RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 MYO7BQ6PIF6 2116 aa5.83□□□□□ -1.48
USP48-203ENST00000374732 TRBV6-6A0A0A6YYG2 114 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 C2orf82Q6UX34 121 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 CELA1Q9UNI1 258 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 A0A0C4DFX4 3053 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 TRBV7-3A0A075B6L6 115 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 ADARB2-AS1A8MUL3 147 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 CKS2P33552 79 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 DAZAP2Q15038 168 aaPredicted RBP5.82□□□□□ -1.48
USP48-203ENST00000374732 Q6ZS46 218 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 PIGBOS1A0A0B4J2F0 54 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 TRBV10-2A0A0K0K1G8 114 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 A8MU10 97 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 WNT9BO14905 357 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 PIGYQ3MUY2 71 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 PSMG4Q5JS54 123 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 C18orf12Q96KH6 178 aa5.82□□□□□ -1.48
USP48-203ENST00000374732 MED12Q93074 2177 aa5.81□□□□□ -1.48
USP48-203ENST00000374732 IBA57-AS1B1ANH7 110 aa5.81□□□□□ -1.48
USP48-203ENST00000374732 UBE2AP49459 152 aa5.81□□□□□ -1.48
USP48-203ENST00000374732 BSPH1Q075Z2 132 aa5.81□□□□□ -1.48
USP48-203ENST00000374732 Q6ZRM9 215 aa5.81□□□□□ -1.48
USP48-203ENST00000374732 FAM216BQ8N7L0 139 aa5.81□□□□□ -1.48
USP48-203ENST00000374732 DAND5Q8N907 189 aa5.81□□□□□ -1.48
USP48-203ENST00000374732 PRR14LQ5THK1 2151 aa5.81□□□□□ -1.48
USP48-203ENST00000374732 ATP5EP56381 51 aaPredicted RBP5.81□□□□□ -1.48
USP48-203ENST00000374732 KIAA0087Q14695 138 aa5.81□□□□□ -1.48
USP48-203ENST00000374732 CYYR1Q96J86 154 aa5.81□□□□□ -1.48
USP48-203ENST00000374732 VCANP13611 3396 aa5.81□□□□□ -1.48
USP48-203ENST00000374732 E7EUB6 86 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 PRM2P04554 102 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 DEFB121Q5J5C9 76 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 FGF23Q9GZV9 251 aaPredicted RBP5.8□□□□□ -1.48
USP48-203ENST00000374732 A0A0B4J2C4 111 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 ZNF503-AS2A6NEH8 195 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 A6NN06 94 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 IGHV3-9P01782 118 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 IFI27P40305 119 aaPredicted RBP5.8□□□□□ -1.48
USP48-203ENST00000374732 F8WEM9 126 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 MFAP2P55001 183 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 SERF2P84101 59 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 ESRGQ1W209 222 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 Q6ZR03 302 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 ZNF414Q96IQ9 312 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 SLC25A22Q9H936 323 aa5.8□□□□□ -1.48
USP48-203ENST00000374732 LMO4P61968 165 aa5.79□□□□□ -1.48
USP48-203ENST00000374732 Q8IYB0 196 aa5.79□□□□□ -1.48
USP48-203ENST00000374732 C11orf52Q96A22 123 aa5.79□□□□□ -1.48
USP48-203ENST00000374732 SPRR3Q9UBC9 169 aa5.79□□□□□ -1.48
USP48-203ENST00000374732 RNF223E7ERA6 249 aa5.79□□□□□ -1.48
USP48-203ENST00000374732 UBE2D1P51668 147 aa5.79□□□□□ -1.48
USP48-203ENST00000374732 FXYD3Q14802 87 aa5.79□□□□□ -1.48
USP48-203ENST00000374732 SDIM1Q6ZPB5 146 aa5.79□□□□□ -1.48
USP48-203ENST00000374732 ZNF818PQ6ZRF7 136 aa5.79□□□□□ -1.48
USP48-203ENST00000374732 DYNLRB1Q9NP97 96 aa5.79□□□□□ -1.48
USP48-203ENST00000374732 DNAJC13O75165 2243 aa5.78□□□□□ -1.48
USP48-203ENST00000374732 ATXN8Q156A1 80 aa5.78□□□□□ -1.48
USP48-203ENST00000374732 TMEM61Q8N0U2 210 aa5.78□□□□□ -1.48
USP48-203ENST00000374732 MRPL35Q9NZE8 188 aaKnown RBP5.78□□□□□ -1.48
USP48-203ENST00000374732 TRAV13-2A0A0B4J235 113 aa5.78□□□□□ -1.48
USP48-203ENST00000374732 INAFM1C9JVW0 142 aa5.78□□□□□ -1.48
USP48-203ENST00000374732 PSPHP1O15172 72 aa5.78□□□□□ -1.48
USP48-203ENST00000374732 C2orf83Q53S99 150 aa5.78□□□□□ -1.48
USP48-203ENST00000374732 ZNF71Q9NQZ8 489 aaPredicted RBP5.78□□□□□ -1.48
USP48-203ENST00000374732 ZNF407Q9C0G0 2248 aa5.78□□□□□ -1.48
USP48-203ENST00000374732 FAM186AA6NE01 2351 aa5.78□□□□□ -1.48
USP48-203ENST00000374732 A0A087WVE0 104 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 IGHV3OR16-9A0A0B4J2B5 98 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 CTXND1A0A1B0GTU2 59 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 PRSS2P07478 247 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 NANOS2P60321 138 aaKnown RBP5.77□□□□□ -1.49
USP48-203ENST00000374732 C11orf1Q9H5F2 150 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 PSENENQ9NZ42 101 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 FXYD4P59646 89 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 C15orf32Q32M92 178 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 C18orf65Q6ZTR6 163 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 LYZL2Q7Z4W2 148 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 LINC00269Q8N2A0 174 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 OSTCQ9NRP0 149 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 CACNA1DQ01668 2161 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 IGHV4-39P01824 125 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 BRWD1-AS2P59051 145 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 REG3GQ6UW15 175 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 SVILO95425 2214 aa5.77□□□□□ -1.49
USP48-203ENST00000374732 SPEGQ15772 3267 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 ATP11AUNQ6ZP68 121 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 NDUFA11Q86Y39 141 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 IFI27L1Q96BM0 104 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 BBC3Q96PG8 261 aaPredicted RBP5.76□□□□□ -1.49
USP48-203ENST00000374732 DSCAMO60469 2012 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 MYO15AQ9UKN7 3530 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 CACNA1HO95180 2353 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 SMIM27A0A1W2PRY6 76 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 E7EQL1 145 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 IGHV1-2P23083 117 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 CXCL6P80162 114 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 HS3ST6Q96QI5 342 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 GVINP1Q7Z2Y8 2422 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 WDFY3Q8IZQ1 3526 aa5.76□□□□□ -1.49
USP48-203ENST00000374732 MUC4Q99102 2169 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms