RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 SMAD5-AS1Q9Y6J3 95 aa5.97□□□□□ -1.45
HERC4-202ENST00000373700 ZANQ9Y493 2812 aa5.97□□□□□ -1.45
HERC4-202ENST00000373700 LGALS9BQ3B8N2 356 aa5.96□□□□□ -1.45
HERC4-202ENST00000373700 PAPPA-AS1Q5QFB9 102 aa5.96□□□□□ -1.45
HERC4-202ENST00000373700 LGALS9CQ6DKI2 356 aa5.96□□□□□ -1.45
HERC4-202ENST00000373700 GAS8-AS1O95177 125 aa5.96□□□□□ -1.46
HERC4-202ENST00000373700 APRG1Q8IVJ8 170 aa5.96□□□□□ -1.46
HERC4-202ENST00000373700 ZNF625Q96I27 306 aaPredicted RBP5.96□□□□□ -1.46
HERC4-202ENST00000373700 TEX15Q9BXT5 2789 aa5.96□□□□□ -1.46
HERC4-202ENST00000373700 IGHV4OR15-8A0A075B7B6 117 aa5.96□□□□□ -1.46
HERC4-202ENST00000373700 A0A087WW49 117 aa5.96□□□□□ -1.46
HERC4-202ENST00000373700 PLNP26678 52 aa5.96□□□□□ -1.46
HERC4-202ENST00000373700 MGAM2Q2M2H8 2515 aa5.96□□□□□ -1.46
HERC4-202ENST00000373700 MAST4O15021 2626 aa5.96□□□□□ -1.46
HERC4-202ENST00000373700 TRGV11A0A075B6L2 103 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 CCL25O15444 150 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 CDKN1BP46527 198 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 C16orf54Q6UWD8 224 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 AGRNO00468 2067 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 IGHV4-31P0DP07 118 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 SAMD13Q5VXD3 122 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 AMTNQ6UX39 209 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 TMEM190Q8WZ59 177 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 DCHS2Q6V1P9 2916 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 ADARB2-AS1A8MUL3 147 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 J3QLI3 93 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 IGHG2P01859 326 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 RPL13AP40429 203 aaKnown RBP5.95□□□□□ -1.46
HERC4-202ENST00000373700 LINC01545Q5VT33 79 aa5.95□□□□□ -1.46
HERC4-202ENST00000373700 IGHV1OR15-1A0A075B7D0 117 aa5.94□□□□□ -1.46
HERC4-202ENST00000373700 PRADC1Q9BSG0 188 aa5.94□□□□□ -1.46
HERC4-202ENST00000373700 TRAV13-1A0A0B4J241 112 aa5.94□□□□□ -1.46
HERC4-202ENST00000373700 A6NDX4 124 aa5.94□□□□□ -1.46
HERC4-202ENST00000373700 PRSS29PA6NIE9 313 aa5.94□□□□□ -1.46
HERC4-202ENST00000373700 K7EP13 123 aa5.94□□□□□ -1.46
HERC4-202ENST00000373700 EDN2P20800 178 aa5.94□□□□□ -1.46
HERC4-202ENST00000373700 RPL39P62891 51 aaKnown RBP5.94□□□□□ -1.46
HERC4-202ENST00000373700 SPATA12Q7Z6I5 190 aa5.94□□□□□ -1.46
HERC4-202ENST00000373700 PGPEP1Q9NXJ5 209 aa5.94□□□□□ -1.46
HERC4-202ENST00000373700 TRGV4A0A0C4DH28 118 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 LINC01619G3V211 115 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 MRGPRG-AS1Q2M3A8 158 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 LINC01559Q495D7 138 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 F8VRH5 84 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 COX6CP09669 75 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 C18orf65Q6ZTR6 163 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 C20orf173Q96LM9 149 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 ZFAND3Q9H8U3 227 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 COL27A1Q8IZC6 1860 aaPredicted RBP5.93□□□□□ -1.46
HERC4-202ENST00000373700 DEFB130BP0DP73 79 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 DEFB130AP0DP74 79 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 CTRLP40313 264 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 CST9LQ9H4G1 147 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 ITPR2Q14571 2701 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 CIRBPQ14011 172 aaKnown RBP5.93□□□□□ -1.46
HERC4-202ENST00000373700 MRPL52Q86TS9 123 aaKnown RBP5.93□□□□□ -1.46
HERC4-202ENST00000373700 MDFICQ9P1T7 246 aa5.93□□□□□ -1.46
HERC4-202ENST00000373700 RBAKDNA6NC62 111 aa5.92□□□□□ -1.46
HERC4-202ENST00000373700 C11orf68Q9H3H3 251 aaKnown RBP5.92□□□□□ -1.46
HERC4-202ENST00000373700 SCRT2Q9NQ03 307 aa5.92□□□□□ -1.46
HERC4-202ENST00000373700 C11orf21Q9P2W6 132 aa5.92□□□□□ -1.46
HERC4-202ENST00000373700 TRBV25-1A0A075B6N4 114 aa5.92□□□□□ -1.46
HERC4-202ENST00000373700 ZNF415Q09FC8 603 aa5.92□□□□□ -1.46
HERC4-202ENST00000373700 Q8N1Y9 231 aa5.92□□□□□ -1.46
HERC4-202ENST00000373700 OR13C6PQ8NH95 151 aa5.92□□□□□ -1.46
HERC4-202ENST00000373700 CHCHD5Q9BSY4 110 aa5.92□□□□□ -1.46
HERC4-202ENST00000373700 RNASE1P07998 156 aaKnown RBP5.92□□□□□ -1.46
HERC4-202ENST00000373700 EBI3Q14213 229 aa5.92□□□□□ -1.46
HERC4-202ENST00000373700 ETDBQ3ZM63 59 aa5.92□□□□□ -1.46
HERC4-202ENST00000373700 C9orf47Q6ZRZ4 202 aa5.92□□□□□ -1.46
HERC4-202ENST00000373700 LINC01549A6NIU2 74 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 FSTL3O95633 263 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 ELANEP08246 267 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 GAGE13Q4V321 117 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 DEFB125Q8N687 156 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 URB1-AS1Q96HZ7 61 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 ZNF48Q96MX3 618 aaPredicted RBP5.91□□□□□ -1.46
HERC4-202ENST00000373700 OPRPNQ99935 248 aaPredicted RBP5.91□□□□□ -1.46
HERC4-202ENST00000373700 CITED2Q99967 270 aaPredicted RBP5.91□□□□□ -1.46
HERC4-202ENST00000373700 SMG1Q96Q15 3661 aaKnown RBP5.91□□□□□ -1.46
HERC4-202ENST00000373700 A0A087WX48 190 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 GAGE12JA6NER3 117 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 H3BMG7 143 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 CCL24O00175 119 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 LGALS1P09382 135 aaKnown RBP5.91□□□□□ -1.46
HERC4-202ENST00000373700 SMAGPQ0VAQ4 97 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 GAGE1Q13065 139 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 GAGE4Q13068 117 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 GAGE5Q13069 117 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 Q8N6K4 173 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 DNAJC9-AS1A6NH13 148 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 C9orf118A6NHY6 69 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 PRM2P04554 102 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 IGLC6P0CF74 106 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 HLA-DRB4P13762 266 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 FXYD2P54710 66 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 PMVKQ15126 192 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 SUMO4Q6EEV6 95 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 ZNRF2Q8NHG8 242 aa5.91□□□□□ -1.46
HERC4-202ENST00000373700 HLA-DRB4X5D2U9 266 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms