RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 H0YGX0 51 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 MED14OSP0DP75 135 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 UBE2BP63146 152 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 DAZAP2Q15038 168 aaPredicted RBP12.38□□□□□ -0.43
COL2A1-202ENST00000380518 SH2D6Q7Z4S9 175 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 ACYP1P07311 99 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 SPART-AS1P0CW21 52 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 SND1-IT1Q9HBX3 110 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 NACAE9PAV3 2078 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 C2orf70A6NJV1 201 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 GPHB5Q86YW7 130 aa12.38□□□□□ -0.43
COL2A1-202ENST00000380518 IGHV4OR15-8A0A075B7B6 117 aa12.37□□□□□ -0.43
COL2A1-202ENST00000380518 A0A087WW49 117 aa12.37□□□□□ -0.43
COL2A1-202ENST00000380518 MUSTN1Q8IVN3 82 aa12.37□□□□□ -0.43
COL2A1-202ENST00000380518 TRBV6-1A0A0K0K1D8 114 aa12.37□□□□□ -0.43
COL2A1-202ENST00000380518 E7EUB6 86 aa12.37□□□□□ -0.43
COL2A1-202ENST00000380518 FRMPD3Q5JV73 1810 aa12.37□□□□□ -0.43
COL2A1-202ENST00000380518 hADV29S1A0JD25 119 aa12.37□□□□□ -0.43
COL2A1-202ENST00000380518 Q9HAA7 133 aa12.37□□□□□ -0.43
COL2A1-202ENST00000380518 ZFP36P26651 326 aaKnown RBP12.37□□□□□ -0.43
COL2A1-202ENST00000380518 HIGD1BQ9P298 99 aa12.37□□□□□ -0.43
COL2A1-202ENST00000380518 A0A1W2PNU3 283 aaPredicted RBP12.36□□□□□ -0.43
COL2A1-202ENST00000380518 TMEM89A2RUT3 159 aa12.36□□□□□ -0.43
COL2A1-202ENST00000380518 COX7A2LO14548 114 aa12.36□□□□□ -0.43
COL2A1-202ENST00000380518 HIST2H2BCQ6DN03 193 aa12.36□□□□□ -0.43
COL2A1-202ENST00000380518 ICOSQ9Y6W8 199 aa12.36□□□□□ -0.43
COL2A1-202ENST00000380518 IGHG2P01859 326 aa12.36□□□□□ -0.43
COL2A1-202ENST00000380518 CAMK2N2Q96S95 79 aa12.36□□□□□ -0.43
COL2A1-202ENST00000380518 TIMM17AQ99595 171 aa12.36□□□□□ -0.43
COL2A1-202ENST00000380518 MSMPQ1L6U9 139 aa12.35□□□□□ -0.43
COL2A1-202ENST00000380518 ZNF503Q96F45 646 aa12.35□□□□□ -0.43
COL2A1-202ENST00000380518 RPL39P62891 51 aaKnown RBP12.35□□□□□ -0.43
COL2A1-202ENST00000380518 CITED1Q99966 193 aa12.35□□□□□ -0.43
COL2A1-202ENST00000380518 KMT2EQ8IZD2 1858 aa12.35□□□□□ -0.43
COL2A1-202ENST00000380518 C11orf1Q9H5F2 150 aa12.35□□□□□ -0.43
COL2A1-202ENST00000380518 HIVEP2P31629 2446 aa12.35□□□□□ -0.43
COL2A1-202ENST00000380518 FBXL19-AS1Q494R0 122 aa12.35□□□□□ -0.43
COL2A1-202ENST00000380518 MYO18BQ8IUG5 2567 aa12.34□□□□□ -0.43
COL2A1-202ENST00000380518 TRBV7-3A0A075B6L6 115 aa12.34□□□□□ -0.43
COL2A1-202ENST00000380518 TOMM6Q96B49 74 aa12.34□□□□□ -0.43
COL2A1-202ENST00000380518 IGLV10-54A0A075B6I4 117 aa12.34□□□□□ -0.43
COL2A1-202ENST00000380518 COX7B2Q8TF08 81 aa12.34□□□□□ -0.43
COL2A1-202ENST00000380518 RS1O15537 224 aa12.33□□□□□ -0.44
COL2A1-202ENST00000380518 FXYD2P54710 66 aa12.33□□□□□ -0.44
COL2A1-202ENST00000380518 FREM1Q5H8C1 2179 aa12.33□□□□□ -0.44
COL2A1-202ENST00000380518 ETDCA0A1B0GVM5 59 aa12.33□□□□□ -0.44
COL2A1-202ENST00000380518 FANCD2OSQ96PS1 177 aa12.33□□□□□ -0.44
COL2A1-202ENST00000380518 SIRPDQ9H106 197 aa12.33□□□□□ -0.44
COL2A1-202ENST00000380518 E9PLD3 99 aa12.33□□□□□ -0.44
COL2A1-202ENST00000380518 BAALCQ8WXS3 180 aa12.33□□□□□ -0.44
COL2A1-202ENST00000380518 TTTY13Q9BZ97 58 aa12.33□□□□□ -0.44
COL2A1-202ENST00000380518 C19orf71A6NCJ1 209 aa12.32□□□□□ -0.44
COL2A1-202ENST00000380518 DEFB105AQ8NG35 78 aa12.32□□□□□ -0.44
COL2A1-202ENST00000380518 OPRPNQ99935 248 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-202ENST00000380518 P0C879 139 aa12.32□□□□□ -0.44
COL2A1-202ENST00000380518 FUSP35637 526 aaKnown RBP eCLIP12.32□□□□□ -0.44
COL2A1-202ENST00000380518 MRAPQ8TCY5 172 aa12.32□□□□□ -0.44
COL2A1-202ENST00000380518 PKIGQ9Y2B9 76 aa12.32□□□□□ -0.44
COL2A1-202ENST00000380518 LINC01620Q4KN68 170 aa12.31□□□□□ -0.44
COL2A1-202ENST00000380518 TEN1Q86WV5 123 aa12.31□□□□□ -0.44
COL2A1-202ENST00000380518 SPANXCQ9NY87 97 aa12.31□□□□□ -0.44
COL2A1-202ENST00000380518 NCKAP5O14513 1909 aa12.3□□□□□ -0.44
COL2A1-202ENST00000380518 FRMD6-AS1P0C7T7 363 aa12.3□□□□□ -0.44
COL2A1-202ENST00000380518 CCL18P55774 89 aa12.3□□□□□ -0.44
COL2A1-202ENST00000380518 NRGNQ92686 78 aa12.3□□□□□ -0.44
COL2A1-202ENST00000380518 RPL18AQ02543 176 aaKnown RBP12.29□□□□□ -0.44
COL2A1-202ENST00000380518 ODF1Q14990 250 aa12.29□□□□□ -0.44
COL2A1-202ENST00000380518 VSIG2Q96IQ7 327 aa12.29□□□□□ -0.44
COL2A1-202ENST00000380518 C11orf86A6NJI1 115 aa12.29□□□□□ -0.44
COL2A1-202ENST00000380518 IGKV1D-37A0A075B6S9 117 aa12.29□□□□□ -0.44
COL2A1-202ENST00000380518 MYCNOSP40205 109 aa12.29□□□□□ -0.44
COL2A1-202ENST00000380518 HHLA3Q9XRX5 114 aa12.29□□□□□ -0.44
COL2A1-202ENST00000380518 DEFB1P60022 68 aa12.29□□□□□ -0.44
COL2A1-202ENST00000380518 IGHV4-4A0A075B6R2 117 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 A0A0J9YX75 114 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 WISP2O76076 250 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 UNQ9165/PRO28630Q6UXU0 137 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 PRB1P04280 392 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 IGHV3-30P01768 117 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 IGHV3-33P01772 117 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 IGHV3-30-3P0DP02 117 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 IGHV3-30-5P0DP03 117 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 LINC00574Q9H8X3 128 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 NCOA6Q14686 2063 aaPredicted RBP12.28□□□□□ -0.44
COL2A1-202ENST00000380518 PTPN13Q12923 2485 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 PLXNB3Q9ULL4 1909 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 TECTAO75443 2155 aa12.28□□□□□ -0.44
COL2A1-202ENST00000380518 PROP1O75360 226 aa12.27□□□□□ -0.44
COL2A1-202ENST00000380518 C20orf203Q8NBC4 194 aa12.27□□□□□ -0.45
COL2A1-202ENST00000380518 TMEM61Q8N0U2 210 aa12.27□□□□□ -0.45
COL2A1-202ENST00000380518 ESM1Q9NQ30 184 aa12.27□□□□□ -0.45
COL2A1-202ENST00000380518 RBM3P98179 157 aaKnown RBP12.27□□□□□ -0.45
COL2A1-202ENST00000380518 DAND5Q8N907 189 aa12.27□□□□□ -0.45
COL2A1-202ENST00000380518 TAX1BP3O14907 124 aa12.26□□□□□ -0.45
COL2A1-202ENST00000380518 A6NDX4 124 aa12.26□□□□□ -0.45
COL2A1-202ENST00000380518 NDUFA1O15239 70 aa12.26□□□□□ -0.45
COL2A1-202ENST00000380518 C4orf3Q8WVX3 66 aa12.26□□□□□ -0.45
COL2A1-202ENST00000380518 CXCL5P42830 114 aa12.26□□□□□ -0.45
COL2A1-202ENST00000380518 WFDC2Q14508 124 aa12.26□□□□□ -0.45
COL2A1-202ENST00000380518 MDFICQ9P1T7 246 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms