RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 SDF2Q99470 211 aa0.1□□□□□ -2.39
TRAJ41-201ENST00000390496 SPANXA1Q9NS26 97 aa0.1□□□□□ -2.39
TRAJ41-201ENST00000390496 BDP1A6H8Y1 2624 aa0.1□□□□□ -2.39
TRAJ41-201ENST00000390496 CCDC171Q6TFL3 1326 aa0.1□□□□□ -2.39
TRAJ41-201ENST00000390496 OTOGQ6ZRI0 2925 aa0.1□□□□□ -2.39
TRAJ41-201ENST00000390496 UHRF1BP1LA0JNW5 1464 aa0.1□□□□□ -2.39
TRAJ41-201ENST00000390496 CELSR2Q9HCU4 2923 aa0.09□□□□□ -2.39
TRAJ41-201ENST00000390496 TCRBV3S1A0A5B6 114 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 CLPSL1A2RUU4 121 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 NPFFO15130 113 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 CCL3L1P16619 93 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 S100A7L2Q5SY68 101 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 SPINK6Q6UWN8 80 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 Q6ZUT4 128 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 MMGT1Q8N4V1 131 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 MAGOHBQ96A72 148 aaKnown RBP0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 PROK2Q9HC23 129 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 SPANXCQ9NY87 97 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 BET1LQ9NYM9 111 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 PRG4Q92954 1404 aaPredicted RBP0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 ADGRB1O14514 1584 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 MUC5BQ9HC84 5762 aaPredicted RBP0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 TPRP12270 2363 aaKnown RBP0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 JMJD1CQ15652 2540 aa0.09□□□□□ -2.4
TRAJ41-201ENST00000390496 PATJQ8NI35 1801 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 ZNF236Q9UL36 1845 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 KCPQ6ZWJ8 1503 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 MAST4O15021 2626 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 OVOS2A0A0J9YW53 1432 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 DISP2A7MBM2 1401 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 OVOS2Q6IE36 1432 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 TRAV2A0A0B4J234 112 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 APOC1P02654 83 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 RPS25P62851 125 aaKnown RBP0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 SPCS2Q15005 226 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 CYP2G1PQ6ZSU1 146 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 VMO1Q7Z5L0 202 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 C4orf33Q8N1A6 199 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 VSTM2AQ8TAG5 236 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 COX7B2Q8TF08 81 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 DSCR8Q96T75 97 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 COA4Q9NYJ1 87 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 DOCK2Q92608 1830 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 F8P00451 2351 aa0.08□□□□□ -2.4
TRAJ41-201ENST00000390496 PHLPP1O60346 1717 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 AHCTF1Q8WYP5 2266 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 SOGA1O94964 1423 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 TRGV1A0A0A0MS02 117 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 TRBV7-1A0A0A6YYK4 115 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 J3QR89 54 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 YPEL1O60688 119 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 COX4I1P13073 169 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 C9orf116Q5BN46 136 aaPredicted RBP0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 DPH3Q96FX2 82 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 TPT1P8Q9HAU6 139 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 SAR1AQ9NR31 198 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 TMEM242Q9NWH2 141 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 COPZ2Q9P299 210 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 ERG28Q9UKR5 140 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 PSME4Q14997 1843 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 TTC28Q96AY4 2481 aa0.07□□□□□ -2.4
TRAJ41-201ENST00000390496 IBTKQ9P2D0 1353 aaPredicted RBP0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 BICRAQ9NZM4 1560 aa0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 SIPA1L3O60292 1781 aaPredicted RBP0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 AHNAK2Q8IVF2 5795 aa0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 TRAV12-2A0A075B6T6 113 aa0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 RBAKDNA6NC62 111 aa0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 IL5P05113 134 aa0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 HIST1H1DP16402 221 aaKnown RBP0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 COPZ1P61923 177 aa0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 SSBP1Q04837 148 aaKnown RBP0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 SLC48A1Q6P1K1 146 aa0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 NDUFA11Q86Y39 141 aa0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 SPTSSBQ8NFR3 76 aa0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 VPS25Q9BRG1 176 aa0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 CELSR1Q9NYQ6 3014 aa0.06□□□□□ -2.4
TRAJ41-201ENST00000390496 KDM6BO15054 1643 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 FHAD1B1AJZ9 1412 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 HRNRQ86YZ3 2850 aaPredicted RBP0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 ZMYM4Q5VZL5 1548 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 F2Z2F3 143 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 CCDC179H3BU77 68 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 NDUFA2O43678 99 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 NMBP08949 121 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 ACYP2P14621 99 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 UBE2D1P51668 147 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 SMCO1Q147U7 214 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 SPANXN1Q5VSR9 72 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 Q6ZRX8 168 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 PSMG3Q9BT73 122 aaPredicted RBP0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 PRR15LQ9BU68 103 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 V9GYV3 84 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 ABCA12Q86UK0 2595 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 WNK3Q9BYP7 1800 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 PI4KAP42356 2102 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 ASXL3Q9C0F0 2248 aa0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 LRP1Q07954 4544 aaKnown RBP0.05□□□□□ -2.4
TRAJ41-201ENST00000390496 PRDM2Q13029 1718 aa0.04□□□□□ -2.4
TRAJ41-201ENST00000390496 ARAP2Q8WZ64 1704 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms