RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 HERVK_113P61574 105 aa13.52□□□□□ -0.24
TDP2-202ENST00000378198 SPTBN4Q9H254 2564 aa13.52□□□□□ -0.25
TDP2-202ENST00000378198 J3QLI3 93 aa13.52□□□□□ -0.25
TDP2-202ENST00000378198 RRN3P1Q2M238 152 aa13.52□□□□□ -0.25
TDP2-202ENST00000378198 SPTAN1Q13813 2472 aaKnown RBP13.52□□□□□ -0.25
TDP2-202ENST00000378198 C11orf86A6NJI1 115 aa13.51□□□□□ -0.25
TDP2-202ENST00000378198 F8W1H4 67 aa13.51□□□□□ -0.25
TDP2-202ENST00000378198 MDFICQ9P1T7 246 aa13.51□□□□□ -0.25
TDP2-202ENST00000378198 TRAV12-2A0A075B6T6 113 aa13.51□□□□□ -0.25
TDP2-202ENST00000378198 IGHV1OR15-1A0A075B7D0 117 aa13.51□□□□□ -0.25
TDP2-202ENST00000378198 HOXA3O43365 443 aaPredicted RBP13.51□□□□□ -0.25
TDP2-202ENST00000378198 CD300EQ496F6 205 aaPredicted RBP13.51□□□□□ -0.25
TDP2-202ENST00000378198 FAM74A4Q5TZK3 123 aa13.51□□□□□ -0.25
TDP2-202ENST00000378198 SCGB1D4Q6XE38 83 aa13.51□□□□□ -0.25
TDP2-202ENST00000378198 Q8N1Y9 231 aa13.51□□□□□ -0.25
TDP2-202ENST00000378198 IGKV3-20P01619 116 aa13.5□□□□□ -0.25
TDP2-202ENST00000378198 RPL39P62891 51 aaKnown RBP13.5□□□□□ -0.25
TDP2-202ENST00000378198 TMEM238LA0A1B0GVL6 79 aa13.49□□□□□ -0.25
TDP2-202ENST00000378198 A6NJY4 79 aa13.49□□□□□ -0.25
TDP2-202ENST00000378198 ZNF56Q15929 161 aa13.49□□□□□ -0.25
TDP2-202ENST00000378198 M0QY20 66 aa13.49□□□□□ -0.25
TDP2-202ENST00000378198 ELANEP08246 267 aa13.49□□□□□ -0.25
TDP2-202ENST00000378198 SYNJ2BPP57105 145 aa13.49□□□□□ -0.25
TDP2-202ENST00000378198 RPL24P83731 157 aaKnown RBP13.49□□□□□ -0.25
TDP2-202ENST00000378198 SPINK13Q1W4C9 94 aa13.48□□□□□ -0.25
TDP2-202ENST00000378198 TRPT1Q86TN4 253 aaKnown RBP13.48□□□□□ -0.25
TDP2-202ENST00000378198 RNF152Q8N8N0 203 aa13.48□□□□□ -0.25
TDP2-202ENST00000378198 NRGNQ92686 78 aa13.48□□□□□ -0.25
TDP2-202ENST00000378198 PLEKHB2Q96CS7 222 aa13.48□□□□□ -0.25
TDP2-202ENST00000378198 SRSF9Q13242 221 aaKnown RBP eCLIP13.48□□□□□ -0.25
TDP2-202ENST00000378198 RHOHQ15669 191 aa13.48□□□□□ -0.25
TDP2-202ENST00000378198 MORN3Q6PF18 240 aaPredicted RBP13.48□□□□□ -0.25
TDP2-202ENST00000378198 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.47□□□□□ -0.255e-7■■■□□ 17.1
TDP2-202ENST00000378198 NSUN5P1Q3KNT7 163 aa13.47□□□□□ -0.25
TDP2-202ENST00000378198 ZNF876PQ49A33 203 aa13.47□□□□□ -0.25
TDP2-202ENST00000378198 KLHL30-AS1Q8NEE0 82 aa13.47□□□□□ -0.25
TDP2-202ENST00000378198 DEFB104AQ8WTQ1 72 aa13.47□□□□□ -0.25
TDP2-202ENST00000378198 ZNF256Q9Y2P7 627 aaPredicted RBP13.47□□□□□ -0.25
TDP2-202ENST00000378198 NCOR2Q9Y618 2525 aa13.47□□□□□ -0.25
TDP2-202ENST00000378198 A0A096LNT2 108 aa13.46□□□□□ -0.25
TDP2-202ENST00000378198 TGFAP01135 160 aa13.46□□□□□ -0.25
TDP2-202ENST00000378198 UBE2E2Q96LR5 201 aa13.46□□□□□ -0.25
TDP2-202ENST00000378198 VPREB3Q9UKI3 123 aa13.46□□□□□ -0.25
TDP2-202ENST00000378198 CELSR1Q9NYQ6 3014 aa13.46□□□□□ -0.26
TDP2-202ENST00000378198 TRGV11A0A075B6L2 103 aa13.46□□□□□ -0.26
TDP2-202ENST00000378198 EMP1P54849 157 aa13.46□□□□□ -0.26
TDP2-202ENST00000378198 ITPR1Q14643 2758 aa13.45□□□□□ -0.26
TDP2-202ENST00000378198 TEX48A0A1B0GUV7 120 aa13.45□□□□□ -0.26
TDP2-202ENST00000378198 H3BMG7 143 aa13.45□□□□□ -0.26
TDP2-202ENST00000378198 HOXD3P31249 432 aaPredicted RBP13.44□□□□□ -0.26
TDP2-202ENST00000378198 TMEM170BQ5T4T1 132 aa13.44□□□□□ -0.26
TDP2-202ENST00000378198 A0A0J9YY99 117 aa13.44□□□□□ -0.26
TDP2-202ENST00000378198 UBE2D1P51668 147 aa13.44□□□□□ -0.26
TDP2-202ENST00000378198 AMTNQ6UX39 209 aa13.44□□□□□ -0.26
TDP2-202ENST00000378198 Q6YL49 198 aa13.44□□□□□ -0.26
TDP2-202ENST00000378198 SPANXB1Q9NS25 103 aaPredicted RBP13.44□□□□□ -0.26
TDP2-202ENST00000378198 WFDC2Q14508 124 aa13.43□□□□□ -0.26
TDP2-202ENST00000378198 ZNRF2Q8NHG8 242 aa13.43□□□□□ -0.26
TDP2-202ENST00000378198 ZNF702PQ9H963 129 aa13.43□□□□□ -0.26
TDP2-202ENST00000378198 PGPEP1Q9NXJ5 209 aa13.43□□□□□ -0.26
TDP2-202ENST00000378198 CHD8Q9HCK8 2581 aa13.43□□□□□ -0.26
TDP2-202ENST00000378198 GAGE13Q4V321 117 aa13.43□□□□□ -0.26
TDP2-202ENST00000378198 NFE4Q86UQ8 179 aa13.43□□□□□ -0.26
TDP2-202ENST00000378198 I3L3M4 83 aa13.42□□□□□ -0.26
TDP2-202ENST00000378198 DUX5Q96PT3 197 aa13.42□□□□□ -0.26
TDP2-202ENST00000378198 MRPL16Q9NX20 251 aaKnown RBP13.42□□□□□ -0.26
TDP2-202ENST00000378198 P0DMU3 169 aa13.41□□□□□ -0.26
TDP2-202ENST00000378198 FAM231AP0DMU4 169 aa13.41□□□□□ -0.26
TDP2-202ENST00000378198 FAM231CP0DMU5 169 aa13.41□□□□□ -0.26
TDP2-202ENST00000378198 FSHBP01225 129 aa13.41□□□□□ -0.26
TDP2-202ENST00000378198 C20orf203Q8NBC4 194 aa13.41□□□□□ -0.26
TDP2-202ENST00000378198 J3QR89 54 aa13.4□□□□□ -0.26
TDP2-202ENST00000378198 TCTEX1D4Q5JR98 221 aa13.4□□□□□ -0.26
TDP2-202ENST00000378198 VPS13CQ709C8 3753 aa13.4□□□□□ -0.26
TDP2-202ENST00000378198 J3QQQ9 107 aa13.4□□□□□ -0.27
TDP2-202ENST00000378198 TSPEAR-AS2P59090 65 aa13.4□□□□□ -0.27
TDP2-202ENST00000378198 SLC25A29Q8N8R3 303 aa13.4□□□□□ -0.27
TDP2-202ENST00000378198 EDA2RQ9HAV5 297 aa13.4□□□□□ -0.27
TDP2-202ENST00000378198 PRO0461Q9UI25 63 aa13.4□□□□□ -0.27
TDP2-202ENST00000378198 LGALS3P17931 250 aaKnown RBP13.39□□□□□ -0.27
TDP2-202ENST00000378198 MAPK1IP1LQ8NDC0 245 aa13.39□□□□□ -0.27
TDP2-202ENST00000378198 LEPROTO15243 131 aa13.38□□□□□ -0.27
TDP2-202ENST00000378198 IGHV3-30P01768 117 aa13.38□□□□□ -0.27
TDP2-202ENST00000378198 IGHV3-30-5P0DP03 117 aa13.38□□□□□ -0.27
TDP2-202ENST00000378198 OPRPNQ99935 248 aaPredicted RBP13.38□□□□□ -0.27
TDP2-202ENST00000378198 TMEM223A0PJW6 202 aa13.37□□□□□ -0.27
TDP2-202ENST00000378198 A8MTW9 85 aa13.37□□□□□ -0.27
TDP2-202ENST00000378198 TSPAN13O95857 204 aa13.37□□□□□ -0.27
TDP2-202ENST00000378198 DLX4Q92988 240 aaPredicted RBP13.37□□□□□ -0.27
TDP2-202ENST00000378198 AMELXQ99217 191 aa13.37□□□□□ -0.27
TDP2-202ENST00000378198 APOMO95445 188 aa13.36□□□□□ -0.27
TDP2-202ENST00000378198 RBMY1A1P0DJD3 496 aaKnown RBP13.36□□□□□ -0.27
TDP2-202ENST00000378198 RBMY1CP0DJD4 496 aa13.36□□□□□ -0.27
TDP2-202ENST00000378198 RBMY1FQ15415 496 aaKnown RBP13.36□□□□□ -0.27
TDP2-202ENST00000378198 ETDBQ3ZM63 59 aa13.36□□□□□ -0.27
TDP2-202ENST00000378198 NDUFA11Q86Y39 141 aa13.36□□□□□ -0.27
TDP2-202ENST00000378198 KNCNA6PVL3 124 aa13.36□□□□□ -0.27
TDP2-202ENST00000378198 LYRM7Q5U5X0 104 aa13.36□□□□□ -0.27
TDP2-202ENST00000378198 TRAV2A0A0B4J234 112 aa13.35□□□□□ -0.27
TDP2-202ENST00000378198 IGHV4-31P0DP07 118 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms