RNA–Protein interactions for RNA: ENST00000373573.7

HDAC8-207, Transcript of histone deacetylase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC8, Length 2,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-207ENST00000373573 SRSF9Q13242 221 aaKnown RBP eCLIP9.87□□□□□ -0.83
HDAC8-207ENST00000373573 CFAP126Q5VTH2 177 aa9.87□□□□□ -0.83
HDAC8-207ENST00000373573 ATP6V0E2Q8NHE4 81 aa9.87□□□□□ -0.83
HDAC8-207ENST00000373573 TP53TG1Q9Y2A0 90 aa9.87□□□□□ -0.83
HDAC8-207ENST00000373573 IGIPA6NJ69 53 aa9.87□□□□□ -0.83
HDAC8-207ENST00000373573 TSPAN13O95857 204 aa9.87□□□□□ -0.83
HDAC8-207ENST00000373573 CD7P09564 240 aa9.87□□□□□ -0.83
HDAC8-207ENST00000373573 POLR2KP53803 58 aaKnown RBP9.87□□□□□ -0.83
HDAC8-207ENST00000373573 HERVK_113P61574 105 aa9.87□□□□□ -0.83
HDAC8-207ENST00000373573 USMG5Q96IX5 58 aa9.87□□□□□ -0.83
HDAC8-207ENST00000373573 SETXQ7Z333 2677 aaKnown RBP9.86□□□□□ -0.83
HDAC8-207ENST00000373573 SPTAN1Q13813 2472 aaKnown RBP9.86□□□□□ -0.83
HDAC8-207ENST00000373573 H3BUA1 57 aa9.86□□□□□ -0.83
HDAC8-207ENST00000373573 APOMO95445 188 aa9.86□□□□□ -0.83
HDAC8-207ENST00000373573 SMCPP49901 116 aaPredicted RBP9.86□□□□□ -0.83
HDAC8-207ENST00000373573 RPL11P62913 178 aaKnown RBP9.86□□□□□ -0.83
HDAC8-207ENST00000373573 PMVKQ15126 192 aa9.86□□□□□ -0.83
HDAC8-207ENST00000373573 ZFP2Q6ZN57 461 aa9.86□□□□□ -0.83
HDAC8-207ENST00000373573 KLHL30-AS1Q8NEE0 82 aa9.86□□□□□ -0.83
HDAC8-207ENST00000373573 C1QTNF4Q9BXJ3 329 aa9.86□□□□□ -0.83
HDAC8-207ENST00000373573 LRRK2Q5S007 2527 aa9.86□□□□□ -0.83
HDAC8-207ENST00000373573 IGHV3OR16-10A0A075B7F0 116 aa9.85□□□□□ -0.83
HDAC8-207ENST00000373573 A0A0J9YY99 117 aa9.85□□□□□ -0.83
HDAC8-207ENST00000373573 UBE2D3P61077 147 aa9.85□□□□□ -0.83
HDAC8-207ENST00000373573 UBE2D2P62837 147 aa9.85□□□□□ -0.83
HDAC8-207ENST00000373573 TMEM141Q96I45 108 aa9.85□□□□□ -0.83
HDAC8-207ENST00000373573 SVEP1Q4LDE5 3571 aa9.85□□□□□ -0.83
HDAC8-207ENST00000373573 KLLNB2CW77 178 aa9.85□□□□□ -0.83
HDAC8-207ENST00000373573 IGHV1-69P01742 117 aa9.85□□□□□ -0.83
HDAC8-207ENST00000373573 FOXI1Q12951 378 aa9.85□□□□□ -0.83
HDAC8-207ENST00000373573 SUMO4Q6EEV6 95 aa9.85□□□□□ -0.83
HDAC8-207ENST00000373573 MUC4Q99102 2169 aa9.85□□□□□ -0.83
HDAC8-207ENST00000373573 TIMM17AQ99595 171 aa9.85□□□□□ -0.83
HDAC8-207ENST00000373573 FLNBO75369 2602 aaKnown RBP9.84□□□□□ -0.83
HDAC8-207ENST00000373573 VCYO14598 125 aa9.84□□□□□ -0.83
HDAC8-207ENST00000373573 IGHV3-11P01762 117 aa9.84□□□□□ -0.83
HDAC8-207ENST00000373573 RHPN1-AS1Q9BWJ2 59 aa9.84□□□□□ -0.83
HDAC8-207ENST00000373573 LYRM7Q5U5X0 104 aa9.83□□□□□ -0.84
HDAC8-207ENST00000373573 NDUFA11Q86Y39 141 aa9.83□□□□□ -0.84
HDAC8-207ENST00000373573 UTP20O75691 2785 aaKnown RBP9.83□□□□□ -0.84
HDAC8-207ENST00000373573 IGKV3-7A0A075B6H7 116 aa9.83□□□□□ -0.84
HDAC8-207ENST00000373573 LOC107984156A0A0G2JMH3 177 aa9.83□□□□□ -0.84
HDAC8-207ENST00000373573 IGHG2P01859 326 aa9.83□□□□□ -0.84
HDAC8-207ENST00000373573 PSMB2P49721 201 aa9.83□□□□□ -0.84
HDAC8-207ENST00000373573 EMP1P54849 157 aa9.83□□□□□ -0.84
HDAC8-207ENST00000373573 RPL39P62891 51 aaKnown RBP9.83□□□□□ -0.84
HDAC8-207ENST00000373573 FAM159AQ6UWV7 190 aa9.83□□□□□ -0.84
HDAC8-207ENST00000373573 ARL17AQ8IVW1 177 aa9.83□□□□□ -0.84
HDAC8-207ENST00000373573 KIR2DL4Q99706 377 aa9.83□□□□□ -0.84
HDAC8-207ENST00000373573 JPT2Q9H910 190 aa9.83□□□□□ -0.84
HDAC8-207ENST00000373573 IGHV4-39P01824 125 aa9.82□□□□□ -0.84
HDAC8-207ENST00000373573 BRD3OSQ6XYD6 125 aa9.82□□□□□ -0.84
HDAC8-207ENST00000373573 PIMREGQ9BSJ6 248 aa9.82□□□□□ -0.84
HDAC8-207ENST00000373573 IGHV3-30P01768 117 aa9.82□□□□□ -0.84
HDAC8-207ENST00000373573 IGHV3-30-5P0DP03 117 aa9.82□□□□□ -0.84
HDAC8-207ENST00000373573 TSPEAR-AS2P59090 65 aa9.82□□□□□ -0.84
HDAC8-207ENST00000373573 SLC25A29Q8N8R3 303 aa9.82□□□□□ -0.84
HDAC8-207ENST00000373573 WFDC12Q8WWY7 111 aa9.82□□□□□ -0.84
HDAC8-207ENST00000373573 TRBV6-5A0A0K0K1A5 114 aa9.81□□□□□ -0.84
HDAC8-207ENST00000373573 TRBV27A0A0K0K1C4 114 aa9.81□□□□□ -0.84
HDAC8-207ENST00000373573 A0A1B0GV72 72 aa9.81□□□□□ -0.84
HDAC8-207ENST00000373573 SDHAF1A6NFY7 115 aa9.81□□□□□ -0.84
HDAC8-207ENST00000373573 LGALS9O00182 355 aa9.81□□□□□ -0.84
HDAC8-207ENST00000373573 ZNF876PQ49A33 203 aa9.81□□□□□ -0.84
HDAC8-207ENST00000373573 SFTA2Q6UW10 78 aa9.81□□□□□ -0.84
HDAC8-207ENST00000373573 Q6ZS46 218 aa9.81□□□□□ -0.84
HDAC8-207ENST00000373573 NFE4Q86UQ8 179 aa9.81□□□□□ -0.84
HDAC8-207ENST00000373573 DAZ1Q9NQZ3 744 aaKnown RBP9.81□□□□□ -0.84
HDAC8-207ENST00000373573 A0A087WWL8 130 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 ID1P41134 155 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 LY6EQ16553 131 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 ZNRF2Q8NHG8 242 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 AMELXQ99217 191 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 F5H697 171 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 CFC1BP0CG36 223 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 CFC1P0CG37 223 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 TCTEX1D4Q5JR98 221 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 TMEM170BQ5T4T1 132 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 SYT8Q8NBV8 401 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 DEFB104AQ8WTQ1 72 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 CDIP1Q9H305 208 aa9.8□□□□□ -0.84
HDAC8-207ENST00000373573 ABCA2Q9BZC7 2435 aa9.79□□□□□ -0.84
HDAC8-207ENST00000373573 TRBV20-1A0A075B6N2 111 aa9.79□□□□□ -0.84
HDAC8-207ENST00000373573 A6NDX4 124 aa9.79□□□□□ -0.84
HDAC8-207ENST00000373573 TCL1BO95988 128 aa9.79□□□□□ -0.84
HDAC8-207ENST00000373573 IGLV1-40P01703 118 aa9.79□□□□□ -0.84
HDAC8-207ENST00000373573 SRD5A1P18405 259 aa9.79□□□□□ -0.84
HDAC8-207ENST00000373573 C4orf48Q5BLP8 95 aa9.79□□□□□ -0.84
HDAC8-207ENST00000373573 ZNF418Q8TF45 676 aaPredicted RBP9.79□□□□□ -0.84
HDAC8-207ENST00000373573 AKAP6Q13023 2319 aa9.79□□□□□ -0.84
HDAC8-207ENST00000373573 J3QQQ9 107 aa9.78□□□□□ -0.84
HDAC8-207ENST00000373573 K7EMT4 169 aa9.78□□□□□ -0.84
HDAC8-207ENST00000373573 SBSPONQ8IVN8 264 aa9.78□□□□□ -0.84
HDAC8-207ENST00000373573 C10orf126Q8N4M7 172 aa9.78□□□□□ -0.84
HDAC8-207ENST00000373573 DCANP1Q8TF63 244 aa9.78□□□□□ -0.84
HDAC8-207ENST00000373573 C9orf85Q96MD7 179 aa9.78□□□□□ -0.84
HDAC8-207ENST00000373573 CRYBG3Q68DQ2 2970 aa9.78□□□□□ -0.84
HDAC8-207ENST00000373573 TRAV12-3A0A0B4J271 114 aa9.78□□□□□ -0.84
HDAC8-207ENST00000373573 TEN1Q86WV5 123 aa9.78□□□□□ -0.84
HDAC8-207ENST00000373573 C10orf105Q8TEF2 133 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms