RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 GATA1P15976 413 aaPredicted RBP15.06■□□□□ 0
PCDH8-202ENST00000377942 SMAD5-AS1Q9Y6J3 95 aa15.06■□□□□ 0
PCDH8-202ENST00000377942 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.05■□□□□ 0
PCDH8-202ENST00000377942 IGKV2-29A2NJV5 120 aaPredicted RBP15.05■□□□□ 0
PCDH8-202ENST00000377942 ZNF503Q96F45 646 aa15.05■□□□□ 0
PCDH8-202ENST00000377942 MSRB1Q9NZV6 116 aa15.05■□□□□ 0
PCDH8-202ENST00000377942 LRP4O75096 1905 aa15.05■□□□□ -0
PCDH8-202ENST00000377942 LINC01548A6NM66 108 aa15.05■□□□□ -0
PCDH8-202ENST00000377942 SPRY2O43597 315 aa15.05■□□□□ -0
PCDH8-202ENST00000377942 NXPH4O95158 308 aa15.04■□□□□ -0
PCDH8-202ENST00000377942 CCL18P55774 89 aa15.04■□□□□ -0
PCDH8-202ENST00000377942 RPL39LQ96EH5 51 aaKnown RBP15.04■□□□□ -0
PCDH8-202ENST00000377942 DKK2Q9UBU2 259 aa15.04■□□□□ -0
PCDH8-202ENST00000377942 A0A1B0GV72 72 aa15.04■□□□□ -0
PCDH8-202ENST00000377942 SPINK8P0C7L1 97 aa15.04■□□□□ -0
PCDH8-202ENST00000377942 PKIGQ9Y2B9 76 aa15.04■□□□□ -0
PCDH8-202ENST00000377942 C1orf43Q9BWL3 253 aa15.04■□□□□ -0
PCDH8-202ENST00000377942 NAV3Q8IVL0 2385 aa15.04■□□□□ -0
PCDH8-202ENST00000377942 UBE2V1Q13404 147 aa15.04■□□□□ -0
PCDH8-202ENST00000377942 C1orf229Q6ZS94 237 aaPredicted RBP15.04■□□□□ -0
PCDH8-202ENST00000377942 IGKV2D-24A0A075B6R9 120 aa15.03■□□□□ -0
PCDH8-202ENST00000377942 TRAV13-2A0A0B4J235 113 aa15.03■□□□□ -0
PCDH8-202ENST00000377942 GTSF1Q8WW33 167 aa15.03■□□□□ -0
PCDH8-202ENST00000377942 ZFP2Q6ZN57 461 aa15.03■□□□□ -0
PCDH8-202ENST00000377942 H3BMM0 161 aa15.02■□□□□ -0
PCDH8-202ENST00000377942 RNASE13Q5GAN3 156 aaKnown RBP15.02■□□□□ -0
PCDH8-202ENST00000377942 UBE2WQ96B02 151 aa15.02■□□□□ -0
PCDH8-202ENST00000377942 XCL1P47992 114 aa15.02■□□□□ -0
PCDH8-202ENST00000377942 SLC25A29Q8N8R3 303 aa15.02■□□□□ -0
PCDH8-202ENST00000377942 ODF3Q96PU9 254 aa15.02■□□□□ -0
PCDH8-202ENST00000377942 HERV-K104P63124 156 aa15.02□□□□□ -0.01
PCDH8-202ENST00000377942 MAP6D1Q9H9H5 199 aa15.02□□□□□ -0.01
PCDH8-202ENST00000377942 C9JAW5 83 aa15.01□□□□□ -0.01
PCDH8-202ENST00000377942 CLPSL2Q6UWE3 100 aa15.01□□□□□ -0.01
PCDH8-202ENST00000377942 COX11Q9Y6N1 276 aa15.01□□□□□ -0.01
PCDH8-202ENST00000377942 CDK2AP2O75956 126 aa15.01□□□□□ -0.01
PCDH8-202ENST00000377942 CRLF1O75462 422 aa15.01□□□□□ -0.01
PCDH8-202ENST00000377942 Q6ZQT7 251 aa15.01□□□□□ -0.01
PCDH8-202ENST00000377942 TRBV7-3A0A075B6L6 115 aa15.01□□□□□ -0.01
PCDH8-202ENST00000377942 TMEM263Q8WUH6 116 aaKnown RBP15□□□□□ -0.01
PCDH8-202ENST00000377942 SIGMAR1Q99720 223 aa15□□□□□ -0.01
PCDH8-202ENST00000377942 CCDC168Q8NDH2 2452 aa15□□□□□ -0.01
PCDH8-202ENST00000377942 C19orf71A6NCJ1 209 aa15□□□□□ -0.01
PCDH8-202ENST00000377942 PRO1854Q9UHT4 67 aa15□□□□□ -0.01
PCDH8-202ENST00000377942 SNHG12Q9BXW3 62 aa14.99□□□□□ -0.01
PCDH8-202ENST00000377942 HHLA3Q9XRX5 114 aa14.99□□□□□ -0.01
PCDH8-202ENST00000377942 DEFB135Q30KP9 77 aa14.99□□□□□ -0.01
PCDH8-202ENST00000377942 INAFM2P0DMQ5 153 aa14.98□□□□□ -0.01
PCDH8-202ENST00000377942 CEND1Q8N111 149 aa14.97□□□□□ -0.01
PCDH8-202ENST00000377942 COL5A1P20908 1838 aaPredicted RBP14.97□□□□□ -0.01
PCDH8-202ENST00000377942 C9orf118A6NHY6 69 aa14.97□□□□□ -0.01
PCDH8-202ENST00000377942 PRSS47A8MTI9 375 aa14.97□□□□□ -0.01
PCDH8-202ENST00000377942 K7EQG2 157 aa14.97□□□□□ -0.01
PCDH8-202ENST00000377942 ZNF295-AS1Q8N0V1 137 aa14.97□□□□□ -0.01
PCDH8-202ENST00000377942 Q6ZSV7 163 aa14.97□□□□□ -0.01
PCDH8-202ENST00000377942 TLN1Q9Y490 2541 aaKnown RBP14.97□□□□□ -0.01
PCDH8-202ENST00000377942 TNRC6AQ8NDV7 1962 aaKnown RBP14.96□□□□□ -0.01
PCDH8-202ENST00000377942 DEFB1P60022 68 aa14.96□□□□□ -0.01
PCDH8-202ENST00000377942 TRBV10-1A0A0K0K1A3 114 aa14.96□□□□□ -0.02
PCDH8-202ENST00000377942 ARHGAP21Q5T5U3 1957 aa14.95□□□□□ -0.02
PCDH8-202ENST00000377942 Q9H8V8 135 aa14.95□□□□□ -0.02
PCDH8-202ENST00000377942 INAFM1C9JVW0 142 aa14.95□□□□□ -0.02
PCDH8-202ENST00000377942 DEFB114Q30KQ6 69 aa14.95□□□□□ -0.02
PCDH8-202ENST00000377942 TNCP24821 2201 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 BVES-AS1Q5T3Y7 98 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 SCRT2Q9NQ03 307 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 FGF6P10767 208 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 GAGE2BQ13066 116 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 GAGE2EQ4V326 116 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 AMTNQ6UX39 209 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 C5orf38Q86SI9 138 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 Q8N6K4 173 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 Q9HAA7 133 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 GAGE2DQ9UEU5 116 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 LINC01545Q5VT33 79 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 TIMM17AQ99595 171 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 TMEM126AQ9H061 195 aa14.94□□□□□ -0.02
PCDH8-202ENST00000377942 PSMG3-AS1Q96PY0 264 aa14.93□□□□□ -0.02
PCDH8-202ENST00000377942 SOCS3O14543 225 aa14.93□□□□□ -0.02
PCDH8-202ENST00000377942 COX7A2LO14548 114 aa14.93□□□□□ -0.02
PCDH8-202ENST00000377942 PRO0255Q9UI72 69 aa14.93□□□□□ -0.02
PCDH8-202ENST00000377942 IFITM1P13164 125 aa14.93□□□□□ -0.02
PCDH8-202ENST00000377942 TRAV12-1A0A0B4J245 112 aa14.93□□□□□ -0.02
PCDH8-202ENST00000377942 TRAV4A0A0B4J268 109 aa14.93□□□□□ -0.02
PCDH8-202ENST00000377942 PIEZO2Q9H5I5 2752 aa14.92□□□□□ -0.02
PCDH8-202ENST00000377942 WNK1Q9H4A3 2382 aa14.92□□□□□ -0.02
PCDH8-202ENST00000377942 MDFICQ9P1T7 246 aa14.92□□□□□ -0.02
PCDH8-202ENST00000377942 A0A0J9YXV3 536 aa14.92□□□□□ -0.02
PCDH8-202ENST00000377942 DEFB125Q8N687 156 aa14.91□□□□□ -0.02
PCDH8-202ENST00000377942 ZFAND3Q9H8U3 227 aa14.91□□□□□ -0.02
PCDH8-202ENST00000377942 HIVEP3Q5T1R4 2406 aa14.91□□□□□ -0.02
PCDH8-202ENST00000377942 SMIM9A6NGZ8 99 aa14.91□□□□□ -0.02
PCDH8-202ENST00000377942 EDA2RQ9HAV5 297 aa14.91□□□□□ -0.02
PCDH8-202ENST00000377942 MYO18BQ8IUG5 2567 aa14.91□□□□□ -0.02
PCDH8-202ENST00000377942 SHISA2Q6UWI4 295 aa14.9□□□□□ -0.02
PCDH8-202ENST00000377942 GAGE2AQ6NT46 116 aa14.9□□□□□ -0.02
PCDH8-202ENST00000377942 TOMM6Q96B49 74 aa14.9□□□□□ -0.02
PCDH8-202ENST00000377942 CAMK2N2Q96S95 79 aa14.89□□□□□ -0.03
PCDH8-202ENST00000377942 KLK5Q9Y337 293 aaPredicted RBP14.89□□□□□ -0.03
PCDH8-202ENST00000377942 F8W735 103 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms