RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 GYPEP15421 78 aa13.73□□□□□ -0.21
CLSTN1-202ENST00000377298 Q8N1Y9 231 aa13.73□□□□□ -0.21
CLSTN1-202ENST00000377298 TRBV12-3P01733 135 aa13.73□□□□□ -0.21
CLSTN1-202ENST00000377298 MED14OSP0DP75 135 aa13.73□□□□□ -0.21
CLSTN1-202ENST00000377298 Q6ZPA2 131 aa13.73□□□□□ -0.21
CLSTN1-202ENST00000377298 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.73□□□□□ -0.21
CLSTN1-202ENST00000377298 IGKV2-29A2NJV5 120 aaPredicted RBP13.73□□□□□ -0.21
CLSTN1-202ENST00000377298 UBE2BP63146 152 aa13.73□□□□□ -0.21
CLSTN1-202ENST00000377298 RNASE13Q5GAN3 156 aaKnown RBP13.73□□□□□ -0.21
CLSTN1-202ENST00000377298 DAZ2Q13117 558 aaKnown RBP13.72□□□□□ -0.21
CLSTN1-202ENST00000377298 DAZ4Q86SG3 579 aaKnown RBP13.72□□□□□ -0.21
CLSTN1-202ENST00000377298 DAZ3Q9NR90 486 aaKnown RBP13.72□□□□□ -0.21
CLSTN1-202ENST00000377298 K7EP13 123 aa13.72□□□□□ -0.21
CLSTN1-202ENST00000377298 Q6ZQT7 251 aa13.72□□□□□ -0.21
CLSTN1-202ENST00000377298 SPINK8P0C7L1 97 aa13.72□□□□□ -0.21
CLSTN1-202ENST00000377298 GATA1P15976 413 aaPredicted RBP13.72□□□□□ -0.21
CLSTN1-202ENST00000377298 BRWD1-AS2P59051 145 aa13.72□□□□□ -0.21
CLSTN1-202ENST00000377298 MED12LQ86YW9 2145 aa13.72□□□□□ -0.21
CLSTN1-202ENST00000377298 CCDC140Q96MF4 163 aa13.71□□□□□ -0.21
CLSTN1-202ENST00000377298 PKIGQ9Y2B9 76 aa13.71□□□□□ -0.21
CLSTN1-202ENST00000377298 IGKV1D-37A0A075B6S9 117 aa13.71□□□□□ -0.21
CLSTN1-202ENST00000377298 XCL1P47992 114 aa13.71□□□□□ -0.22
CLSTN1-202ENST00000377298 EBI3Q14213 229 aa13.71□□□□□ -0.22
CLSTN1-202ENST00000377298 MSRB1Q9NZV6 116 aa13.71□□□□□ -0.22
CLSTN1-202ENST00000377298 CEP192Q8TEP8 1941 aa13.71□□□□□ -0.22
CLSTN1-202ENST00000377298 K7EP34 96 aa13.7□□□□□ -0.22
CLSTN1-202ENST00000377298 RPL32P62910 135 aaKnown RBP13.7□□□□□ -0.22
CLSTN1-202ENST00000377298 TAL2Q16559 108 aa13.7□□□□□ -0.22
CLSTN1-202ENST00000377298 DKK2Q9UBU2 259 aa13.7□□□□□ -0.22
CLSTN1-202ENST00000377298 RPL39LQ96EH5 51 aaKnown RBP13.7□□□□□ -0.22
CLSTN1-202ENST00000377298 A0A0J9YX75 114 aa13.7□□□□□ -0.22
CLSTN1-202ENST00000377298 TDRG1Q3Y452 100 aa13.7□□□□□ -0.22
CLSTN1-202ENST00000377298 IGF2RP11717 2491 aa13.7□□□□□ -0.22
CLSTN1-202ENST00000377298 NAV2Q8IVL1 2488 aa13.7□□□□□ -0.22
CLSTN1-202ENST00000377298 C9JAW5 83 aa13.7□□□□□ -0.22
CLSTN1-202ENST00000377298 UTF1Q5T230 341 aa13.7□□□□□ -0.22
CLSTN1-202ENST00000377298 TRBV20-1A0A075B6N2 111 aa13.69□□□□□ -0.22
CLSTN1-202ENST00000377298 KLK5Q9Y337 293 aaPredicted RBP13.69□□□□□ -0.22
CLSTN1-202ENST00000377298 LINC01548A6NM66 108 aa13.69□□□□□ -0.22
CLSTN1-202ENST00000377298 NDUFA11Q86Y39 141 aa13.69□□□□□ -0.22
CLSTN1-202ENST00000377298 ZNF503Q96F45 646 aa13.68□□□□□ -0.22
CLSTN1-202ENST00000377298 CHD3Q12873 2000 aaKnown RBP13.68□□□□□ -0.22
CLSTN1-202ENST00000377298 TRAV13-2A0A0B4J235 113 aa13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 Q6ZVH6 145 aa13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 LY6LH3BQJ8 138 aa13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 ALPK3Q96L96 1907 aa13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 CRLF1O75462 422 aa13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 F8W735 103 aaPredicted RBP13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 HIST1H4AP62805 103 aaKnown RBP13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 DEFB135Q30KP9 77 aa13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 SLC25A29Q8N8R3 303 aa13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 A0A1W2PPM0 123 aa13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 SIVA1O15304 175 aa13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 CTRLP40313 264 aa13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 EIF4EBP1Q13541 118 aaPredicted RBP13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 ZFP2Q6ZN57 461 aa13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 GTSF1Q8WW33 167 aa13.67□□□□□ -0.22
CLSTN1-202ENST00000377298 EDA2RQ9HAV5 297 aa13.66□□□□□ -0.22
CLSTN1-202ENST00000377298 LGALS9O00182 355 aa13.66□□□□□ -0.22
CLSTN1-202ENST00000377298 NUP210LQ5VU65 1888 aa13.66□□□□□ -0.22
CLSTN1-202ENST00000377298 C1orf229Q6ZS94 237 aaPredicted RBP13.66□□□□□ -0.22
CLSTN1-202ENST00000377298 CRYGBP07316 175 aa13.65□□□□□ -0.22
CLSTN1-202ENST00000377298 PRO1854Q9UHT4 67 aa13.65□□□□□ -0.22
CLSTN1-202ENST00000377298 PCNX3Q9H6A9 2034 aa13.65□□□□□ -0.22
CLSTN1-202ENST00000377298 F8W1H4 67 aa13.65□□□□□ -0.22
CLSTN1-202ENST00000377298 ETDBQ3ZM63 59 aa13.65□□□□□ -0.22
CLSTN1-202ENST00000377298 ESM1Q9NQ30 184 aa13.65□□□□□ -0.22
CLSTN1-202ENST00000377298 BOD1L2Q8IYS8 172 aa13.65□□□□□ -0.22
CLSTN1-202ENST00000377298 MAP6D1Q9H9H5 199 aa13.65□□□□□ -0.22
CLSTN1-202ENST00000377298 SCRT2Q9NQ03 307 aa13.65□□□□□ -0.22
CLSTN1-202ENST00000377298 PRR14LQ5THK1 2151 aa13.65□□□□□ -0.22
CLSTN1-202ENST00000377298 TRBV7-3A0A075B6L6 115 aa13.65□□□□□ -0.23
CLSTN1-202ENST00000377298 HHLA3Q9XRX5 114 aa13.65□□□□□ -0.23
CLSTN1-202ENST00000377298 HERV-K104P63124 156 aa13.64□□□□□ -0.23
CLSTN1-202ENST00000377298 INAFM1C9JVW0 142 aa13.64□□□□□ -0.23
CLSTN1-202ENST00000377298 CCL25O15444 150 aa13.64□□□□□ -0.23
CLSTN1-202ENST00000377298 DEFB1P60022 68 aa13.64□□□□□ -0.23
CLSTN1-202ENST00000377298 IL17DQ8TAD2 202 aa13.64□□□□□ -0.23
CLSTN1-202ENST00000377298 DSCAMO60469 2012 aa13.64□□□□□ -0.23
CLSTN1-202ENST00000377298 DEFB125Q8N687 156 aa13.63□□□□□ -0.23
CLSTN1-202ENST00000377298 INAFM2P0DMQ5 153 aa13.63□□□□□ -0.23
CLSTN1-202ENST00000377298 CEND1Q8N111 149 aa13.63□□□□□ -0.23
CLSTN1-202ENST00000377298 TMEM263Q8WUH6 116 aaKnown RBP13.63□□□□□ -0.23
CLSTN1-202ENST00000377298 TNCP24821 2201 aa13.63□□□□□ -0.23
CLSTN1-202ENST00000377298 IGHV3-30P01768 117 aa13.63□□□□□ -0.23
CLSTN1-202ENST00000377298 IGHV3-33P01772 117 aa13.63□□□□□ -0.23
CLSTN1-202ENST00000377298 IGHV3-30-3P0DP02 117 aa13.63□□□□□ -0.23
CLSTN1-202ENST00000377298 IGHV3-30-5P0DP03 117 aa13.63□□□□□ -0.23
CLSTN1-202ENST00000377298 Q9H8V8 135 aa13.63□□□□□ -0.23
CLSTN1-202ENST00000377298 C5orf38Q86SI9 138 aa13.62□□□□□ -0.23
CLSTN1-202ENST00000377298 PTPRSQ13332 1948 aa13.62□□□□□ -0.23
CLSTN1-202ENST00000377298 FGF6P10767 208 aa13.62□□□□□ -0.23
CLSTN1-202ENST00000377298 CCDC168Q8NDH2 2452 aa13.61□□□□□ -0.23
CLSTN1-202ENST00000377298 SOCS3O14543 225 aa13.61□□□□□ -0.23
CLSTN1-202ENST00000377298 GAGE2AQ6NT46 116 aa13.61□□□□□ -0.23
CLSTN1-202ENST00000377298 AMTNQ6UX39 209 aa13.61□□□□□ -0.23
CLSTN1-202ENST00000377298 C19orf71A6NCJ1 209 aa13.6□□□□□ -0.23
CLSTN1-202ENST00000377298 ODF3Q96PU9 254 aa13.6□□□□□ -0.23
CLSTN1-202ENST00000377298 CAMK2N2Q96S95 79 aa13.6□□□□□ -0.23
CLSTN1-202ENST00000377298 DEFB4AO15263 64 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms