RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 J3KT08 172 aa5.84□□□□□ -1.47
SYNE2-205ENST00000394768 ETDBQ3ZM63 59 aa5.84□□□□□ -1.47
SYNE2-205ENST00000394768 DSCAML1Q8TD84 2053 aa5.84□□□□□ -1.47
SYNE2-205ENST00000394768 LINC01548A6NM66 108 aa5.84□□□□□ -1.47
SYNE2-205ENST00000394768 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.84□□□□□ -1.47
SYNE2-205ENST00000394768 DEFB112Q30KQ8 113 aa5.84□□□□□ -1.47
SYNE2-205ENST00000394768 TRBV10-1A0A0K0K1A3 114 aa5.84□□□□□ -1.47
SYNE2-205ENST00000394768 K7EMT4 169 aa5.84□□□□□ -1.47
SYNE2-205ENST00000394768 IGHV4-28A0A0C4DH34 117 aa5.84□□□□□ -1.48
SYNE2-205ENST00000394768 SPAG11BQ08648 103 aa5.84□□□□□ -1.48
SYNE2-205ENST00000394768 TRBV10-2A0A0K0K1G8 114 aa5.83□□□□□ -1.48
SYNE2-205ENST00000394768 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
SYNE2-205ENST00000394768 C11orf45Q8TAV5 145 aa5.83□□□□□ -1.48
SYNE2-205ENST00000394768 FXYD5Q96DB9 178 aa5.83□□□□□ -1.48
SYNE2-205ENST00000394768 KIAA1549LQ6ZVL6 1849 aa5.83□□□□□ -1.48
SYNE2-205ENST00000394768 V9GYV3 84 aa5.83□□□□□ -1.48
SYNE2-205ENST00000394768 COL4A5P29400 1685 aa5.83□□□□□ -1.48
SYNE2-205ENST00000394768 RNF138Q8WVD3 245 aa5.83□□□□□ -1.48
SYNE2-205ENST00000394768 UBE2D1P51668 147 aa5.83□□□□□ -1.48
SYNE2-205ENST00000394768 WT1-ASQ06250 92 aa5.83□□□□□ -1.48
SYNE2-205ENST00000394768 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.83□□□□□ -1.48
SYNE2-205ENST00000394768 IGKV2-29A2NJV5 120 aaPredicted RBP5.83□□□□□ -1.48
SYNE2-205ENST00000394768 IGHV4-59P01825 116 aa5.83□□□□□ -1.48
SYNE2-205ENST00000394768 ATP5EP56381 51 aaPredicted RBP5.82□□□□□ -1.48
SYNE2-205ENST00000394768 ATRAIDQ6UW56 229 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 C5orf38Q86SI9 138 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 SPRY2O43597 315 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 ATP5EP2Q5VTU8 51 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 NDUFA11Q86Y39 141 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 ZNF664Q8N3J9 261 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 ZNF491Q8N8L2 437 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 SLX1AQ9BQ83 275 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 PRO0255Q9UI72 69 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 IGHV3-30P01768 117 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 IGHV3-33P01772 117 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 IGHV3-30-3P0DP02 117 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 IGHV3-30-5P0DP03 117 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 PLA2G2CQ5R387 149 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 SPANXB1Q9NS25 103 aaPredicted RBP5.82□□□□□ -1.48
SYNE2-205ENST00000394768 LYRM9A8MSI8 78 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 COX7BP24311 80 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 THSD7BQ9C0I4 1608 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 FHL1Q13642 323 aa5.82□□□□□ -1.48
SYNE2-205ENST00000394768 IGLV10-54A0A075B6I4 117 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 IGHV4-4A0A075B6R2 117 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 TEX22C9J3V5 150 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 PRR30Q53SZ7 412 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-205ENST00000394768 UFSP1Q6NVU6 142 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 C12orf74Q32Q52 190 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 NDUFS7O75251 213 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 PRR20EP86478 221 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 PRR20CP86479 221 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 PRR20DP86480 221 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 PRR20BP86481 221 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 PRR20AP86496 221 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 NUP210LQ5VU65 1888 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 LINC00474Q9P2X8 69 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 LOC105371267A0A1B0GV96 52 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 H3BMG7 143 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 CENPVL3A0A0U1RRI6 287 aa5.81□□□□□ -1.48
SYNE2-205ENST00000394768 DAZAP2Q15038 168 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-205ENST00000394768 H3BT86 120 aa5.8□□□□□ -1.48
SYNE2-205ENST00000394768 C15orf65H3BRN8 121 aa5.8□□□□□ -1.48
SYNE2-205ENST00000394768 DUX4L9Q6RFH8 374 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-205ENST00000394768 CUL9Q8IWT3 2517 aa5.8□□□□□ -1.48
SYNE2-205ENST00000394768 MRPL55Q7Z7F7 128 aaKnown RBP5.8□□□□□ -1.48
SYNE2-205ENST00000394768 TMEM61Q8N0U2 210 aa5.8□□□□□ -1.48
SYNE2-205ENST00000394768 TET2Q6N021 2002 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-205ENST00000394768 SLURP1P55000 103 aa5.8□□□□□ -1.48
SYNE2-205ENST00000394768 C2orf70A6NJV1 201 aa5.8□□□□□ -1.48
SYNE2-205ENST00000394768 IGLV2-23P01705 113 aa5.8□□□□□ -1.48
SYNE2-205ENST00000394768 SERP1Q9Y6X1 66 aa5.8□□□□□ -1.48
SYNE2-205ENST00000394768 AGRNO00468 2067 aa5.8□□□□□ -1.48
SYNE2-205ENST00000394768 RNF185Q96GF1 192 aa5.79□□□□□ -1.48
SYNE2-205ENST00000394768 LOXL1Q08397 574 aaPredicted RBP5.79□□□□□ -1.48
SYNE2-205ENST00000394768 RNASE13Q5GAN3 156 aaKnown RBP5.79□□□□□ -1.48
SYNE2-205ENST00000394768 TEN1Q86WV5 123 aa5.79□□□□□ -1.48
SYNE2-205ENST00000394768 NTN5Q8WTR8 489 aaPredicted RBP5.79□□□□□ -1.48
SYNE2-205ENST00000394768 DEFB135Q30KP9 77 aa5.79□□□□□ -1.48
SYNE2-205ENST00000394768 PIP4P1Q86T03 277 aa5.79□□□□□ -1.48
SYNE2-205ENST00000394768 BPY2O14599 106 aa5.79□□□□□ -1.48
SYNE2-205ENST00000394768 IGLC7A0M8Q6 106 aa5.79□□□□□ -1.48
SYNE2-205ENST00000394768 LGALS9O00182 355 aa5.79□□□□□ -1.48
SYNE2-205ENST00000394768 C16orf54Q6UWD8 224 aa5.79□□□□□ -1.48
SYNE2-205ENST00000394768 LRRC75A-AS1Q8N1F1 130 aa5.79□□□□□ -1.48
SYNE2-205ENST00000394768 UBE2D4Q9Y2X8 147 aa5.79□□□□□ -1.48
SYNE2-205ENST00000394768 Q6ZRM9 215 aa5.79□□□□□ -1.48
SYNE2-205ENST00000394768 GTSF1Q8WW33 167 aa5.79□□□□□ -1.48
SYNE2-205ENST00000394768 SHISA2Q6UWI4 295 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 POLR3KQ9Y2Y1 108 aaPredicted RBP5.78□□□□□ -1.48
SYNE2-205ENST00000394768 ZNF106Q9H2Y7 1883 aaKnown RBP5.78□□□□□ -1.48
SYNE2-205ENST00000394768 DEFB136Q30KP8 78 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 ODF3Q96PU9 254 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 C11orf86A6NJI1 115 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 C5orf56Q8N8D9 126 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 APRG1Q8IVJ8 170 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 CYYR1Q96J86 154 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 AGPAT4-IT1Q9H0P7 198 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 KLK12Q9UKR0 248 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 NDUFC1O43677 76 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms