RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ZNF580Q9UK33 172 aa10.81□□□□□ -0.68
CLIP2-203ENST00000395060 C9JAW5 83 aa10.8□□□□□ -0.68
CLIP2-203ENST00000395060 CFC1BP0CG36 223 aa10.8□□□□□ -0.68
CLIP2-203ENST00000395060 CFC1P0CG37 223 aa10.8□□□□□ -0.68
CLIP2-203ENST00000395060 NACAE9PAV3 2078 aa10.8□□□□□ -0.68
CLIP2-203ENST00000395060 RNF223E7ERA6 249 aa10.8□□□□□ -0.68
CLIP2-203ENST00000395060 IGHV4-39P01824 125 aa10.8□□□□□ -0.68
CLIP2-203ENST00000395060 HTN1P15515 57 aa10.8□□□□□ -0.68
CLIP2-203ENST00000395060 SS18L2Q9UHA2 77 aa10.8□□□□□ -0.68
CLIP2-203ENST00000395060 TRAV21A0A0B4J279 112 aa10.8□□□□□ -0.68
CLIP2-203ENST00000395060 A0A0J9YY99 117 aa10.8□□□□□ -0.68
CLIP2-203ENST00000395060 CD7P09564 240 aa10.79□□□□□ -0.68
CLIP2-203ENST00000395060 TRAV12-3A0A0B4J271 114 aa10.79□□□□□ -0.68
CLIP2-203ENST00000395060 A0A1W2PPR1 153 aa10.79□□□□□ -0.68
CLIP2-203ENST00000395060 A8MWV9 139 aa10.79□□□□□ -0.68
CLIP2-203ENST00000395060 UBE2D1P51668 147 aa10.79□□□□□ -0.68
CLIP2-203ENST00000395060 ZNRF2Q8NHG8 242 aa10.79□□□□□ -0.68
CLIP2-203ENST00000395060 TMEM190Q8WZ59 177 aa10.79□□□□□ -0.68
CLIP2-203ENST00000395060 IGLV4-69A0A075B6H9 119 aa10.78□□□□□ -0.68
CLIP2-203ENST00000395060 TRAV12-2A0A075B6T6 113 aa10.78□□□□□ -0.68
CLIP2-203ENST00000395060 RNASE3P12724 160 aaKnown RBP10.78□□□□□ -0.68
CLIP2-203ENST00000395060 COX6B1P14854 86 aa10.78□□□□□ -0.68
CLIP2-203ENST00000395060 CELSR2Q9HCU4 2923 aa10.78□□□□□ -0.68
CLIP2-203ENST00000395060 TRBV20-1A0A075B6N2 111 aa10.78□□□□□ -0.68
CLIP2-203ENST00000395060 RNASE13Q5GAN3 156 aaKnown RBP10.78□□□□□ -0.68
CLIP2-203ENST00000395060 GPHB5Q86YW7 130 aa10.78□□□□□ -0.68
CLIP2-203ENST00000395060 A4D1N5 150 aa10.77□□□□□ -0.69
CLIP2-203ENST00000395060 HERVK_113P61574 105 aa10.77□□□□□ -0.69
CLIP2-203ENST00000395060 TEN1Q86WV5 123 aa10.77□□□□□ -0.69
CLIP2-203ENST00000395060 PPDPFLQ8WWR9 84 aa10.77□□□□□ -0.69
CLIP2-203ENST00000395060 ANAPC13Q9BS18 74 aa10.77□□□□□ -0.69
CLIP2-203ENST00000395060 FLNCQ14315 2725 aa10.77□□□□□ -0.69
CLIP2-203ENST00000395060 ACACBO00763 2458 aa10.77□□□□□ -0.69
CLIP2-203ENST00000395060 SDHAF1A6NFY7 115 aa10.76□□□□□ -0.69
CLIP2-203ENST00000395060 ELANEP08246 267 aa10.76□□□□□ -0.69
CLIP2-203ENST00000395060 LGALS3P17931 250 aaKnown RBP10.76□□□□□ -0.69
CLIP2-203ENST00000395060 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
CLIP2-203ENST00000395060 CFAP46Q8IYW2 2715 aa10.76□□□□□ -0.69
CLIP2-203ENST00000395060 IGHV3-73A0A0B4J1V6 119 aa10.76□□□□□ -0.69
CLIP2-203ENST00000395060 PRSS2P07478 247 aa10.76□□□□□ -0.69
CLIP2-203ENST00000395060 ZNF56Q15929 161 aa10.76□□□□□ -0.69
CLIP2-203ENST00000395060 TCTEX1D4Q5JR98 221 aa10.76□□□□□ -0.69
CLIP2-203ENST00000395060 MYO18BQ8IUG5 2567 aa10.76□□□□□ -0.69
CLIP2-203ENST00000395060 PF4V1P10720 104 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 IGHV4-4A0A075B6R2 117 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 TRAV41A0A0B4J266 112 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 UTP20O75691 2785 aaKnown RBP10.75□□□□□ -0.69
CLIP2-203ENST00000395060 UCNP55089 124 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 J3QQQ9 107 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 IGHV3-30P01768 117 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 IGHV3-30-5P0DP03 117 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 UBE2D3P61077 147 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 UBE2D2P62837 147 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 PMVKQ15126 192 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 FAM159AQ6UWV7 190 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 C9orf139Q6ZV77 190 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 BPESC1Q9GZL8 116 aa10.75□□□□□ -0.69
CLIP2-203ENST00000395060 CENPVL3A0A0U1RRI6 287 aa10.74□□□□□ -0.69
CLIP2-203ENST00000395060 B5MCH6 92 aa10.74□□□□□ -0.69
CLIP2-203ENST00000395060 FBXL19-AS1Q494R0 122 aa10.74□□□□□ -0.69
CLIP2-203ENST00000395060 PRO1854Q9UHT4 67 aa10.74□□□□□ -0.69
CLIP2-203ENST00000395060 TRBV7-1A0A0A6YYK4 115 aa10.74□□□□□ -0.69
CLIP2-203ENST00000395060 SLC25A20O43772 301 aa10.74□□□□□ -0.69
CLIP2-203ENST00000395060 EBI3Q14213 229 aa10.74□□□□□ -0.69
CLIP2-203ENST00000395060 MINOS1Q5TGZ0 78 aa10.74□□□□□ -0.69
CLIP2-203ENST00000395060 C10orf126Q8N4M7 172 aa10.74□□□□□ -0.69
CLIP2-203ENST00000395060 SIRPDQ9H106 197 aa10.74□□□□□ -0.69
CLIP2-203ENST00000395060 KLK9Q9UKQ9 250 aa10.74□□□□□ -0.69
CLIP2-203ENST00000395060 MINOS1-NBL1R4GNA1 71 aa10.74□□□□□ -0.69
CLIP2-203ENST00000395060 ZNF688P0C7X2 276 aa10.73□□□□□ -0.69
CLIP2-203ENST00000395060 Q6ZSV7 163 aa10.73□□□□□ -0.69
CLIP2-203ENST00000395060 NTN5Q8WTR8 489 aaPredicted RBP10.73□□□□□ -0.69
CLIP2-203ENST00000395060 ITLN2Q8WWU7 325 aaPredicted RBP10.73□□□□□ -0.69
CLIP2-203ENST00000395060 AJUBAQ96IF1 538 aa10.73□□□□□ -0.69
CLIP2-203ENST00000395060 FAM208BQ5VWN6 2430 aa10.73□□□□□ -0.69
CLIP2-203ENST00000395060 CEMP1Q6PRD7 247 aaPredicted RBP10.73□□□□□ -0.69
CLIP2-203ENST00000395060 SPXQ9BT56 116 aa10.73□□□□□ -0.69
CLIP2-203ENST00000395060 CRLF1O75462 422 aa10.72□□□□□ -0.69
CLIP2-203ENST00000395060 MUSTN1Q8IVN3 82 aa10.72□□□□□ -0.69
CLIP2-203ENST00000395060 RHPN1-AS1Q9BWJ2 59 aa10.72□□□□□ -0.69
CLIP2-203ENST00000395060 MDFICQ9P1T7 246 aa10.72□□□□□ -0.69
CLIP2-203ENST00000395060 USP9YO00507 2555 aaPredicted RBP10.72□□□□□ -0.69
CLIP2-203ENST00000395060 IGIPA6NJ69 53 aa10.72□□□□□ -0.69
CLIP2-203ENST00000395060 EIF4EBP3O60516 100 aaPredicted RBP10.72□□□□□ -0.69
CLIP2-203ENST00000395060 C5orf56Q8N8D9 126 aa10.72□□□□□ -0.69
CLIP2-203ENST00000395060 POLQO75417 2590 aa10.72□□□□□ -0.69
CLIP2-203ENST00000395060 A0A0J9YXV3 536 aa10.71□□□□□ -0.69
CLIP2-203ENST00000395060 TEX49A0A1B0GTD5 131 aa10.71□□□□□ -0.69
CLIP2-203ENST00000395060 A8MZ25 164 aa10.71□□□□□ -0.69
CLIP2-203ENST00000395060 TEX29Q8N6K0 151 aa10.71□□□□□ -0.69
CLIP2-203ENST00000395060 PRM2P04554 102 aa10.71□□□□□ -0.69
CLIP2-203ENST00000395060 NPFFO15130 113 aa10.71□□□□□ -0.7
CLIP2-203ENST00000395060 UBE2E1P51965 193 aa10.71□□□□□ -0.7
CLIP2-203ENST00000395060 TRAV4A0A0B4J268 109 aa10.7□□□□□ -0.7
CLIP2-203ENST00000395060 BLCAPP62952 87 aa10.7□□□□□ -0.7
CLIP2-203ENST00000395060 TMEM95Q3KNT9 176 aa10.7□□□□□ -0.7
CLIP2-203ENST00000395060 LYRM7Q5U5X0 104 aa10.7□□□□□ -0.7
CLIP2-203ENST00000395060 ZFAND6Q6FIF0 208 aa10.7□□□□□ -0.7
CLIP2-203ENST00000395060 SLC25A29Q8N8R3 303 aa10.7□□□□□ -0.7
CLIP2-203ENST00000395060 C11orf71Q6IPW1 123 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms