RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 C11orf1Q9H5F2 150 aa13.37□□□□□ -0.27
UBFD1-201ENST00000395878 MRPL36Q9P0J6 103 aaKnown RBP13.37□□□□□ -0.27
UBFD1-201ENST00000395878 A4D1N5 150 aa13.36□□□□□ -0.27
UBFD1-201ENST00000395878 TOMM6Q96B49 74 aa13.36□□□□□ -0.27
UBFD1-201ENST00000395878 TIMM17AQ99595 171 aa13.36□□□□□ -0.27
UBFD1-201ENST00000395878 A0A1W2PNU3 283 aaPredicted RBP13.36□□□□□ -0.27
UBFD1-201ENST00000395878 IGHG2P01859 326 aa13.36□□□□□ -0.27
UBFD1-201ENST00000395878 NCKAP5O14513 1909 aa13.36□□□□□ -0.27
UBFD1-201ENST00000395878 hADV29S1A0JD25 119 aa13.36□□□□□ -0.27
UBFD1-201ENST00000395878 E7EUB6 86 aa13.36□□□□□ -0.27
UBFD1-201ENST00000395878 COX7B2Q8TF08 81 aa13.36□□□□□ -0.27
UBFD1-201ENST00000395878 CAMK2N2Q96S95 79 aa13.36□□□□□ -0.27
UBFD1-201ENST00000395878 ZNF503Q96F45 646 aa13.35□□□□□ -0.27
UBFD1-201ENST00000395878 CITED1Q99966 193 aa13.35□□□□□ -0.27
UBFD1-201ENST00000395878 Q9HAA7 133 aa13.35□□□□□ -0.27
UBFD1-201ENST00000395878 FBXL19-AS1Q494R0 122 aa13.35□□□□□ -0.27
UBFD1-201ENST00000395878 TDRG1Q3Y452 100 aa13.35□□□□□ -0.27
UBFD1-201ENST00000395878 SIRPDQ9H106 197 aa13.35□□□□□ -0.27
UBFD1-201ENST00000395878 TRBV7-3A0A075B6L6 115 aa13.34□□□□□ -0.27
UBFD1-201ENST00000395878 HIST2H2BCQ6DN03 193 aa13.34□□□□□ -0.27
UBFD1-201ENST00000395878 BAALCQ8WXS3 180 aa13.34□□□□□ -0.27
UBFD1-201ENST00000395878 SPANXCQ9NY87 97 aa13.34□□□□□ -0.27
UBFD1-201ENST00000395878 RPL39P62891 51 aaKnown RBP13.34□□□□□ -0.27
UBFD1-201ENST00000395878 FAM208BQ5VWN6 2430 aa13.34□□□□□ -0.27
UBFD1-201ENST00000395878 MSMPQ1L6U9 139 aa13.33□□□□□ -0.27
UBFD1-201ENST00000395878 ETDCA0A1B0GVM5 59 aa13.33□□□□□ -0.28
UBFD1-201ENST00000395878 E9PLD3 99 aa13.33□□□□□ -0.28
UBFD1-201ENST00000395878 C19orf71A6NCJ1 209 aa13.32□□□□□ -0.28
UBFD1-201ENST00000395878 ZFHX2Q9C0A1 2572 aaPredicted RBP13.32□□□□□ -0.28
UBFD1-201ENST00000395878 P0C879 139 aa13.32□□□□□ -0.28
UBFD1-201ENST00000395878 IGLV10-54A0A075B6I4 117 aa13.31□□□□□ -0.28
UBFD1-201ENST00000395878 DEFB105AQ8NG35 78 aa13.31□□□□□ -0.28
UBFD1-201ENST00000395878 FANCD2OSQ96PS1 177 aa13.31□□□□□ -0.28
UBFD1-201ENST00000395878 FUSP35637 526 aaKnown RBP eCLIP13.31□□□□□ -0.28
UBFD1-201ENST00000395878 FXYD2P54710 66 aa13.31□□□□□ -0.28
UBFD1-201ENST00000395878 MRAPQ8TCY5 172 aa13.31□□□□□ -0.28
UBFD1-201ENST00000395878 RPL18AQ02543 176 aaKnown RBP13.31□□□□□ -0.28
UBFD1-201ENST00000395878 C11orf86A6NJI1 115 aa13.31□□□□□ -0.28
UBFD1-201ENST00000395878 MYCNOSP40205 109 aa13.31□□□□□ -0.28
UBFD1-201ENST00000395878 OPRPNQ99935 248 aaPredicted RBP13.31□□□□□ -0.28
UBFD1-201ENST00000395878 DYSFO75923 2080 aa13.31□□□□□ -0.28
UBFD1-201ENST00000395878 C4orf3Q8WVX3 66 aa13.3□□□□□ -0.28
UBFD1-201ENST00000395878 LINC01620Q4KN68 170 aa13.3□□□□□ -0.28
UBFD1-201ENST00000395878 CCL18P55774 89 aa13.3□□□□□ -0.28
UBFD1-201ENST00000395878 H3BQ85 93 aa13.29□□□□□ -0.28
UBFD1-201ENST00000395878 COL4A3Q01955 1670 aa13.29□□□□□ -0.28
UBFD1-201ENST00000395878 RS1O15537 224 aa13.29□□□□□ -0.28
UBFD1-201ENST00000395878 VSIG2Q96IQ7 327 aa13.29□□□□□ -0.28
UBFD1-201ENST00000395878 TEN1Q86WV5 123 aa13.29□□□□□ -0.28
UBFD1-201ENST00000395878 RNASE8Q8TDE3 154 aaKnown RBP13.29□□□□□ -0.28
UBFD1-201ENST00000395878 LINC00574Q9H8X3 128 aa13.29□□□□□ -0.28
UBFD1-201ENST00000395878 HHLA3Q9XRX5 114 aa13.29□□□□□ -0.28
UBFD1-201ENST00000395878 CHD3Q12873 2000 aaKnown RBP13.28□□□□□ -0.28
UBFD1-201ENST00000395878 IGKV1D-37A0A075B6S9 117 aa13.28□□□□□ -0.28
UBFD1-201ENST00000395878 IGHV3-30P01768 117 aa13.28□□□□□ -0.28
UBFD1-201ENST00000395878 IGHV3-33P01772 117 aa13.28□□□□□ -0.28
UBFD1-201ENST00000395878 IGHV3-30-3P0DP02 117 aa13.28□□□□□ -0.28
UBFD1-201ENST00000395878 IGHV3-30-5P0DP03 117 aa13.28□□□□□ -0.28
UBFD1-201ENST00000395878 ODF1Q14990 250 aa13.28□□□□□ -0.28
UBFD1-201ENST00000395878 A6NDX4 124 aa13.28□□□□□ -0.28
UBFD1-201ENST00000395878 NRGNQ92686 78 aa13.28□□□□□ -0.28
UBFD1-201ENST00000395878 TTTY13Q9BZ97 58 aa13.28□□□□□ -0.28
UBFD1-201ENST00000395878 A0A0J9YX75 114 aa13.27□□□□□ -0.28
UBFD1-201ENST00000395878 CXCL5P42830 114 aa13.27□□□□□ -0.28
UBFD1-201ENST00000395878 PRB1P04280 392 aa13.27□□□□□ -0.29
UBFD1-201ENST00000395878 IGHV4-4A0A075B6R2 117 aa13.27□□□□□ -0.29
UBFD1-201ENST00000395878 UNQ9165/PRO28630Q6UXU0 137 aa13.27□□□□□ -0.29
UBFD1-201ENST00000395878 PTPRQQ9UMZ3 2332 aa13.27□□□□□ -0.29
UBFD1-201ENST00000395878 KIF26AQ9ULI4 1882 aaPredicted RBP13.26□□□□□ -0.29
UBFD1-201ENST00000395878 NDUFA1O15239 70 aa13.26□□□□□ -0.29
UBFD1-201ENST00000395878 FRMD6-AS1P0C7T7 363 aa13.26□□□□□ -0.29
UBFD1-201ENST00000395878 A0A0B4J2C4 111 aa13.26□□□□□ -0.29
UBFD1-201ENST00000395878 C20orf203Q8NBC4 194 aa13.26□□□□□ -0.29
UBFD1-201ENST00000395878 TIRAPP58753 221 aa13.25□□□□□ -0.29
UBFD1-201ENST00000395878 DEFB1P60022 68 aa13.25□□□□□ -0.29
UBFD1-201ENST00000395878 TAX1BP3O14907 124 aa13.25□□□□□ -0.29
UBFD1-201ENST00000395878 WISP2O76076 250 aa13.25□□□□□ -0.29
UBFD1-201ENST00000395878 Q8NA96 180 aa13.25□□□□□ -0.29
UBFD1-201ENST00000395878 DAND5Q8N907 189 aa13.24□□□□□ -0.29
UBFD1-201ENST00000395878 TNRC6AQ8NDV7 1962 aaKnown RBP13.24□□□□□ -0.29
UBFD1-201ENST00000395878 ODF3BA8MYP8 253 aa13.24□□□□□ -0.29
UBFD1-201ENST00000395878 A0A1B0GXF2 115 aa13.24□□□□□ -0.29
UBFD1-201ENST00000395878 TRBV12-3P01733 135 aa13.24□□□□□ -0.29
UBFD1-201ENST00000395878 TMEM258P61165 79 aa13.24□□□□□ -0.29
UBFD1-201ENST00000395878 IGHV1-58A0A0C4DH39 117 aa13.24□□□□□ -0.29
UBFD1-201ENST00000395878 RBM3P98179 157 aaKnown RBP13.24□□□□□ -0.29
UBFD1-201ENST00000395878 TMEM61Q8N0U2 210 aa13.24□□□□□ -0.29
UBFD1-201ENST00000395878 MDFICQ9P1T7 246 aa13.24□□□□□ -0.29
UBFD1-201ENST00000395878 NDUFS5O43920 106 aa13.23□□□□□ -0.29
UBFD1-201ENST00000395878 TMEM263Q8WUH6 116 aaKnown RBP13.23□□□□□ -0.29
UBFD1-201ENST00000395878 ESM1Q9NQ30 184 aa13.23□□□□□ -0.29
UBFD1-201ENST00000395878 MUC6Q6W4X9 2439 aa13.23□□□□□ -0.29
UBFD1-201ENST00000395878 NACAE9PAV3 2078 aa13.23□□□□□ -0.29
UBFD1-201ENST00000395878 TRBV10-1A0A0K0K1A3 114 aa13.23□□□□□ -0.29
UBFD1-201ENST00000395878 CLPSL1A2RUU4 121 aa13.22□□□□□ -0.29
UBFD1-201ENST00000395878 PROP1O75360 226 aa13.22□□□□□ -0.29
UBFD1-201ENST00000395878 SPATA12Q7Z6I5 190 aa13.22□□□□□ -0.29
UBFD1-201ENST00000395878 CCDC140Q96MF4 163 aa13.22□□□□□ -0.29
UBFD1-201ENST00000395878 TTC28Q96AY4 2481 aa13.22□□□□□ -0.29
UBFD1-201ENST00000395878 TNFRSF13BO14836 293 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms