RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 LINC00173Q6ZV60 143 aa11.33□□□□□ -0.6
VSIR-201ENST00000394957 NTN5Q8WTR8 489 aaPredicted RBP11.33□□□□□ -0.6
VSIR-201ENST00000394957 F6UB75 175 aa11.33□□□□□ -0.6
VSIR-201ENST00000394957 ACYP1P07311 99 aa11.33□□□□□ -0.6
VSIR-201ENST00000394957 FSTL3O95633 263 aa11.32□□□□□ -0.6
VSIR-201ENST00000394957 IGLC6P0CF74 106 aa11.32□□□□□ -0.6
VSIR-201ENST00000394957 PRO0628Q9UI54 55 aa11.32□□□□□ -0.6
VSIR-201ENST00000394957 TRBV25-1A0A075B6N4 114 aa11.32□□□□□ -0.6
VSIR-201ENST00000394957 IGHV4-59P01825 116 aa11.32□□□□□ -0.6
VSIR-201ENST00000394957 HRCT1Q6UXD1 115 aa11.32□□□□□ -0.6
VSIR-201ENST00000394957 Q8N8P6 123 aa11.32□□□□□ -0.6
VSIR-201ENST00000394957 JMJD1CQ15652 2540 aa11.31□□□□□ -0.6
VSIR-201ENST00000394957 PLA2G2AP14555 144 aa11.31□□□□□ -0.6
VSIR-201ENST00000394957 TMEM258P61165 79 aa11.31□□□□□ -0.6
VSIR-201ENST00000394957 IGHV3-38A0A0C4DH36 116 aa11.31□□□□□ -0.6
VSIR-201ENST00000394957 CDIP1Q9H305 208 aa11.31□□□□□ -0.6
VSIR-201ENST00000394957 COL4A2P08572 1712 aa11.31□□□□□ -0.6
VSIR-201ENST00000394957 ZFYVE26Q68DK2 2539 aa11.3□□□□□ -0.6
VSIR-201ENST00000394957 BRI3O95415 125 aa11.3□□□□□ -0.6
VSIR-201ENST00000394957 C11orf1Q9H5F2 150 aa11.3□□□□□ -0.6
VSIR-201ENST00000394957 IGHG4P01861 327 aa11.3□□□□□ -0.6
VSIR-201ENST00000394957 RPS28P62857 69 aaKnown RBP11.3□□□□□ -0.6
VSIR-201ENST00000394957 AGPAT4-IT1Q9H0P7 198 aa11.3□□□□□ -0.6
VSIR-201ENST00000394957 SPRY2O43597 315 aa11.3□□□□□ -0.6
VSIR-201ENST00000394957 DYNAPQ8N1N2 210 aa11.3□□□□□ -0.6
VSIR-201ENST00000394957 RITA1Q96K30 269 aa11.3□□□□□ -0.6
VSIR-201ENST00000394957 GHRHP01286 108 aa11.29□□□□□ -0.6
VSIR-201ENST00000394957 IGHV4-38-2P0DP08 117 aa11.29□□□□□ -0.6
VSIR-201ENST00000394957 IGHV7-4-1A0A0J9YVY3 117 aa11.29□□□□□ -0.6
VSIR-201ENST00000394957 RS1O15537 224 aa11.29□□□□□ -0.6
VSIR-201ENST00000394957 ZNRF2Q8NHG8 242 aa11.29□□□□□ -0.6
VSIR-201ENST00000394957 MORN5Q5VZ52 161 aa11.29□□□□□ -0.6
VSIR-201ENST00000394957 MRPL35Q9NZE8 188 aaKnown RBP11.29□□□□□ -0.6
VSIR-201ENST00000394957 IGKV1-17P01599 117 aa11.28□□□□□ -0.6
VSIR-201ENST00000394957 TRAV8-3A0A0A6YYJ7 113 aa11.28□□□□□ -0.6
VSIR-201ENST00000394957 TRAV4A0A0B4J268 109 aa11.28□□□□□ -0.6
VSIR-201ENST00000394957 VWC2LB2RUY7 222 aa11.28□□□□□ -0.6
VSIR-201ENST00000394957 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
VSIR-201ENST00000394957 CHD8Q9HCK8 2581 aa11.28□□□□□ -0.6
VSIR-201ENST00000394957 CFAP126Q5VTH2 177 aa11.27□□□□□ -0.6
VSIR-201ENST00000394957 LOC107984640A0A0U1RRK4 108 aa11.27□□□□□ -0.61
VSIR-201ENST00000394957 EGR2P11161 476 aaPredicted RBP11.27□□□□□ -0.61
VSIR-201ENST00000394957 FOXE3Q13461 319 aa11.27□□□□□ -0.61
VSIR-201ENST00000394957 DSCAMO60469 2012 aa11.27□□□□□ -0.61
VSIR-201ENST00000394957 LMO4P61968 165 aa11.27□□□□□ -0.61
VSIR-201ENST00000394957 LTAP01374 205 aa11.27□□□□□ -0.61
VSIR-201ENST00000394957 BLCAPP62952 87 aa11.27□□□□□ -0.61
VSIR-201ENST00000394957 USP9XQ93008 2570 aaPredicted RBP11.27□□□□□ -0.61
VSIR-201ENST00000394957 I3L3M4 83 aa11.26□□□□□ -0.61
VSIR-201ENST00000394957 ZFP36P26651 326 aaKnown RBP11.26□□□□□ -0.61
VSIR-201ENST00000394957 C22orf34Q6ZV56 151 aa11.26□□□□□ -0.61
VSIR-201ENST00000394957 UBE2DNLQ8IWF7 75 aa11.26□□□□□ -0.61
VSIR-201ENST00000394957 IGHV7-81A0A0B4J1V7 117 aa11.26□□□□□ -0.61
VSIR-201ENST00000394957 FRMD6-AS1P0C7T7 363 aa11.26□□□□□ -0.61
VSIR-201ENST00000394957 SS18Q15532 418 aa11.26□□□□□ -0.61
VSIR-201ENST00000394957 K7EIM0 57 aa11.26□□□□□ -0.61
VSIR-201ENST00000394957 GNRH2O43555 120 aa11.26□□□□□ -0.61
VSIR-201ENST00000394957 DSCAML1Q8TD84 2053 aa11.26□□□□□ -0.61
VSIR-201ENST00000394957 DEFB136Q30KP8 78 aa11.26□□□□□ -0.61
VSIR-201ENST00000394957 IMUPQ9GZP8 106 aa11.26□□□□□ -0.61
VSIR-201ENST00000394957 PATE2Q6UY27 113 aa11.25□□□□□ -0.61
VSIR-201ENST00000394957 SIRPDQ9H106 197 aa11.25□□□□□ -0.61
VSIR-201ENST00000394957 LEPROTO15243 131 aa11.25□□□□□ -0.61
VSIR-201ENST00000394957 UTF1Q5T230 341 aa11.25□□□□□ -0.61
VSIR-201ENST00000394957 NPBQ8NG41 125 aa11.25□□□□□ -0.61
VSIR-201ENST00000394957 IGLV1-47P01700 117 aa11.24□□□□□ -0.61
VSIR-201ENST00000394957 PFN2P35080 140 aa11.24□□□□□ -0.61
VSIR-201ENST00000394957 LAMTOR3Q9UHA4 124 aa11.24□□□□□ -0.61
VSIR-201ENST00000394957 BRK1Q8WUW1 75 aa11.24□□□□□ -0.61
VSIR-201ENST00000394957 EML5Q05BV3 1969 aa11.24□□□□□ -0.61
VSIR-201ENST00000394957 DAD1P61803 113 aa11.24□□□□□ -0.61
VSIR-201ENST00000394957 C11orf71Q6IPW1 123 aa11.24□□□□□ -0.61
VSIR-201ENST00000394957 I3L2K1 104 aa11.23□□□□□ -0.61
VSIR-201ENST00000394957 HLA-DRB4P13762 266 aa11.23□□□□□ -0.61
VSIR-201ENST00000394957 HLA-DRB4X5D2U9 266 aa11.23□□□□□ -0.61
VSIR-201ENST00000394957 GATA1P15976 413 aaPredicted RBP11.23□□□□□ -0.61
VSIR-201ENST00000394957 F8VRH5 84 aa11.23□□□□□ -0.61
VSIR-201ENST00000394957 HOXD3P31249 432 aaPredicted RBP11.23□□□□□ -0.61
VSIR-201ENST00000394957 KIR2DL5BQ8NHK3 375 aa11.23□□□□□ -0.61
VSIR-201ENST00000394957 TMEM141Q96I45 108 aa11.23□□□□□ -0.61
VSIR-201ENST00000394957 DKK2Q9UBU2 259 aa11.23□□□□□ -0.61
VSIR-201ENST00000394957 RNASE13Q5GAN3 156 aaKnown RBP11.23□□□□□ -0.61
VSIR-201ENST00000394957 CFHR4Q92496 578 aa11.23□□□□□ -0.61
VSIR-201ENST00000394957 PRO1854Q9UHT4 67 aa11.23□□□□□ -0.61
VSIR-201ENST00000394957 USP9YO00507 2555 aaPredicted RBP11.22□□□□□ -0.61
VSIR-201ENST00000394957 Q8N7P7 452 aa11.22□□□□□ -0.61
VSIR-201ENST00000394957 LINC00526Q96FQ7 95 aa11.22□□□□□ -0.61
VSIR-201ENST00000394957 KMT2EQ8IZD2 1858 aa11.22□□□□□ -0.61
VSIR-201ENST00000394957 CTSGP08311 255 aa11.22□□□□□ -0.61
VSIR-201ENST00000394957 INS-IGF2F8WCM5 200 aa11.22□□□□□ -0.61
VSIR-201ENST00000394957 NCKAP5O14513 1909 aa11.22□□□□□ -0.61
VSIR-201ENST00000394957 IGKV1OR2-108A0A075B7D4 117 aa11.21□□□□□ -0.61
VSIR-201ENST00000394957 E7EUB6 86 aa11.21□□□□□ -0.61
VSIR-201ENST00000394957 TNFRSF13BO14836 293 aaPredicted RBP11.21□□□□□ -0.61
VSIR-201ENST00000394957 GP9P14770 177 aa11.21□□□□□ -0.61
VSIR-201ENST00000394957 A0A096LPF7 62 aa11.21□□□□□ -0.62
VSIR-201ENST00000394957 IGLV11-55A0A075B6I3 123 aa11.21□□□□□ -0.62
VSIR-201ENST00000394957 PSCAO43653 123 aa11.2□□□□□ -0.62
VSIR-201ENST00000394957 MSRB1Q9NZV6 116 aa11.2□□□□□ -0.62
VSIR-201ENST00000394957 MRPL36Q9P0J6 103 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms