RNA–Protein interactions for RNA: ENST00000373832.5

RCC1-202, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1, Length 2,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-202ENST00000373832 MRPL16Q9NX20 251 aaKnown RBP13.09□□□□□ -0.31
RCC1-202ENST00000373832 SDHAF1A6NFY7 115 aa13.08□□□□□ -0.32
RCC1-202ENST00000373832 SH2D6Q7Z4S9 175 aa13.08□□□□□ -0.32
RCC1-202ENST00000373832 MTURNQ8N3F0 131 aa13.08□□□□□ -0.32
RCC1-202ENST00000373832 J3QR89 54 aa13.08□□□□□ -0.32
RCC1-202ENST00000373832 ZNF688P0C7X2 276 aa13.08□□□□□ -0.32
RCC1-202ENST00000373832 ETDBQ3ZM63 59 aa13.08□□□□□ -0.32
RCC1-202ENST00000373832 PRORYQ9H606 182 aa13.08□□□□□ -0.32
RCC1-202ENST00000373832 IGKV3-20P01619 116 aa13.07□□□□□ -0.32
RCC1-202ENST00000373832 TMEM238C9JI98 176 aa13.07□□□□□ -0.32
RCC1-202ENST00000373832 TIMM17AQ99595 171 aa13.07□□□□□ -0.32
RCC1-202ENST00000373832 LGALS9O00182 355 aa13.06□□□□□ -0.32
RCC1-202ENST00000373832 TRAV12-2A0A075B6T6 113 aa13.05□□□□□ -0.32
RCC1-202ENST00000373832 IGHV3-16A0A0C4DH30 117 aa13.05□□□□□ -0.32
RCC1-202ENST00000373832 TMEM170BQ5T4T1 132 aa13.05□□□□□ -0.32
RCC1-202ENST00000373832 ZNF256Q9Y2P7 627 aaPredicted RBP13.05□□□□□ -0.32
RCC1-202ENST00000373832 TRBV27A0A0K0K1C4 114 aa13.05□□□□□ -0.32
RCC1-202ENST00000373832 AVPP01185 164 aa13.05□□□□□ -0.32
RCC1-202ENST00000373832 ZNF56Q15929 161 aa13.05□□□□□ -0.32
RCC1-202ENST00000373832 SYT8Q8NBV8 401 aa13.05□□□□□ -0.32
RCC1-202ENST00000373832 C9orf85Q96MD7 179 aa13.05□□□□□ -0.32
RCC1-202ENST00000373832 PRO0461Q9UI25 63 aa13.05□□□□□ -0.32
RCC1-202ENST00000373832 CELSR1Q9NYQ6 3014 aa13.05□□□□□ -0.32
RCC1-202ENST00000373832 PSMB8P28062 276 aa13.04□□□□□ -0.32
RCC1-202ENST00000373832 UBE2D1P51668 147 aa13.04□□□□□ -0.32
RCC1-202ENST00000373832 SNRPD3P62318 126 aaKnown RBP13.04□□□□□ -0.32
RCC1-202ENST00000373832 MDFICQ9P1T7 246 aa13.04□□□□□ -0.32
RCC1-202ENST00000373832 TSSC4Q9Y5U2 329 aaPredicted RBP13.04□□□□□ -0.32
RCC1-202ENST00000373832 SPTAN1Q13813 2472 aaKnown RBP13.04□□□□□ -0.32
RCC1-202ENST00000373832 TRBV6-5A0A0K0K1A5 114 aa13.04□□□□□ -0.32
RCC1-202ENST00000373832 ODF3Q96PU9 254 aa13.04□□□□□ -0.32
RCC1-202ENST00000373832 A0A0J9YX75 114 aa13.03□□□□□ -0.32
RCC1-202ENST00000373832 A0A0J9YY99 117 aa13.03□□□□□ -0.32
RCC1-202ENST00000373832 B4DSR2 109 aa13.03□□□□□ -0.32
RCC1-202ENST00000373832 APOMO95445 188 aa13.03□□□□□ -0.32
RCC1-202ENST00000373832 SPAG8Q99932 426 aaPredicted RBP13.03□□□□□ -0.32
RCC1-202ENST00000373832 ZNF876PQ49A33 203 aa13.02□□□□□ -0.32
RCC1-202ENST00000373832 C10orf99Q6UWK7 81 aa13.02□□□□□ -0.32
RCC1-202ENST00000373832 Q8N1Y9 231 aa13.02□□□□□ -0.32
RCC1-202ENST00000373832 DLX4Q92988 240 aaPredicted RBP13.02□□□□□ -0.32
RCC1-202ENST00000373832 SIGMAR1Q99720 223 aa13.02□□□□□ -0.32
RCC1-202ENST00000373832 LOC107984156A0A0G2JMH3 177 aa13.02□□□□□ -0.33
RCC1-202ENST00000373832 TSPAN13O95857 204 aa13.02□□□□□ -0.33
RCC1-202ENST00000373832 ARL17AQ8IVW1 177 aa13.02□□□□□ -0.33
RCC1-202ENST00000373832 ZNRF2Q8NHG8 242 aa13.02□□□□□ -0.33
RCC1-202ENST00000373832 ZNF580Q9UK33 172 aa13.02□□□□□ -0.33
RCC1-202ENST00000373832 VPS13CQ709C8 3753 aa13.01□□□□□ -0.33
RCC1-202ENST00000373832 GAGE12HA6NDE8 117 aa13.01□□□□□ -0.33
RCC1-202ENST00000373832 IGHV4-59P01825 116 aa13.01□□□□□ -0.33
RCC1-202ENST00000373832 TSPEAR-AS2P59090 65 aa13.01□□□□□ -0.33
RCC1-202ENST00000373832 SFTA2Q6UW10 78 aa13.01□□□□□ -0.33
RCC1-202ENST00000373832 GTSF1LQ9H1H1 148 aa13.01□□□□□ -0.33
RCC1-202ENST00000373832 IGHV1OR15-1A0A075B7D0 117 aa13.01□□□□□ -0.33
RCC1-202ENST00000373832 M0QY20 66 aa13.01□□□□□ -0.33
RCC1-202ENST00000373832 SPINK13Q1W4C9 94 aa13.01□□□□□ -0.33
RCC1-202ENST00000373832 AZU1P20160 251 aa13□□□□□ -0.33
RCC1-202ENST00000373832 PSMB2P49721 201 aa13□□□□□ -0.33
RCC1-202ENST00000373832 TRPT1Q86TN4 253 aaKnown RBP13□□□□□ -0.33
RCC1-202ENST00000373832 K7EQG2 157 aa13□□□□□ -0.33
RCC1-202ENST00000373832 RHOHQ15669 191 aa12.99□□□□□ -0.33
RCC1-202ENST00000373832 DEFB112Q30KQ8 113 aa12.99□□□□□ -0.33
RCC1-202ENST00000373832 J3QQQ9 107 aa12.99□□□□□ -0.33
RCC1-202ENST00000373832 LGALS3P17931 250 aaKnown RBP12.99□□□□□ -0.33
RCC1-202ENST00000373832 NSUN5P1Q3KNT7 163 aa12.99□□□□□ -0.33
RCC1-202ENST00000373832 NDUFA11Q86Y39 141 aa12.99□□□□□ -0.33
RCC1-202ENST00000373832 SLC25A29Q8N8R3 303 aa12.98□□□□□ -0.33
RCC1-202ENST00000373832 OPRPNQ99935 248 aaPredicted RBP12.98□□□□□ -0.33
RCC1-202ENST00000373832 IGHV3-30P01768 117 aa12.98□□□□□ -0.33
RCC1-202ENST00000373832 IGHV3-30-5P0DP03 117 aa12.98□□□□□ -0.33
RCC1-202ENST00000373832 SYNJ2BPP57105 145 aa12.98□□□□□ -0.33
RCC1-202ENST00000373832 CFAP126Q5VTH2 177 aa12.98□□□□□ -0.33
RCC1-202ENST00000373832 INSL3P51460 131 aa12.97□□□□□ -0.33
RCC1-202ENST00000373832 LYRM7Q5U5X0 104 aa12.97□□□□□ -0.33
RCC1-202ENST00000373832 TMEM89A2RUT3 159 aa12.97□□□□□ -0.33
RCC1-202ENST00000373832 GATA3P23771 443 aa12.97□□□□□ -0.33
RCC1-202ENST00000373832 SMAGPQ0VAQ4 97 aa12.97□□□□□ -0.33
RCC1-202ENST00000373832 NFE4Q86UQ8 179 aa12.97□□□□□ -0.33
RCC1-202ENST00000373832 NCOR2Q9Y618 2525 aa12.96□□□□□ -0.33
RCC1-202ENST00000373832 UBE2D3P61077 147 aa12.96□□□□□ -0.33
RCC1-202ENST00000373832 UBE2D2P62837 147 aa12.96□□□□□ -0.33
RCC1-202ENST00000373832 SPATA25Q9BR10 227 aa12.96□□□□□ -0.33
RCC1-202ENST00000373832 SPTBN4Q9H254 2564 aa12.96□□□□□ -0.34
RCC1-202ENST00000373832 I3L3M4 83 aa12.96□□□□□ -0.34
RCC1-202ENST00000373832 P0DMU3 169 aa12.96□□□□□ -0.34
RCC1-202ENST00000373832 FAM231AP0DMU4 169 aa12.96□□□□□ -0.34
RCC1-202ENST00000373832 FAM231CP0DMU5 169 aa12.96□□□□□ -0.34
RCC1-202ENST00000373832 CFC1BP0CG36 223 aa12.95□□□□□ -0.34
RCC1-202ENST00000373832 CFC1P0CG37 223 aa12.95□□□□□ -0.34
RCC1-202ENST00000373832 DUX5Q96PT3 197 aa12.95□□□□□ -0.34
RCC1-202ENST00000373832 AMELXQ99217 191 aa12.95□□□□□ -0.34
RCC1-202ENST00000373832 CHD8Q9HCK8 2581 aa12.95□□□□□ -0.34
RCC1-202ENST00000373832 SMCPP49901 116 aaPredicted RBP12.94□□□□□ -0.34
RCC1-202ENST00000373832 C20orf203Q8NBC4 194 aa12.94□□□□□ -0.34
RCC1-202ENST00000373832 ZNF418Q8TF45 676 aaPredicted RBP12.94□□□□□ -0.34
RCC1-202ENST00000373832 C1QTNF4Q9BXJ3 329 aa12.94□□□□□ -0.34
RCC1-202ENST00000373832 LEPROTO15243 131 aa12.94□□□□□ -0.34
RCC1-202ENST00000373832 SCGB1A1P11684 91 aa12.94□□□□□ -0.34
RCC1-202ENST00000373832 ITPR1Q14643 2758 aa12.94□□□□□ -0.34
RCC1-202ENST00000373832 TRGV11A0A075B6L2 103 aa12.93□□□□□ -0.34
RCC1-202ENST00000373832 TMEM223A0PJW6 202 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms