RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TPT1P13693 172 aaKnown RBP12.85□□□□□ -0.35
CBWD3-204ENST00000377349 GCSHP23434 173 aa12.85□□□□□ -0.35
CBWD3-204ENST00000377349 TIRAPP58753 221 aa12.85□□□□□ -0.35
CBWD3-204ENST00000377349 A0A087WWL8 130 aa12.84□□□□□ -0.35
CBWD3-204ENST00000377349 A0A0D9SG52 128 aa12.84□□□□□ -0.35
CBWD3-204ENST00000377349 LRCOL1A6NCL2 159 aa12.84□□□□□ -0.35
CBWD3-204ENST00000377349 SEC11BP0C7V7 166 aa12.84□□□□□ -0.35
CBWD3-204ENST00000377349 HAMPP81172 84 aa12.84□□□□□ -0.35
CBWD3-204ENST00000377349 LINC01556Q5JQF7 62 aa12.84□□□□□ -0.35
CBWD3-204ENST00000377349 LELP1Q5T871 98 aa12.84□□□□□ -0.35
CBWD3-204ENST00000377349 ZFP2Q6ZN57 461 aa12.84□□□□□ -0.35
CBWD3-204ENST00000377349 C14orf178Q8N769 122 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-204ENST00000377349 SCO2A0A1W2PP80 73 aa12.83□□□□□ -0.36
CBWD3-204ENST00000377349 UMAD1C9J7I0 102 aa12.83□□□□□ -0.36
CBWD3-204ENST00000377349 LTAP01374 205 aa12.83□□□□□ -0.36
CBWD3-204ENST00000377349 TCEAL7Q9BRU2 100 aa12.83□□□□□ -0.36
CBWD3-204ENST00000377349 HMSDA8MTL9 139 aa12.82□□□□□ -0.36
CBWD3-204ENST00000377349 PRR27Q6MZM9 219 aa12.82□□□□□ -0.36
CBWD3-204ENST00000377349 H2AFB1P0C5Y9 115 aa12.81□□□□□ -0.36
CBWD3-204ENST00000377349 ZNF674Q2M3X9 581 aa12.81□□□□□ -0.36
CBWD3-204ENST00000377349 Q8N3U1 123 aa12.81□□□□□ -0.36
CBWD3-204ENST00000377349 Q9UF83 564 aa12.81□□□□□ -0.36
CBWD3-204ENST00000377349 RHODO00212 210 aa12.8□□□□□ -0.36
CBWD3-204ENST00000377349 EIF5AP63241 154 aaKnown RBP12.8□□□□□ -0.36
CBWD3-204ENST00000377349 RPL19P84098 196 aaKnown RBP12.8□□□□□ -0.36
CBWD3-204ENST00000377349 LINC01559Q495D7 138 aa12.8□□□□□ -0.36
CBWD3-204ENST00000377349 TMUB2Q71RG4 321 aa12.8□□□□□ -0.36
CBWD3-204ENST00000377349 IBA57-AS1B1ANH7 110 aa12.79□□□□□ -0.36
CBWD3-204ENST00000377349 SSTP61278 116 aa12.79□□□□□ -0.36
CBWD3-204ENST00000377349 PIK3CD-AS1Q5SR53 167 aa12.79□□□□□ -0.36
CBWD3-204ENST00000377349 ZFP82Q8N141 532 aa12.79□□□□□ -0.36
CBWD3-204ENST00000377349 MBD3L1Q8WWY6 194 aa12.79□□□□□ -0.36
CBWD3-204ENST00000377349 TRBV6-1A0A0K0K1D8 114 aa12.79□□□□□ -0.36
CBWD3-204ENST00000377349 MUC21A0A0G2JKD1 596 aa12.78□□□□□ -0.36
CBWD3-204ENST00000377349 MUC21A0A140T8X8 626 aa12.78□□□□□ -0.36
CBWD3-204ENST00000377349 UFSP1Q6NVU6 142 aa12.78□□□□□ -0.36
CBWD3-204ENST00000377349 COX8CQ7Z4L0 72 aa12.78□□□□□ -0.36
CBWD3-204ENST00000377349 BAGE2Q86Y30 109 aa12.78□□□□□ -0.36
CBWD3-204ENST00000377349 TMEM70Q9BUB7 260 aa12.78□□□□□ -0.36
CBWD3-204ENST00000377349 GNG13Q9P2W3 67 aa12.78□□□□□ -0.36
CBWD3-204ENST00000377349 IGLV5-52A0A0A0MRZ9 124 aa12.77□□□□□ -0.37
CBWD3-204ENST00000377349 S100A9P06702 114 aaKnown RBP12.77□□□□□ -0.37
CBWD3-204ENST00000377349 DNLZQ5SXM8 178 aa12.77□□□□□ -0.37
CBWD3-204ENST00000377349 NTN5Q8WTR8 489 aaPredicted RBP12.77□□□□□ -0.37
CBWD3-204ENST00000377349 SFRP2Q96HF1 295 aa12.77□□□□□ -0.37
CBWD3-204ENST00000377349 FAM30AQ9NZY2 134 aa12.77□□□□□ -0.37
CBWD3-204ENST00000377349 URGCP-MRPS24S4R325 110 aa12.77□□□□□ -0.37
CBWD3-204ENST00000377349 LINC00694P0DN24 101 aa12.76□□□□□ -0.37
CBWD3-204ENST00000377349 ZNF56Q15929 161 aa12.76□□□□□ -0.37
CBWD3-204ENST00000377349 DAZ4Q86SG3 579 aaKnown RBP12.75□□□□□ -0.37
CBWD3-204ENST00000377349 Q8N814 137 aa12.75□□□□□ -0.37
CBWD3-204ENST00000377349 DAZ3Q9NR90 486 aaKnown RBP12.75□□□□□ -0.37
CBWD3-204ENST00000377349 A0A087WWC5 75 aa12.74□□□□□ -0.37
CBWD3-204ENST00000377349 OR10AG1Q8NH19 301 aa12.74□□□□□ -0.37
CBWD3-204ENST00000377349 LRP1Q07954 4544 aaKnown RBP12.73□□□□□ -0.37
CBWD3-204ENST00000377349 FAM229AH3BQW9 127 aa12.73□□□□□ -0.37
CBWD3-204ENST00000377349 LECT2O14960 151 aa12.73□□□□□ -0.37
CBWD3-204ENST00000377349 RPL35P42766 123 aaKnown RBP12.73□□□□□ -0.37
CBWD3-204ENST00000377349 CCL20P78556 96 aa12.73□□□□□ -0.37
CBWD3-204ENST00000377349 DERL1Q9BUN8 251 aa12.73□□□□□ -0.37
CBWD3-204ENST00000377349 MANBALQ9NQG1 85 aa12.73□□□□□ -0.37
CBWD3-204ENST00000377349 RPL36AP83881 106 aaKnown RBP12.72□□□□□ -0.37
CBWD3-204ENST00000377349 WFDC2Q14508 124 aa12.72□□□□□ -0.37
CBWD3-204ENST00000377349 LAGE3Q14657 143 aa12.72□□□□□ -0.37
CBWD3-204ENST00000377349 SPANXN1Q5VSR9 72 aa12.72□□□□□ -0.37
CBWD3-204ENST00000377349 RPL36ALQ969Q0 106 aaKnown RBP12.72□□□□□ -0.37
CBWD3-204ENST00000377349 TPPP3Q9BW30 176 aa12.72□□□□□ -0.37
CBWD3-204ENST00000377349 TM2D2Q9BX73 214 aa12.72□□□□□ -0.37
CBWD3-204ENST00000377349 F5H697 171 aa12.71□□□□□ -0.37
CBWD3-204ENST00000377349 KCNIP4Q6PIL6 250 aa12.71□□□□□ -0.37
CBWD3-204ENST00000377349 TEX46H3BTG2 121 aa12.71□□□□□ -0.38
CBWD3-204ENST00000377349 TOR2AQ5JU69 321 aa12.71□□□□□ -0.38
CBWD3-204ENST00000377349 EIF5AL1Q6IS14 154 aaKnown RBP12.71□□□□□ -0.38
CBWD3-204ENST00000377349 A0A087WX48 190 aa12.7□□□□□ -0.38
CBWD3-204ENST00000377349 TRAV8-3A0A0A6YYJ7 113 aa12.7□□□□□ -0.38
CBWD3-204ENST00000377349 CENPWQ5EE01 88 aa12.7□□□□□ -0.38
CBWD3-204ENST00000377349 MLST8Q9BVC4 326 aa12.7□□□□□ -0.38
CBWD3-204ENST00000377349 Q6ZSA8 131 aa12.69□□□□□ -0.38
CBWD3-204ENST00000377349 KLK12Q9UKR0 248 aa12.69□□□□□ -0.38
CBWD3-204ENST00000377349 FAT3Q8TDW7 4589 aa12.69□□□□□ -0.38
CBWD3-204ENST00000377349 HMCN2Q8NDA2 5059 aa12.68□□□□□ -0.38
CBWD3-204ENST00000377349 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.68□□□□□ -0.38
CBWD3-204ENST00000377349 TRBV7-3A0A075B6L6 115 aa12.68□□□□□ -0.38
CBWD3-204ENST00000377349 TRBV10-1A0A0K0K1A3 114 aa12.68□□□□□ -0.38
CBWD3-204ENST00000377349 TMEM262E9PQX1 116 aa12.68□□□□□ -0.38
CBWD3-204ENST00000377349 C1QBP02746 253 aa12.68□□□□□ -0.38
CBWD3-204ENST00000377349 SMIM17P0DL12 118 aa12.68□□□□□ -0.38
CBWD3-204ENST00000377349 GZMBP10144 247 aa12.68□□□□□ -0.38
CBWD3-204ENST00000377349 RAB5CP51148 216 aa12.68□□□□□ -0.38
CBWD3-204ENST00000377349 NIT1Q86X76 327 aa12.68□□□□□ -0.38
CBWD3-204ENST00000377349 DAZAP1Q96EP5 407 aaKnown RBP12.68□□□□□ -0.38
CBWD3-204ENST00000377349 IGKV2D-24A0A075B6R9 120 aa12.67□□□□□ -0.38
CBWD3-204ENST00000377349 RAB4BP61018 213 aa12.67□□□□□ -0.38
CBWD3-204ENST00000377349 UBE2WQ96B02 151 aa12.67□□□□□ -0.38
CBWD3-204ENST00000377349 DNAJC30Q96LL9 226 aa12.67□□□□□ -0.38
CBWD3-204ENST00000377349 RAB19A4D1S5 217 aa12.66□□□□□ -0.38
CBWD3-204ENST00000377349 IFNA1P01562 189 aa12.66□□□□□ -0.38
CBWD3-204ENST00000377349 MGPP08493 103 aa12.66□□□□□ -0.38
CBWD3-204ENST00000377349 GNG4P50150 75 aa12.66□□□□□ -0.38
CBWD3-204ENST00000377349 UBE2D3P61077 147 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms