113 aa7.23□□□□□ -1.25
NEDD8-202ENST00000396828 DAZ2Q13117 558 aaKnown RBP7.23□□□□□ -1.25
NEDD8-202ENST00000396828 ZNF876PQ49A33 203 aa7.23□□□□□ -1.25
NEDD8-202ENST00000396828 PIK3CD-AS1Q5SR53 167 aa7.23□□□□□ -1.25
NEDD8-202ENST00000396828 PTH2Q96A98 100 aa7.23□□□□□ -1.25
NEDD8-202ENST00000396828 AP1S3Q96PC3 154 aa7.23□□□□□ -1.25
NEDD8-202ENST00000396828 GNB1LQ9BYB4 327 aa7.23□□□□□ -1.25
NEDD8-202ENST00000396828 NXPH4O95158 308 aa7.22□□□□□ -1.25
NEDD8-202ENST00000396828 HLA-DQA1P01909 254 aa7.22□□□□□ -1.25
NEDD8-202ENST00000396828 SMIM17P0DL12 118 aa7.22□□□□□ -1.25
NEDD8-202ENST00000396828 TNP2Q05952 138 aa7.22□□□□□ -1.25
NEDD8-202ENST00000396828 C1orf134Q5TEV5 83 aa7.22□□□□□ -1.25
NEDD8-202ENST00000396828 FRZBQ92765 325 aa7.22□□□□□ -1.25
NEDD8-202ENST00000396828 TRAPPC1Q9Y5R8 145 aa7.22□□□□□ -1.25
NEDD8-202ENST00000396828 TEX48A0A1B0GUV7 120 aa7.21□□□□□ -1.26
NEDD8-202ENST00000396828 DEFB130BP0DP73 79 aa7.21□□□□□ -1.26
NEDD8-202ENST00000396828 DEFB130AP0DP74 79 aa7.21□□□□□ -1.26
NEDD8-202ENST00000396828 TMEM136Q6ZRR5 245 aa7.21□□□□□ -1.26
NEDD8-202ENST00000396828 GATD1Q8NB37 220 aa7.21□□□□□ -1.26
NEDD8-202ENST00000396828 TMEM191AQ9H0A3 160 aa7.21□□□□□ -1.26
NEDD8-202ENST00000396828 NOP10Q9NPE3 64 aaKnown RBP7.21□□□□□ -1.26
NEDD8-202ENST00000396828 MSRB1Q9NZV6 116 aa7.21□□□□□ -1.26
NEDD8-202ENST00000396828 TRGV1A0A0A0MS02 117 aa7.2□□□□□ -1.26
NEDD8-202ENST00000396828 A8MWV9 139 aa7.2□□□□□ -1.26
NEDD8-202ENST00000396828 APCSP02743 223 aa7.2□□□□□ -1.26
NEDD8-202ENST00000396828 ZNRF2Q8NHG8 242 aa7.2□□□□□ -1.26
NEDD8-202ENST00000396828 RASL10AQ92737 203 aa7.2□□□□□ -1.26
NEDD8-202ENST00000396828 MRPL18Q9H0U6 180 aaKnown RBP7.2□□□□□ -1.26
NEDD8-202ENST00000396828 DPH3P1Q9H4G8 78 aa7.2□□□□□ -1.26
NEDD8-202ENST00000396828 MRPL16Q9NX20 251 aaKnown RBP7.2□□□□□ -1.26
NEDD8-202ENST00000396828 LYRM9A8MSI8 78 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms