RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 KLF5Q13887 457 aaPredicted RBP10.06□□□□□ -0.8
PTPRN2-203ENST00000389418 C16orf74Q96GX8 76 aa10.06□□□□□ -0.8
PTPRN2-203ENST00000389418 CGB3P0DN86 165 aa10.05□□□□□ -0.8
PTPRN2-203ENST00000389418 CGB7P0DN87 165 aa10.05□□□□□ -0.8
PTPRN2-203ENST00000389418 KLF12Q9Y4X4 402 aa10.05□□□□□ -0.8
PTPRN2-203ENST00000389418 U3KQE9 123 aa10.05□□□□□ -0.8
PTPRN2-203ENST00000389418 BPTFQ12830 3046 aa10.05□□□□□ -0.8
PTPRN2-203ENST00000389418 A6NDX4 124 aa10.05□□□□□ -0.8
PTPRN2-203ENST00000389418 PKIGQ9Y2B9 76 aa10.05□□□□□ -0.8
PTPRN2-203ENST00000389418 TRBV12-3P01733 135 aa10.05□□□□□ -0.8
PTPRN2-203ENST00000389418 GAGE6Q13070 117 aa10.05□□□□□ -0.8
PTPRN2-203ENST00000389418 C2orf70A6NJV1 201 aa10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 UBE2V1Q13404 147 aa10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 TRAV8-4A0A0B4J246 113 aa10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 FAM167A-AS1Q96KT0 104 aa10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 IGF2BP2-AS1Q96M15 143 aa10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 LAMTOR3Q9UHA4 124 aa10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 IGHV4OR15-8A0A075B7B6 117 aa10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 A0A087WW49 117 aa10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 SPART-AS1P0CW21 52 aa10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 SNHG12Q9BXW3 62 aa10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 INAFM1C9JVW0 142 aa10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 C4orf3Q8WVX3 66 aa10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 NOP10Q9NPE3 64 aaKnown RBP10.04□□□□□ -0.8
PTPRN2-203ENST00000389418 BOD1L2Q8IYS8 172 aa10.03□□□□□ -0.8
PTPRN2-203ENST00000389418 KIR3DS1Q14943 382 aa10.03□□□□□ -0.8
PTPRN2-203ENST00000389418 CITED2Q99967 270 aaPredicted RBP10.03□□□□□ -0.8
PTPRN2-203ENST00000389418 IGLC2P0DOY2 106 aa10.03□□□□□ -0.8
PTPRN2-203ENST00000389418 IGLC3P0DOY3 106 aa10.03□□□□□ -0.8
PTPRN2-203ENST00000389418 ODF3BA8MYP8 253 aa10.02□□□□□ -0.8
PTPRN2-203ENST00000389418 IGLL1P15814 213 aa10.02□□□□□ -0.8
PTPRN2-203ENST00000389418 SPANXA1Q9NS26 97 aa10.02□□□□□ -0.8
PTPRN2-203ENST00000389418 NDUFA12Q9UI09 145 aa10.02□□□□□ -0.8
PTPRN2-203ENST00000389418 C9orf47Q6ZRZ4 202 aa10.02□□□□□ -0.81
PTPRN2-203ENST00000389418 ANGP03950 147 aaKnown RBP10.02□□□□□ -0.81
PTPRN2-203ENST00000389418 ATP5G1P05496 136 aa10.02□□□□□ -0.81
PTPRN2-203ENST00000389418 MED14OSP0DP75 135 aa10.02□□□□□ -0.81
PTPRN2-203ENST00000389418 BRWD1-AS2P59051 145 aa10.02□□□□□ -0.81
PTPRN2-203ENST00000389418 MRPL23Q16540 153 aaKnown RBP10.02□□□□□ -0.81
PTPRN2-203ENST00000389418 C2orf82Q6UX34 121 aa10.02□□□□□ -0.81
PTPRN2-203ENST00000389418 PIFOQ8TCI5 191 aa10.02□□□□□ -0.81
PTPRN2-203ENST00000389418 CFHR4Q92496 578 aa10.02□□□□□ -0.81
PTPRN2-203ENST00000389418 SIGMAR1Q99720 223 aa10.02□□□□□ -0.81
PTPRN2-203ENST00000389418 VWC2LB2RUY7 222 aa10.02□□□□□ -0.81
PTPRN2-203ENST00000389418 TRBV6-1A0A0K0K1D8 114 aa10.01□□□□□ -0.81
PTPRN2-203ENST00000389418 TRBV20-1A0A075B6N2 111 aa10.01□□□□□ -0.81
PTPRN2-203ENST00000389418 TAL2Q16559 108 aa10.01□□□□□ -0.81
PTPRN2-203ENST00000389418 NKAPP1Q8N9T2 125 aa10.01□□□□□ -0.81
PTPRN2-203ENST00000389418 C11orf1Q9H5F2 150 aa10.01□□□□□ -0.81
PTPRN2-203ENST00000389418 MRPL35Q9NZE8 188 aaKnown RBP10.01□□□□□ -0.81
PTPRN2-203ENST00000389418 WDFY4Q6ZS81 3184 aa10.01□□□□□ -0.81
PTPRN2-203ENST00000389418 UNQ9165/PRO28630Q6UXU0 137 aa10□□□□□ -0.81
PTPRN2-203ENST00000389418 P0C879 139 aa10□□□□□ -0.81
PTPRN2-203ENST00000389418 CDK2AP2O75956 126 aa10□□□□□ -0.81
PTPRN2-203ENST00000389418 C10orf99Q6UWK7 81 aa9.99□□□□□ -0.81
PTPRN2-203ENST00000389418 DAZ2Q13117 558 aaKnown RBP9.99□□□□□ -0.81
PTPRN2-203ENST00000389418 DAZ4Q86SG3 579 aaKnown RBP9.99□□□□□ -0.81
PTPRN2-203ENST00000389418 FANCD2OSQ96PS1 177 aa9.99□□□□□ -0.81
PTPRN2-203ENST00000389418 DAZ3Q9NR90 486 aaKnown RBP9.99□□□□□ -0.81
PTPRN2-203ENST00000389418 CFAP54Q96N23 3096 aa9.99□□□□□ -0.81
PTPRN2-203ENST00000389418 PRAC2D3DTV9 90 aa9.99□□□□□ -0.81
PTPRN2-203ENST00000389418 COX8AP10176 69 aa9.99□□□□□ -0.81
PTPRN2-203ENST00000389418 GATA1P15976 413 aaPredicted RBP9.99□□□□□ -0.81
PTPRN2-203ENST00000389418 IGHG4P01861 327 aa9.99□□□□□ -0.81
PTPRN2-203ENST00000389418 IGF1P05019 195 aa9.98□□□□□ -0.81
PTPRN2-203ENST00000389418 MSRB1Q9NZV6 116 aa9.98□□□□□ -0.81
PTPRN2-203ENST00000389418 C1orf229Q6ZS94 237 aaPredicted RBP9.98□□□□□ -0.81
PTPRN2-203ENST00000389418 Q9HAA7 133 aa9.98□□□□□ -0.81
PTPRN2-203ENST00000389418 J3QQQ9 107 aa9.98□□□□□ -0.81
PTPRN2-203ENST00000389418 PFN2P35080 140 aa9.98□□□□□ -0.81
PTPRN2-203ENST00000389418 ICOSQ9Y6W8 199 aa9.98□□□□□ -0.81
PTPRN2-203ENST00000389418 SIVA1O15304 175 aa9.98□□□□□ -0.81
PTPRN2-203ENST00000389418 NXPH4O95158 308 aa9.97□□□□□ -0.81
PTPRN2-203ENST00000389418 INAFM2P0DMQ5 153 aa9.97□□□□□ -0.81
PTPRN2-203ENST00000389418 KRTAP10-9P60411 292 aa9.97□□□□□ -0.81
PTPRN2-203ENST00000389418 COX11Q9Y6N1 276 aa9.97□□□□□ -0.81
PTPRN2-203ENST00000389418 MAP1AP78559 2803 aaPredicted RBP9.97□□□□□ -0.81
PTPRN2-203ENST00000389418 TRAV13-2A0A0B4J235 113 aa9.97□□□□□ -0.81
PTPRN2-203ENST00000389418 DNAJC9-AS1A6NH13 148 aa9.97□□□□□ -0.81
PTPRN2-203ENST00000389418 DEFB135Q30KP9 77 aa9.97□□□□□ -0.81
PTPRN2-203ENST00000389418 COA6Q5JTJ3 125 aaKnown RBP9.97□□□□□ -0.81
PTPRN2-203ENST00000389418 SETXQ7Z333 2677 aaKnown RBP9.96□□□□□ -0.81
PTPRN2-203ENST00000389418 H3BMM0 161 aa9.96□□□□□ -0.81
PTPRN2-203ENST00000389418 NPSP0C0P6 89 aa9.96□□□□□ -0.81
PTPRN2-203ENST00000389418 CDPF1Q6NVV7 123 aa9.96□□□□□ -0.81
PTPRN2-203ENST00000389418 TMEM61Q8N0U2 210 aa9.96□□□□□ -0.81
PTPRN2-203ENST00000389418 ATP6V0E2Q8NHE4 81 aa9.96□□□□□ -0.81
PTPRN2-203ENST00000389418 SMR3AQ99954 134 aa9.96□□□□□ -0.81
PTPRN2-203ENST00000389418 ZNF747Q9BV97 191 aa9.96□□□□□ -0.81
PTPRN2-203ENST00000389418 NUPR1O60356 82 aa9.96□□□□□ -0.82
PTPRN2-203ENST00000389418 CCL18P55774 89 aa9.96□□□□□ -0.82
PTPRN2-203ENST00000389418 EBI3Q14213 229 aa9.96□□□□□ -0.82
PTPRN2-203ENST00000389418 ADAMTSL5Q6ZMM2 481 aa9.96□□□□□ -0.82
PTPRN2-203ENST00000389418 HERV-K104P63124 156 aa9.96□□□□□ -0.82
PTPRN2-203ENST00000389418 DKK2Q9UBU2 259 aa9.96□□□□□ -0.82
PTPRN2-203ENST00000389418 TRAV8-3A0A0A6YYJ7 113 aa9.95□□□□□ -0.82
PTPRN2-203ENST00000389418 K7EQD1 137 aa9.95□□□□□ -0.82
PTPRN2-203ENST00000389418 Q6YL49 198 aa9.95□□□□□ -0.82
PTPRN2-203ENST00000389418 ZNF295-AS1Q8N0V1 137 aa9.95□□□□□ -0.82
PTPRN2-203ENST00000389418 C1orf43Q9BWL3 253 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms