RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 RBMY1A1P0DJD3 496 aaKnown RBP11.08□□□□□ -0.64
MKS1-202ENST00000393119 RBMY1CP0DJD4 496 aa11.08□□□□□ -0.64
MKS1-202ENST00000393119 RBMY1FQ15415 496 aaKnown RBP11.08□□□□□ -0.64
MKS1-202ENST00000393119 NEGR1Q7Z3B1 354 aa11.08□□□□□ -0.64
MKS1-202ENST00000393119 GATD1Q8NB37 220 aa11.08□□□□□ -0.64
MKS1-202ENST00000393119 JMJD8Q96S16 334 aa11.08□□□□□ -0.64
MKS1-202ENST00000393119 ZNF256Q9Y2P7 627 aaPredicted RBP11.08□□□□□ -0.64
MKS1-202ENST00000393119 LENEPQ9Y5L5 61 aa11.08□□□□□ -0.64
MKS1-202ENST00000393119 CRLF1O75462 422 aa11.07□□□□□ -0.64
MKS1-202ENST00000393119 MRPL51Q4U2R6 128 aaKnown RBP11.07□□□□□ -0.64
MKS1-202ENST00000393119 Q6AWC8 147 aa11.07□□□□□ -0.64
MKS1-202ENST00000393119 MAP6D1Q9H9H5 199 aa11.07□□□□□ -0.64
MKS1-202ENST00000393119 HSPB8Q9UJY1 196 aa11.07□□□□□ -0.64
MKS1-202ENST00000393119 TRAV26-2A0A0B4J265 109 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 LOC389332A0A1B0GUA5 103 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 M0R381 172 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 AMTNQ6UX39 209 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 WFDC10AQ9H1F0 79 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 C9orf118A6NHY6 69 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 H3BRM9 83 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 CIDEAO60543 219 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 HTN1P15515 57 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 TMEM97Q5BJF2 176 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 FAM104BQ5XKR9 115 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 RNF185Q96GF1 192 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 MCRIP2Q9BUT9 160 aaKnown RBP11.06□□□□□ -0.64
MKS1-202ENST00000393119 ZNF747Q9BV97 191 aa11.06□□□□□ -0.64
MKS1-202ENST00000393119 RNASE3P12724 160 aaKnown RBP11.05□□□□□ -0.64
MKS1-202ENST00000393119 ZNF493Q6ZR52 646 aa11.05□□□□□ -0.64
MKS1-202ENST00000393119 FBN1P35555 2871 aaKnown RBP11.05□□□□□ -0.64
MKS1-202ENST00000393119 GAGE10A6NGK3 116 aa11.05□□□□□ -0.64
MKS1-202ENST00000393119 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.05□□□□□ -0.64
MKS1-202ENST00000393119 JPT2Q9H910 190 aa11.05□□□□□ -0.64
MKS1-202ENST00000393119 K7EP34 96 aa11.04□□□□□ -0.64
MKS1-202ENST00000393119 S100A4P26447 101 aaKnown RBP11.04□□□□□ -0.64
MKS1-202ENST00000393119 ODF3L2Q3SX64 289 aa11.04□□□□□ -0.64
MKS1-202ENST00000393119 SPANXN1Q5VSR9 72 aa11.04□□□□□ -0.64
MKS1-202ENST00000393119 FOXI2Q6ZQN5 318 aa11.04□□□□□ -0.64
MKS1-202ENST00000393119 MDFICQ9P1T7 246 aa11.04□□□□□ -0.64
MKS1-202ENST00000393119 H3BMM0 161 aa11.04□□□□□ -0.64
MKS1-202ENST00000393119 CNFNQ9BYD5 112 aa11.04□□□□□ -0.64
MKS1-202ENST00000393119 RIPPLY3P57055 190 aa11.03□□□□□ -0.64
MKS1-202ENST00000393119 NPYP01303 97 aa11.03□□□□□ -0.64
MKS1-202ENST00000393119 CD7P09564 240 aa11.03□□□□□ -0.64
MKS1-202ENST00000393119 GTF2H5Q6ZYL4 71 aa11.03□□□□□ -0.64
MKS1-202ENST00000393119 BOD1L2Q8IYS8 172 aa11.03□□□□□ -0.64
MKS1-202ENST00000393119 A0A096LNJ9 63 aa11.02□□□□□ -0.65
MKS1-202ENST00000393119 MUC4Q99102 2169 aa11.02□□□□□ -0.65
MKS1-202ENST00000393119 SNAI2O43623 268 aa11.02□□□□□ -0.65
MKS1-202ENST00000393119 IFI27P40305 119 aaPredicted RBP11.02□□□□□ -0.65
MKS1-202ENST00000393119 ASIPP42127 132 aa11.02□□□□□ -0.65
MKS1-202ENST00000393119 SAMD13Q5VXD3 122 aa11.02□□□□□ -0.65
MKS1-202ENST00000393119 FAM159AQ6UWV7 190 aa11.02□□□□□ -0.65
MKS1-202ENST00000393119 HLA-DRB4P13762 266 aa11.01□□□□□ -0.65
MKS1-202ENST00000393119 Q8N1Y9 231 aa11.01□□□□□ -0.65
MKS1-202ENST00000393119 C14orf178Q8N769 122 aaPredicted RBP11.01□□□□□ -0.65
MKS1-202ENST00000393119 PRELID3AQ96N28 172 aa11.01□□□□□ -0.65
MKS1-202ENST00000393119 HLA-DRB4X5D2U9 266 aa11.01□□□□□ -0.65
MKS1-202ENST00000393119 CKS2P33552 79 aa11.01□□□□□ -0.65
MKS1-202ENST00000393119 A0A1B0GW15 77 aa11□□□□□ -0.65
MKS1-202ENST00000393119 SIVA1O15304 175 aa11□□□□□ -0.65
MKS1-202ENST00000393119 LEPP41159 167 aa11□□□□□ -0.65
MKS1-202ENST00000393119 DEFB104AQ8WTQ1 72 aa11□□□□□ -0.65
MKS1-202ENST00000393119 AP5S1Q9NUS5 200 aa11□□□□□ -0.65
MKS1-202ENST00000393119 PHLDA3Q9Y5J5 127 aa11□□□□□ -0.65
MKS1-202ENST00000393119 SMIM17P0DL12 118 aa10.99□□□□□ -0.65
MKS1-202ENST00000393119 SPAG8Q99932 426 aaPredicted RBP10.99□□□□□ -0.65
MKS1-202ENST00000393119 TRBV7-9A0A0J9YWB2 115 aa10.99□□□□□ -0.65
MKS1-202ENST00000393119 A6NDN8 102 aa10.99□□□□□ -0.65
MKS1-202ENST00000393119 HSD52Q0P140 79 aa10.99□□□□□ -0.65
MKS1-202ENST00000393119 U3KQK5 164 aa10.99□□□□□ -0.65
MKS1-202ENST00000393119 DUSP14O95147 198 aaKnown RBP10.98□□□□□ -0.65
MKS1-202ENST00000393119 ORMDL3Q8N138 153 aa10.98□□□□□ -0.65
MKS1-202ENST00000393119 OR2K2Q8NGT1 345 aa10.98□□□□□ -0.65
MKS1-202ENST00000393119 SIGLEC8Q9NYZ4 499 aa10.98□□□□□ -0.65
MKS1-202ENST00000393119 H3BUT2 72 aa10.98□□□□□ -0.65
MKS1-202ENST00000393119 LGALS9BQ3B8N2 356 aa10.98□□□□□ -0.65
MKS1-202ENST00000393119 LGALS9CQ6DKI2 356 aa10.98□□□□□ -0.65
MKS1-202ENST00000393119 OR5A1Q8NGJ0 315 aa10.98□□□□□ -0.65
MKS1-202ENST00000393119 XCL2Q9UBD3 114 aa10.98□□□□□ -0.65
MKS1-202ENST00000393119 A0A087WWL8 130 aa10.97□□□□□ -0.65
MKS1-202ENST00000393119 PF4P02776 101 aa10.97□□□□□ -0.65
MKS1-202ENST00000393119 IGHV3-16A0A0C4DH30 117 aa10.97□□□□□ -0.65
MKS1-202ENST00000393119 H0Y8G0 127 aa10.97□□□□□ -0.65
MKS1-202ENST00000393119 NDUFA11Q86Y39 141 aa10.97□□□□□ -0.65
MKS1-202ENST00000393119 PRSS3P2Q8NHM4 247 aa10.97□□□□□ -0.65
MKS1-202ENST00000393119 IGHV1OR15-1A0A075B7D0 117 aa10.96□□□□□ -0.65
MKS1-202ENST00000393119 A0A1W2PPM0 123 aa10.96□□□□□ -0.65
MKS1-202ENST00000393119 IGLV1-51P01701 117 aa10.96□□□□□ -0.65
MKS1-202ENST00000393119 AP1S3Q96PC3 154 aa10.96□□□□□ -0.65
MKS1-202ENST00000393119 ODF3Q96PU9 254 aa10.96□□□□□ -0.65
MKS1-202ENST00000393119 IGHV4-4A0A075B6R2 117 aa10.96□□□□□ -0.66
MKS1-202ENST00000393119 IGHV3OR16-12A0A075B7B8 117 aa10.96□□□□□ -0.66
MKS1-202ENST00000393119 LINC00482Q8N8I6 264 aa10.96□□□□□ -0.66
MKS1-202ENST00000393119 TNFRSF6BO95407 300 aa10.95□□□□□ -0.66
MKS1-202ENST00000393119 MGPP08493 103 aa10.95□□□□□ -0.66
MKS1-202ENST00000393119 TRAV2A0A0B4J234 112 aa10.95□□□□□ -0.66
MKS1-202ENST00000393119 OR11H12B2RN74 326 aa10.95□□□□□ -0.66
MKS1-202ENST00000393119 RPL39LQ96EH5 51 aaKnown RBP10.95□□□□□ -0.66
MKS1-202ENST00000393119 SCGB1A1P11684 91 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms