RNA–Protein interactions for RNA: ENST00000377755.8

KRT40-201, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-201ENST00000377755 RNASE3P12724 160 aaKnown RBP9.43□□□□□ -0.9
KRT40-201ENST00000377755 SSTP61278 116 aa9.43□□□□□ -0.9
KRT40-201ENST00000377755 TWIST1Q15672 202 aa9.43□□□□□ -0.9
KRT40-201ENST00000377755 MRPL52Q86TS9 123 aaKnown RBP9.43□□□□□ -0.9
KRT40-201ENST00000377755 ORMDL3Q8N138 153 aa9.43□□□□□ -0.9
KRT40-201ENST00000377755 TMEM70Q9BUB7 260 aa9.43□□□□□ -0.9
KRT40-201ENST00000377755 MDFICQ9P1T7 246 aa9.43□□□□□ -0.9
KRT40-201ENST00000377755 IGHV1-24A0A0C4DH33 117 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 H3BVH4 76 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 AZU1P20160 251 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 ASIPP42127 132 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 APOC4P55056 127 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 ZNF705AQ6ZN79 300 aaPredicted RBP9.42□□□□□ -0.9
KRT40-201ENST00000377755 FA2HQ7L5A8 372 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 PRSS3P2Q8NHM4 247 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 MIEN1Q9BRT3 115 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 CNFNQ9BYD5 112 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 AP5S1Q9NUS5 200 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 HSPB8Q9UJY1 196 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 GOLT1BQ9Y3E0 138 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 TIMM8BQ9Y5J9 83 aaPredicted RBP9.42□□□□□ -0.9
KRT40-201ENST00000377755 IGHV3-16A0A0C4DH30 117 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 S100A4P26447 101 aaKnown RBP9.42□□□□□ -0.9
KRT40-201ENST00000377755 Q8N976 141 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 URB1-AS1Q96HZ7 61 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 LINC00467Q9BRT7 94 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 TMEM191AQ9H0A3 160 aa9.42□□□□□ -0.9
KRT40-201ENST00000377755 K7EIL1 84 aa9.41□□□□□ -0.9
KRT40-201ENST00000377755 PPBPP02775 128 aa9.41□□□□□ -0.9
KRT40-201ENST00000377755 SPATA45Q537H7 98 aa9.41□□□□□ -0.9
KRT40-201ENST00000377755 SMIM15Q7Z3B0 74 aa9.41□□□□□ -0.9
KRT40-201ENST00000377755 MAP1LC3CQ9BXW4 147 aa9.41□□□□□ -0.9
KRT40-201ENST00000377755 U3KQK5 164 aa9.41□□□□□ -0.9
KRT40-201ENST00000377755 TRGV11A0A075B6L2 103 aa9.4□□□□□ -0.9
KRT40-201ENST00000377755 D6R8Y8 96 aa9.4□□□□□ -0.9
KRT40-201ENST00000377755 SNAI2O43623 268 aa9.4□□□□□ -0.9
KRT40-201ENST00000377755 DEFB135Q30KP9 77 aa9.4□□□□□ -0.9
KRT40-201ENST00000377755 OR10AG1Q8NH19 301 aa9.4□□□□□ -0.9
KRT40-201ENST00000377755 PRELID3AQ96N28 172 aa9.4□□□□□ -0.9
KRT40-201ENST00000377755 LAMTOR2Q9Y2Q5 125 aa9.4□□□□□ -0.9
KRT40-201ENST00000377755 M0R143 59 aa9.4□□□□□ -0.91
KRT40-201ENST00000377755 CKS2P33552 79 aa9.4□□□□□ -0.91
KRT40-201ENST00000377755 SCRT2Q9NQ03 307 aa9.4□□□□□ -0.91
KRT40-201ENST00000377755 AMN1Q8IY45 258 aa9.39□□□□□ -0.91
KRT40-201ENST00000377755 C11orf72Q8NBR9 251 aa9.39□□□□□ -0.91
KRT40-201ENST00000377755 C9orf85Q96MD7 179 aa9.39□□□□□ -0.91
KRT40-201ENST00000377755 C2orf88Q9BSF0 95 aa9.39□□□□□ -0.91
KRT40-201ENST00000377755 MSRB1Q9NZV6 116 aa9.39□□□□□ -0.91
KRT40-201ENST00000377755 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
KRT40-201ENST00000377755 CACNG7P62955 275 aa9.38□□□□□ -0.91
KRT40-201ENST00000377755 MRPL51Q4U2R6 128 aaKnown RBP9.38□□□□□ -0.91
KRT40-201ENST00000377755 PET117Q6UWS5 81 aa9.38□□□□□ -0.91
KRT40-201ENST00000377755 NBEAL2Q6ZNJ1 2754 aa9.38□□□□□ -0.91
KRT40-201ENST00000377755 RNASE8Q8TDE3 154 aaKnown RBP9.38□□□□□ -0.91
KRT40-201ENST00000377755 UQCR10Q9UDW1 63 aa9.38□□□□□ -0.91
KRT40-201ENST00000377755 PHLDA3Q9Y5J5 127 aa9.38□□□□□ -0.91
KRT40-201ENST00000377755 X6R8D5 127 aa9.38□□□□□ -0.91
KRT40-201ENST00000377755 MUC4Q99102 2169 aa9.38□□□□□ -0.91
KRT40-201ENST00000377755 TRAV9-2A0A087WT02 112 aa9.38□□□□□ -0.91
KRT40-201ENST00000377755 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
KRT40-201ENST00000377755 M0R381 172 aa9.37□□□□□ -0.91
KRT40-201ENST00000377755 RRN3P1Q2M238 152 aa9.37□□□□□ -0.91
KRT40-201ENST00000377755 DEFB121Q5J5C9 76 aa9.37□□□□□ -0.91
KRT40-201ENST00000377755 SPANXN1Q5VSR9 72 aa9.37□□□□□ -0.91
KRT40-201ENST00000377755 TMEM263Q8WUH6 116 aaKnown RBP9.37□□□□□ -0.91
KRT40-201ENST00000377755 IGHV4-4A0A075B6R2 117 aa9.36□□□□□ -0.91
KRT40-201ENST00000377755 HSBP1L1C9JCN9 74 aa9.36□□□□□ -0.91
KRT40-201ENST00000377755 ZNF415Q09FC8 603 aa9.36□□□□□ -0.91
KRT40-201ENST00000377755 RNF183Q96D59 192 aa9.36□□□□□ -0.91
KRT40-201ENST00000377755 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
KRT40-201ENST00000377755 OR11H2Q8NH07 326 aa9.35□□□□□ -0.91
KRT40-201ENST00000377755 MAP1LC3AQ9H492 121 aa9.35□□□□□ -0.91
KRT40-201ENST00000377755 IGLC3P0DOY3 106 aa9.35□□□□□ -0.91
KRT40-201ENST00000377755 IFI27P40305 119 aaPredicted RBP9.35□□□□□ -0.91
KRT40-201ENST00000377755 SBSPONQ8IVN8 264 aa9.35□□□□□ -0.91
KRT40-201ENST00000377755 C16orf74Q96GX8 76 aa9.35□□□□□ -0.91
KRT40-201ENST00000377755 NXT2Q9NPJ8 142 aaKnown RBP9.35□□□□□ -0.91
KRT40-201ENST00000377755 LOC389332A0A1B0GUA5 103 aa9.34□□□□□ -0.91
KRT40-201ENST00000377755 NXPH4O95158 308 aa9.34□□□□□ -0.91
KRT40-201ENST00000377755 SPATA12Q7Z6I5 190 aa9.34□□□□□ -0.91
KRT40-201ENST00000377755 IL17DQ8TAD2 202 aa9.34□□□□□ -0.91
KRT40-201ENST00000377755 RETNQ9HD89 108 aa9.34□□□□□ -0.91
KRT40-201ENST00000377755 SMIM9A6NGZ8 99 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 HBDP02042 147 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 ZNF876PQ49A33 203 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 ATOH7Q8N100 152 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 OVOL2Q9BRP0 275 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 JPT2Q9H910 190 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 ST20Q9HBF5 79 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 M0R2P5 195 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 EVI2AP22794 236 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 HNRNPA3P51991 378 aaKnown RBP9.33□□□□□ -0.92
KRT40-201ENST00000377755 EMP1P54849 157 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 MRAPQ8TCY5 172 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 RNF185Q96GF1 192 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 SPXQ9BT56 116 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 SNHG12Q9BXW3 62 aa9.33□□□□□ -0.92
KRT40-201ENST00000377755 NOP10Q9NPE3 64 aaKnown RBP9.33□□□□□ -0.92
KRT40-201ENST00000377755 MRPL16Q9NX20 251 aaKnown RBP9.33□□□□□ -0.92
KRT40-201ENST00000377755 NPYP01303 97 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms