RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 FAM74A4Q5TZK3 123 aa12.92□□□□□ -0.34
NME1-203ENST00000393196 LINC00336Q6ZUF6 198 aa12.92□□□□□ -0.34
NME1-203ENST00000393196 FAM231DQ6ZW35 169 aa12.92□□□□□ -0.34
NME1-203ENST00000393196 NUDT10Q8NFP7 164 aa12.92□□□□□ -0.34
NME1-203ENST00000393196 NUDT11Q96G61 164 aa12.92□□□□□ -0.34
NME1-203ENST00000393196 RPP21Q9H633 154 aaKnown RBP12.92□□□□□ -0.34
NME1-203ENST00000393196 DNAH6Q9C0G6 4158 aa12.91□□□□□ -0.34
NME1-203ENST00000393196 M0R2N4 97 aa12.91□□□□□ -0.34
NME1-203ENST00000393196 SMIM17P0DL12 118 aa12.91□□□□□ -0.34
NME1-203ENST00000393196 BTF3P20290 206 aaKnown RBP12.91□□□□□ -0.34
NME1-203ENST00000393196 WDR73Q6P4I2 378 aa12.91□□□□□ -0.34
NME1-203ENST00000393196 TPPP3Q9BW30 176 aa12.91□□□□□ -0.34
NME1-203ENST00000393196 JPT2Q9H910 190 aa12.91□□□□□ -0.34
NME1-203ENST00000393196 KMT2AQ03164 3969 aa12.9□□□□□ -0.34
NME1-203ENST00000393196 TRBV10-1A0A0K0K1A3 114 aa12.9□□□□□ -0.34
NME1-203ENST00000393196 K7EN84 100 aa12.9□□□□□ -0.34
NME1-203ENST00000393196 K7EP13 123 aa12.9□□□□□ -0.34
NME1-203ENST00000393196 SIVA1O15304 175 aa12.9□□□□□ -0.34
NME1-203ENST00000393196 CRYGDP07320 174 aa12.9□□□□□ -0.34
NME1-203ENST00000393196 CT83Q5H943 113 aa12.9□□□□□ -0.34
NME1-203ENST00000393196 SAMD10Q9BYL1 202 aa12.9□□□□□ -0.34
NME1-203ENST00000393196 A0A087WWL8 130 aa12.89□□□□□ -0.35
NME1-203ENST00000393196 RAB4BP61018 213 aa12.89□□□□□ -0.35
NME1-203ENST00000393196 TRAV9-2A0A087WT02 112 aa12.88□□□□□ -0.35
NME1-203ENST00000393196 LOC100131303A0A0U1RQF7 123 aa12.88□□□□□ -0.35
NME1-203ENST00000393196 A8MWL6 223 aa12.88□□□□□ -0.35
NME1-203ENST00000393196 GATCO43716 136 aaKnown RBP12.88□□□□□ -0.35
NME1-203ENST00000393196 TRGC1P0CF51 173 aa12.88□□□□□ -0.35
NME1-203ENST00000393196 GZMBP10144 247 aa12.88□□□□□ -0.35
NME1-203ENST00000393196 ERVFC1-1P60608 527 aa12.88□□□□□ -0.35
NME1-203ENST00000393196 C1orf134Q5TEV5 83 aa12.88□□□□□ -0.35
NME1-203ENST00000393196 LINC01551Q86U37 167 aa12.88□□□□□ -0.35
NME1-203ENST00000393196 ATP6V0E2Q8NHE4 81 aa12.88□□□□□ -0.35
NME1-203ENST00000393196 RNASE7Q9H1E1 156 aaKnown RBP12.88□□□□□ -0.35
NME1-203ENST00000393196 HYDINQ4G0P3 5121 aa12.88□□□□□ -0.35
NME1-203ENST00000393196 CTRLP40313 264 aa12.87□□□□□ -0.35
NME1-203ENST00000393196 TMEM241Q24JQ0 296 aa12.87□□□□□ -0.35
NME1-203ENST00000393196 A0A087WWC5 75 aa12.86□□□□□ -0.35
NME1-203ENST00000393196 TRAV8-6A0A0B4J262 113 aa12.86□□□□□ -0.35
NME1-203ENST00000393196 ZNF56Q15929 161 aa12.86□□□□□ -0.35
NME1-203ENST00000393196 Q6ZSN1 163 aa12.86□□□□□ -0.35
NME1-203ENST00000393196 C15orf54Q8N8G6 183 aa12.86□□□□□ -0.35
NME1-203ENST00000393196 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
NME1-203ENST00000393196 CNFNQ9BYD5 112 aa12.86□□□□□ -0.35
NME1-203ENST00000393196 GTSF1LQ9H1H1 148 aa12.86□□□□□ -0.35
NME1-203ENST00000393196 OSTCQ9NRP0 149 aa12.86□□□□□ -0.35
NME1-203ENST00000393196 MUC21A0A0G2JKD1 596 aa12.85□□□□□ -0.35
NME1-203ENST00000393196 MUC21A0A140T8X8 626 aa12.85□□□□□ -0.35
NME1-203ENST00000393196 RPL36AP83881 106 aaKnown RBP12.85□□□□□ -0.35
NME1-203ENST00000393196 LYZL1Q6UWQ5 148 aa12.85□□□□□ -0.35
NME1-203ENST00000393196 RPL36ALQ969Q0 106 aaKnown RBP12.85□□□□□ -0.35
NME1-203ENST00000393196 NAT8Q9UHE5 227 aa12.85□□□□□ -0.35
NME1-203ENST00000393196 NACAE9PAV3 2078 aa12.84□□□□□ -0.35
NME1-203ENST00000393196 GAGE12JA6NER3 117 aa12.84□□□□□ -0.35
NME1-203ENST00000393196 H7C1H1 209 aa12.84□□□□□ -0.35
NME1-203ENST00000393196 LINC00694P0DN24 101 aa12.84□□□□□ -0.35
NME1-203ENST00000393196 EVI2AP22794 236 aa12.84□□□□□ -0.35
NME1-203ENST00000393196 GAGE1Q13065 139 aa12.84□□□□□ -0.35
NME1-203ENST00000393196 GAGE4Q13068 117 aa12.84□□□□□ -0.35
NME1-203ENST00000393196 GAGE5Q13069 117 aa12.84□□□□□ -0.35
NME1-203ENST00000393196 GAGE13Q4V321 117 aa12.84□□□□□ -0.35
NME1-203ENST00000393196 LELP1Q5T871 98 aa12.84□□□□□ -0.35
NME1-203ENST00000393196 C6orf223Q8N319 242 aa12.84□□□□□ -0.35
NME1-203ENST00000393196 C14orf178Q8N769 122 aaPredicted RBP12.84□□□□□ -0.35
NME1-203ENST00000393196 FAM231BA6NCW3 169 aa12.83□□□□□ -0.36
NME1-203ENST00000393196 F5H697 171 aa12.83□□□□□ -0.36
NME1-203ENST00000393196 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.36
NME1-203ENST00000393196 C10orf126Q8N4M7 172 aa12.83□□□□□ -0.36
NME1-203ENST00000393196 BORCS7Q96B45 105 aa12.83□□□□□ -0.36
NME1-203ENST00000393196 GFRA4Q9GZZ7 299 aa12.83□□□□□ -0.36
NME1-203ENST00000393196 DNAH10OSP0CZ25 163 aa12.82□□□□□ -0.36
NME1-203ENST00000393196 SSTP61278 116 aa12.82□□□□□ -0.36
NME1-203ENST00000393196 OR10J3Q5JRS4 329 aa12.82□□□□□ -0.36
NME1-203ENST00000393196 CLLU1Q5K131 121 aa12.82□□□□□ -0.36
NME1-203ENST00000393196 OR10G8Q8NGN5 311 aa12.82□□□□□ -0.36
NME1-203ENST00000393196 TRBV7-3A0A075B6L6 115 aa12.81□□□□□ -0.36
NME1-203ENST00000393196 NTF3P20783 257 aa12.81□□□□□ -0.36
NME1-203ENST00000393196 FOXA3P55318 350 aaPredicted RBP12.81□□□□□ -0.36
NME1-203ENST00000393196 TWIST1Q15672 202 aa12.81□□□□□ -0.36
NME1-203ENST00000393196 TSKUQ8WUA8 353 aa12.81□□□□□ -0.36
NME1-203ENST00000393196 DPH3P1Q9H4G8 78 aa12.81□□□□□ -0.36
NME1-203ENST00000393196 KIF25-AS1Q9Y6Z4 181 aa12.81□□□□□ -0.36
NME1-203ENST00000393196 IGHV3-38A0A0C4DH36 116 aa12.8□□□□□ -0.36
NME1-203ENST00000393196 C9JQL5 133 aa12.8□□□□□ -0.36
NME1-203ENST00000393196 ADIRFQ15847 76 aa12.8□□□□□ -0.36
NME1-203ENST00000393196 ISOC2Q96AB3 205 aa12.8□□□□□ -0.36
NME1-203ENST00000393196 RTL8CO15255 209 aa12.79□□□□□ -0.36
NME1-203ENST00000393196 RPL23P62829 140 aaKnown RBP12.79□□□□□ -0.36
NME1-203ENST00000393196 SRSF3P84103 164 aaKnown RBP12.79□□□□□ -0.36
NME1-203ENST00000393196 NFE4Q86UQ8 179 aa12.79□□□□□ -0.36
NME1-203ENST00000393196 WFDC10BQ8IUB3 73 aa12.79□□□□□ -0.36
NME1-203ENST00000393196 GTSF1Q8WW33 167 aa12.79□□□□□ -0.36
NME1-203ENST00000393196 PRSS29PA6NIE9 313 aa12.78□□□□□ -0.36
NME1-203ENST00000393196 MGPP08493 103 aa12.78□□□□□ -0.36
NME1-203ENST00000393196 LINC00315P59091 139 aa12.78□□□□□ -0.36
NME1-203ENST00000393196 UBE2D3P61077 147 aa12.78□□□□□ -0.36
NME1-203ENST00000393196 UBE2D2P62837 147 aa12.78□□□□□ -0.36
NME1-203ENST00000393196 TMEM97Q5BJF2 176 aa12.78□□□□□ -0.36
NME1-203ENST00000393196 LINC01556Q5JQF7 62 aa12.78□□□□□ -0.36
NME1-203ENST00000393196 DNAJC30Q96LL9 226 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms