RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 GAGE1Q13065 139 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 GAGE4Q13068 117 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 GAGE5Q13069 117 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 RHOHQ15669 191 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 GAGE13Q4V321 117 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 UFSP1Q6NVU6 142 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 LINC00336Q6ZUF6 198 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 C6orf223Q8N319 242 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 SYT8Q8NBV8 401 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 TPPP3Q9BW30 176 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 HERC2O95714 4834 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 KIAA1109Q2LD37 5005 aa5.23□□□□□ -1.57
HMGB3P1-201ENST00000393368 TRBV6-4A0A1B0GX49 114 aa5.23□□□□□ -1.57
HMGB3P1-201ENST00000393368 RBFOX3A6NFN3 312 aa5.23□□□□□ -1.57
HMGB3P1-201ENST00000393368 CEBPGP53567 150 aa5.23□□□□□ -1.57
HMGB3P1-201ENST00000393368 BLOC1S1P78537 153 aa5.23□□□□□ -1.57
HMGB3P1-201ENST00000393368 TOR2AQ5JU69 321 aa5.23□□□□□ -1.57
HMGB3P1-201ENST00000393368 ZFP82Q8N141 532 aa5.23□□□□□ -1.57
HMGB3P1-201ENST00000393368 OR2D3Q8NGH3 330 aa5.23□□□□□ -1.57
HMGB3P1-201ENST00000393368 SFRP2Q96HF1 295 aa5.23□□□□□ -1.57
HMGB3P1-201ENST00000393368 TXNDC17Q9BRA2 123 aa5.23□□□□□ -1.57
HMGB3P1-201ENST00000393368 PRADC1Q9BSG0 188 aa5.23□□□□□ -1.57
HMGB3P1-201ENST00000393368 TNFRSF18Q9Y5U5 241 aa5.23□□□□□ -1.57
HMGB3P1-201ENST00000393368 LRP1BQ9NZR2 4599 aa5.22□□□□□ -1.57
HMGB3P1-201ENST00000393368 C19orf71A6NCJ1 209 aa5.22□□□□□ -1.57
HMGB3P1-201ENST00000393368 K7EN84 100 aa5.22□□□□□ -1.57
HMGB3P1-201ENST00000393368 SNAI2O43623 268 aa5.22□□□□□ -1.57
HMGB3P1-201ENST00000393368 CRYGDP07320 174 aa5.22□□□□□ -1.57
HMGB3P1-201ENST00000393368 LINC00315P59091 139 aa5.22□□□□□ -1.57
HMGB3P1-201ENST00000393368 TTC32Q5I0X7 151 aa5.22□□□□□ -1.57
HMGB3P1-201ENST00000393368 SOHLH1Q5JUK2 328 aa5.22□□□□□ -1.57
HMGB3P1-201ENST00000393368 ZFP2Q6ZN57 461 aa5.22□□□□□ -1.57
HMGB3P1-201ENST00000393368 Q8N3U1 123 aa5.22□□□□□ -1.57
HMGB3P1-201ENST00000393368 LYPD6BQ8NI32 183 aa5.22□□□□□ -1.57
HMGB3P1-201ENST00000393368 P01737 135 aa5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 CXCL1P09341 107 aa5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 IGLC6P0CF74 106 aa5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 LINC00694P0DN24 101 aa5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 MED14OSP0DP75 135 aa5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 OR10J3Q5JRS4 329 aa5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 PIK3CD-AS1Q5SR53 167 aa5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 SPANXN1Q5VSR9 72 aa5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 OCC1Q8TAD7 63 aa5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 DAZAP1Q96EP5 407 aaKnown RBP5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 SSBP4Q9BWG4 385 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 EIF5A2Q9GZV4 153 aaKnown RBP5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 RNASE7Q9H1E1 156 aaKnown RBP5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 MSRB1Q9NZV6 116 aa5.21□□□□□ -1.58
HMGB3P1-201ENST00000393368 A0A1W2PPQ1 181 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 RHODO00212 210 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 CIDEAO60543 219 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 IGHV3-30P01768 117 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 IGHV3-33P01772 117 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 OR5AL1P0C617 328 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 IGHV3-30-3P0DP02 117 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 IGHV3-30-5P0DP03 117 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 TAGLN2P37802 199 aaKnown RBP5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 ZNF56Q15929 161 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 FER1L6-AS1Q8NA97 138 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 NUDT10Q8NFP7 164 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 ATP6V0E2Q8NHE4 81 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 NUDT11Q96G61 164 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 FAM210AQ96ND0 272 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 GTSF1LQ9H1H1 148 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 LY96Q9Y6Y9 160 aa5.2□□□□□ -1.58
HMGB3P1-201ENST00000393368 RYR1P21817 5038 aa5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 C9JQL5 133 aa5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 TMEM250H0YL14 139 aa5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 MGPP08493 103 aa5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 SRP19P09132 144 aaKnown RBP5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 DNAH10OSP0CZ25 163 aa5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 FUSP35637 526 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 SRSF3P84103 164 aaKnown RBP5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 TEX261Q6UWH6 196 aa5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 LYZL1Q6UWQ5 148 aa5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 Q6ZRN7 208 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 SH2D6Q7Z4S9 175 aa5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 SMIM12Q96EX1 92 aa5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 RPP21Q9H633 154 aaKnown RBP5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 KIF25-AS1Q9Y6Z4 181 aa5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 APOBP04114 4563 aaKnown RBP5.19□□□□□ -1.58
HMGB3P1-201ENST00000393368 TRAV8-6A0A0B4J262 113 aa5.18□□□□□ -1.58
HMGB3P1-201ENST00000393368 IGHV3-38A0A0C4DH36 116 aa5.18□□□□□ -1.58
HMGB3P1-201ENST00000393368 F5H697 171 aa5.18□□□□□ -1.58
HMGB3P1-201ENST00000393368 EVI2AP22794 236 aa5.18□□□□□ -1.58
HMGB3P1-201ENST00000393368 TIRAPP58753 221 aa5.18□□□□□ -1.58
HMGB3P1-201ENST00000393368 RPS20P60866 119 aaKnown RBP5.18□□□□□ -1.58
HMGB3P1-201ENST00000393368 RAB4BP61018 213 aa5.18□□□□□ -1.58
HMGB3P1-201ENST00000393368 LELP1Q5T871 98 aa5.18□□□□□ -1.58
HMGB3P1-201ENST00000393368 NEXN-AS1Q8NBZ9 246 aa5.18□□□□□ -1.58
HMGB3P1-201ENST00000393368 GTSF1Q8WW33 167 aa5.18□□□□□ -1.58
HMGB3P1-201ENST00000393368 AP1S3Q96PC3 154 aa5.18□□□□□ -1.58
HMGB3P1-201ENST00000393368 SMIM7Q9BQ49 75 aa5.18□□□□□ -1.58
HMGB3P1-201ENST00000393368 ZNF727A8MUV8 499 aa5.17□□□□□ -1.58
HMGB3P1-201ENST00000393368 SMIM17P0DL12 118 aa5.17□□□□□ -1.58
HMGB3P1-201ENST00000393368 CTRLP40313 264 aa5.17□□□□□ -1.58
HMGB3P1-201ENST00000393368 KRTAP10-2P60368 255 aa5.17□□□□□ -1.58
HMGB3P1-201ENST00000393368 UBE2D3P61077 147 aa5.17□□□□□ -1.58
HMGB3P1-201ENST00000393368 UBE2D2P62837 147 aa5.17□□□□□ -1.58
HMGB3P1-201ENST00000393368 LINC01556Q5JQF7 62 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms