RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SH2D6Q7Z4S9 175 aa9.2□□□□□ -0.94
CKAP2-202ENST00000378034 C15orf54Q8N8G6 183 aa9.2□□□□□ -0.94
CKAP2-202ENST00000378034 ISOC2Q96AB3 205 aa9.2□□□□□ -0.94
CKAP2-202ENST00000378034 PRADC1Q9BSG0 188 aa9.2□□□□□ -0.94
CKAP2-202ENST00000378034 TPPP3Q9BW30 176 aa9.2□□□□□ -0.94
CKAP2-202ENST00000378034 ALMS1Q8TCU4 4167 aa9.19□□□□□ -0.94
CKAP2-202ENST00000378034 IGHV3-73A0A0B4J1V6 119 aa9.19□□□□□ -0.94
CKAP2-202ENST00000378034 CRYGDP07320 174 aa9.19□□□□□ -0.94
CKAP2-202ENST00000378034 GYPEP15421 78 aa9.19□□□□□ -0.94
CKAP2-202ENST00000378034 CTRLP40313 264 aa9.19□□□□□ -0.94
CKAP2-202ENST00000378034 UQCC3Q6UW78 93 aa9.19□□□□□ -0.94
CKAP2-202ENST00000378034 SLC25A29Q8N8R3 303 aa9.19□□□□□ -0.94
CKAP2-202ENST00000378034 SAMD10Q9BYL1 202 aa9.19□□□□□ -0.94
CKAP2-202ENST00000378034 TMA7Q9Y2S6 64 aaKnown RBP9.19□□□□□ -0.94
CKAP2-202ENST00000378034 K7EQD1 137 aa9.19□□□□□ -0.94
CKAP2-202ENST00000378034 ADIRFQ15847 76 aa9.19□□□□□ -0.94
CKAP2-202ENST00000378034 LYZL1Q6UWQ5 148 aa9.19□□□□□ -0.94
CKAP2-202ENST00000378034 CNFNQ9BYD5 112 aa9.19□□□□□ -0.94
CKAP2-202ENST00000378034 FAM231BA6NCW3 169 aa9.18□□□□□ -0.94
CKAP2-202ENST00000378034 SCO1O75880 301 aa9.18□□□□□ -0.94
CKAP2-202ENST00000378034 SRIP30626 198 aa9.18□□□□□ -0.94
CKAP2-202ENST00000378034 FOXA3P55318 350 aaPredicted RBP9.18□□□□□ -0.94
CKAP2-202ENST00000378034 FAM74A4Q5TZK3 123 aa9.18□□□□□ -0.94
CKAP2-202ENST00000378034 NEGR1Q7Z3B1 354 aa9.18□□□□□ -0.94
CKAP2-202ENST00000378034 AP1S3Q96PC3 154 aa9.18□□□□□ -0.94
CKAP2-202ENST00000378034 GFRA4Q9GZZ7 299 aa9.18□□□□□ -0.94
CKAP2-202ENST00000378034 A0A087WWL8 130 aa9.17□□□□□ -0.94
CKAP2-202ENST00000378034 MUC21A0A0G2JKD1 596 aa9.17□□□□□ -0.94
CKAP2-202ENST00000378034 MUC21A0A140T8X8 626 aa9.17□□□□□ -0.94
CKAP2-202ENST00000378034 TSKUQ8WUA8 353 aa9.17□□□□□ -0.94
CKAP2-202ENST00000378034 SMIM17P0DL12 118 aa9.17□□□□□ -0.94
CKAP2-202ENST00000378034 ESRGQ1W209 222 aa9.17□□□□□ -0.94
CKAP2-202ENST00000378034 Q6ZSN1 163 aa9.17□□□□□ -0.94
CKAP2-202ENST00000378034 GTSF1Q8WW33 167 aa9.17□□□□□ -0.94
CKAP2-202ENST00000378034 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
CKAP2-202ENST00000378034 TRGC1P0CF51 173 aa9.16□□□□□ -0.94
CKAP2-202ENST00000378034 RAB4BP61018 213 aa9.16□□□□□ -0.94
CKAP2-202ENST00000378034 OR10G8Q8NGN5 311 aa9.16□□□□□ -0.94
CKAP2-202ENST00000378034 V9GYV3 84 aa9.16□□□□□ -0.94
CKAP2-202ENST00000378034 NTF3P20783 257 aa9.15□□□□□ -0.94
CKAP2-202ENST00000378034 SSTP61278 116 aa9.15□□□□□ -0.94
CKAP2-202ENST00000378034 PNRC1Q12796 327 aaPredicted RBP9.15□□□□□ -0.94
CKAP2-202ENST00000378034 C14orf178Q8N769 122 aaPredicted RBP9.15□□□□□ -0.94
CKAP2-202ENST00000378034 UPK3BQ9BT76 320 aa9.15□□□□□ -0.94
CKAP2-202ENST00000378034 MRPS16Q9Y3D3 137 aaKnown RBP9.15□□□□□ -0.94
CKAP2-202ENST00000378034 KIF25-AS1Q9Y6Z4 181 aa9.15□□□□□ -0.94
CKAP2-202ENST00000378034 TRBV10-1A0A0K0K1A3 114 aa9.15□□□□□ -0.95
CKAP2-202ENST00000378034 LYPD5Q6UWN5 251 aa9.15□□□□□ -0.95
CKAP2-202ENST00000378034 LOC100131303A0A0U1RQF7 123 aa9.14□□□□□ -0.95
CKAP2-202ENST00000378034 TIRAPP58753 221 aa9.14□□□□□ -0.95
CKAP2-202ENST00000378034 BORCS7Q96B45 105 aa9.14□□□□□ -0.95
CKAP2-202ENST00000378034 MSRB1Q9NZV6 116 aa9.14□□□□□ -0.95
CKAP2-202ENST00000378034 DNAH1Q9P2D7 4330 aa9.14□□□□□ -0.95
CKAP2-202ENST00000378034 TWIST1Q15672 202 aa9.13□□□□□ -0.95
CKAP2-202ENST00000378034 ZNF56Q15929 161 aa9.13□□□□□ -0.95
CKAP2-202ENST00000378034 ZNRF2Q8NHG8 242 aa9.13□□□□□ -0.95
CKAP2-202ENST00000378034 PGLYRP4Q96LB8 373 aa9.13□□□□□ -0.95
CKAP2-202ENST00000378034 SACSQ9NZJ4 4579 aa9.13□□□□□ -0.95
CKAP2-202ENST00000378034 HIGD1CA8MV81 97 aa9.13□□□□□ -0.95
CKAP2-202ENST00000378034 DPH3P1Q9H4G8 78 aa9.13□□□□□ -0.95
CKAP2-202ENST00000378034 TMEM218A2RU14 115 aa9.12□□□□□ -0.95
CKAP2-202ENST00000378034 F5H697 171 aa9.12□□□□□ -0.95
CKAP2-202ENST00000378034 PPP1R2P9O14990 202 aa9.12□□□□□ -0.95
CKAP2-202ENST00000378034 LINC00694P0DN24 101 aa9.12□□□□□ -0.95
CKAP2-202ENST00000378034 LINC00315P59091 139 aa9.12□□□□□ -0.95
CKAP2-202ENST00000378034 SMIM15Q7Z3B0 74 aa9.12□□□□□ -0.95
CKAP2-202ENST00000378034 NAT8BQ9UHF3 227 aa9.12□□□□□ -0.95
CKAP2-202ENST00000378034 A0A1B0GUT8 65 aa9.12□□□□□ -0.95
CKAP2-202ENST00000378034 EVI2AP22794 236 aa9.12□□□□□ -0.95
CKAP2-202ENST00000378034 ATP6V0E2Q8NHE4 81 aa9.12□□□□□ -0.95
CKAP2-202ENST00000378034 SMIM27A0A1W2PRY6 76 aa9.11□□□□□ -0.95
CKAP2-202ENST00000378034 GAGE12JA6NER3 117 aa9.11□□□□□ -0.95
CKAP2-202ENST00000378034 H7C1H1 209 aa9.11□□□□□ -0.95
CKAP2-202ENST00000378034 RPL36AP83881 106 aaKnown RBP9.11□□□□□ -0.95
CKAP2-202ENST00000378034 GAGE1Q13065 139 aa9.11□□□□□ -0.95
CKAP2-202ENST00000378034 GAGE4Q13068 117 aa9.11□□□□□ -0.95
CKAP2-202ENST00000378034 GAGE5Q13069 117 aa9.11□□□□□ -0.95
CKAP2-202ENST00000378034 GAGE13Q4V321 117 aa9.11□□□□□ -0.95
CKAP2-202ENST00000378034 RPL36ALQ969Q0 106 aaKnown RBP9.11□□□□□ -0.95
CKAP2-202ENST00000378034 Q9H8V8 135 aa9.11□□□□□ -0.95
CKAP2-202ENST00000378034 VPS13DQ5THJ4 4388 aa9.11□□□□□ -0.95
CKAP2-202ENST00000378034 LOC105371267A0A1B0GV96 52 aa9.1□□□□□ -0.95
CKAP2-202ENST00000378034 APOC3P02656 99 aa9.1□□□□□ -0.95
CKAP2-202ENST00000378034 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.1□□□□□ -0.95
CKAP2-202ENST00000378034 GTSF1LQ9H1H1 148 aa9.1□□□□□ -0.95
CKAP2-202ENST00000378034 RYR2Q92736 4967 aa9.1□□□□□ -0.95
CKAP2-202ENST00000378034 TRBV7-3A0A075B6L6 115 aa9.1□□□□□ -0.95
CKAP2-202ENST00000378034 F8W036 122 aa9.1□□□□□ -0.95
CKAP2-202ENST00000378034 MT-ND4LP03901 98 aa9.1□□□□□ -0.95
CKAP2-202ENST00000378034 MGPP08493 103 aa9.1□□□□□ -0.95
CKAP2-202ENST00000378034 RIGQ13278 110 aa9.1□□□□□ -0.95
CKAP2-202ENST00000378034 NUP35Q8NFH5 326 aa9.1□□□□□ -0.95
CKAP2-202ENST00000378034 ANAPC16Q96DE5 110 aa9.1□□□□□ -0.95
CKAP2-202ENST00000378034 SEC11CQ9BY50 192 aa9.1□□□□□ -0.95
CKAP2-202ENST00000378034 Q9UF83 564 aa9.09□□□□□ -0.95
CKAP2-202ENST00000378034 SIVA1O15304 175 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 ADCYAP1P18509 176 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 Q6ZR54 194 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 NEXN-AS1Q8NBZ9 246 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 DNAJC30Q96LL9 226 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms