RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 MRPL18Q9H0U6 180 aaKnown RBP13.12□□□□□ -0.31
CDX4-201ENST00000373514 NACAE9PAV3 2078 aa13.11□□□□□ -0.31
CDX4-201ENST00000373514 TRAV10A0A0B4J240 114 aa13.11□□□□□ -0.31
CDX4-201ENST00000373514 A0A1B0GW15 77 aa13.11□□□□□ -0.31
CDX4-201ENST00000373514 NUPR2A6NF83 97 aa13.11□□□□□ -0.31
CDX4-201ENST00000373514 HLA-DQA1P01909 254 aa13.11□□□□□ -0.31
CDX4-201ENST00000373514 MT-ND6P03923 174 aa13.11□□□□□ -0.31
CDX4-201ENST00000373514 RAB5BP61020 215 aa13.11□□□□□ -0.31
CDX4-201ENST00000373514 CEMP1Q6PRD7 247 aaPredicted RBP13.11□□□□□ -0.31
CDX4-201ENST00000373514 ZFP82Q8N141 532 aa13.11□□□□□ -0.31
CDX4-201ENST00000373514 OR10AG1Q8NH19 301 aa13.11□□□□□ -0.31
CDX4-201ENST00000373514 DEFB131BA0A096LNP1 70 aa13.1□□□□□ -0.31
CDX4-201ENST00000373514 S100A8P05109 93 aa13.1□□□□□ -0.31
CDX4-201ENST00000373514 NTF3P20783 257 aa13.1□□□□□ -0.31
CDX4-201ENST00000373514 TWIST1Q15672 202 aa13.1□□□□□ -0.31
CDX4-201ENST00000373514 SCRT2Q9NQ03 307 aa13.1□□□□□ -0.31
CDX4-201ENST00000373514 TENM2Q9NT68 2774 aa13.1□□□□□ -0.31
CDX4-201ENST00000373514 CACNG7P62955 275 aa13.09□□□□□ -0.31
CDX4-201ENST00000373514 SPANXN1Q5VSR9 72 aa13.08□□□□□ -0.31
CDX4-201ENST00000373514 GATD1Q8NB37 220 aa13.08□□□□□ -0.31
CDX4-201ENST00000373514 C9orf85Q96MD7 179 aa13.08□□□□□ -0.31
CDX4-201ENST00000373514 MSRB1Q9NZV6 116 aa13.08□□□□□ -0.31
CDX4-201ENST00000373514 PHLDA3Q9Y5J5 127 aa13.08□□□□□ -0.31
CDX4-201ENST00000373514 IGHV4-4A0A075B6R2 117 aa13.08□□□□□ -0.32
CDX4-201ENST00000373514 APCSP02743 223 aa13.08□□□□□ -0.32
CDX4-201ENST00000373514 TRGC1P0CF51 173 aa13.08□□□□□ -0.32
CDX4-201ENST00000373514 SLAQ13239 276 aa13.08□□□□□ -0.32
CDX4-201ENST00000373514 DYNC2H1Q8NCM8 4307 aaKnown RBP13.07□□□□□ -0.32
CDX4-201ENST00000373514 TRGV2A0A075B6R0 118 aa13.06□□□□□ -0.32
CDX4-201ENST00000373514 IGLL5B9A064 214 aa13.06□□□□□ -0.32
CDX4-201ENST00000373514 M0R381 172 aa13.06□□□□□ -0.32
CDX4-201ENST00000373514 ATP5G1P05496 136 aa13.06□□□□□ -0.32
CDX4-201ENST00000373514 KIAA1644Q3SXP7 199 aa13.06□□□□□ -0.32
CDX4-201ENST00000373514 SPXQ9BT56 116 aa13.06□□□□□ -0.32
CDX4-201ENST00000373514 HIST1H2BKO60814 126 aa13.05□□□□□ -0.32
CDX4-201ENST00000373514 IGHV3-53P01767 116 aa13.05□□□□□ -0.32
CDX4-201ENST00000373514 HIST1H2BJP06899 126 aa13.05□□□□□ -0.32
CDX4-201ENST00000373514 HIST1H2BOP23527 126 aa13.05□□□□□ -0.32
CDX4-201ENST00000373514 HIST1H2BBP33778 126 aa13.05□□□□□ -0.32
CDX4-201ENST00000373514 HIST1H2BDP58876 126 aa13.05□□□□□ -0.32
CDX4-201ENST00000373514 HIST1H2BCP62807 126 aa13.05□□□□□ -0.32
CDX4-201ENST00000373514 HIST2H2BEQ16778 126 aa13.05□□□□□ -0.32
CDX4-201ENST00000373514 LGALS9BQ3B8N2 356 aa13.05□□□□□ -0.32
CDX4-201ENST00000373514 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.05□□□□□ -0.32
CDX4-201ENST00000373514 HIST1H2BHQ93079 126 aa13.05□□□□□ -0.32
CDX4-201ENST00000373514 HIST1H2BNQ99877 126 aa13.05□□□□□ -0.32
CDX4-201ENST00000373514 HIST1H2BMQ99879 126 aa13.05□□□□□ -0.32
CDX4-201ENST00000373514 M0R2P5 195 aa13.04□□□□□ -0.32
CDX4-201ENST00000373514 HOXA5P20719 270 aa13.04□□□□□ -0.32
CDX4-201ENST00000373514 TMEM191AQ9H0A3 160 aa13.04□□□□□ -0.32
CDX4-201ENST00000373514 KLK5Q9Y337 293 aaPredicted RBP13.04□□□□□ -0.32
CDX4-201ENST00000373514 F5H768 121 aa13.03□□□□□ -0.32
CDX4-201ENST00000373514 NXPH4O95158 308 aa13.03□□□□□ -0.32
CDX4-201ENST00000373514 DMRTA1Q5VZB9 504 aa13.03□□□□□ -0.32
CDX4-201ENST00000373514 RASL10AQ92737 203 aa13.03□□□□□ -0.32
CDX4-201ENST00000373514 PLECQ15149 4684 aaKnown RBP13.02□□□□□ -0.33
CDX4-201ENST00000373514 FAM104BQ5XKR9 115 aa13.02□□□□□ -0.33
CDX4-201ENST00000373514 SMIM15Q7Z3B0 74 aa13.02□□□□□ -0.33
CDX4-201ENST00000373514 AMN1Q8IY45 258 aa13.02□□□□□ -0.33
CDX4-201ENST00000373514 C18orf15Q96N68 181 aa13.02□□□□□ -0.33
CDX4-201ENST00000373514 EVI2AP22794 236 aa13.01□□□□□ -0.33
CDX4-201ENST00000373514 ZNF876PQ49A33 203 aa13.01□□□□□ -0.33
CDX4-201ENST00000373514 POM121L12Q8N7R1 296 aa13.01□□□□□ -0.33
CDX4-201ENST00000373514 SYT8Q8NBV8 401 aa13.01□□□□□ -0.33
CDX4-201ENST00000373514 ZNF479Q96JC4 524 aa13.01□□□□□ -0.33
CDX4-201ENST00000373514 APLNQ9ULZ1 77 aa13□□□□□ -0.33
CDX4-201ENST00000373514 SRIP30626 198 aa12.99□□□□□ -0.33
CDX4-201ENST00000373514 RNF185Q96GF1 192 aa12.99□□□□□ -0.33
CDX4-201ENST00000373514 AP1S3Q96PC3 154 aa12.99□□□□□ -0.33
CDX4-201ENST00000373514 A0A0J9YY99 117 aa12.98□□□□□ -0.33
CDX4-201ENST00000373514 S100A6P06703 90 aa12.98□□□□□ -0.33
CDX4-201ENST00000373514 RAB4AP20338 218 aa12.98□□□□□ -0.33
CDX4-201ENST00000373514 NDUFA6P56556 154 aa12.98□□□□□ -0.33
CDX4-201ENST00000373514 MRPL51Q4U2R6 128 aaKnown RBP12.98□□□□□ -0.33
CDX4-201ENST00000373514 JPT2Q9H910 190 aa12.98□□□□□ -0.33
CDX4-201ENST00000373514 TRAV4A0A0B4J268 109 aa12.98□□□□□ -0.33
CDX4-201ENST00000373514 C14orf178Q8N769 122 aaPredicted RBP12.98□□□□□ -0.33
CDX4-201ENST00000373514 ALKBH7Q9BT30 221 aaPredicted RBP12.98□□□□□ -0.33
CDX4-201ENST00000373514 TRAV26-1A0A087WT03 109 aa12.97□□□□□ -0.33
CDX4-201ENST00000373514 OR4C5Q8NGB2 326 aa12.97□□□□□ -0.33
CDX4-201ENST00000373514 NDUFAF3Q9BU61 184 aa12.97□□□□□ -0.33
CDX4-201ENST00000373514 DPH3P1Q9H4G8 78 aa12.97□□□□□ -0.33
CDX4-201ENST00000373514 FHL2Q14192 279 aa12.96□□□□□ -0.33
CDX4-201ENST00000373514 CFAP126Q5VTH2 177 aa12.96□□□□□ -0.33
CDX4-201ENST00000373514 PTH2Q96A98 100 aa12.96□□□□□ -0.33
CDX4-201ENST00000373514 ALMS1Q8TCU4 4167 aa12.96□□□□□ -0.34
CDX4-201ENST00000373514 IGHV3-73A0A0B4J1V6 119 aa12.95□□□□□ -0.34
CDX4-201ENST00000373514 D6R8Y8 96 aa12.95□□□□□ -0.34
CDX4-201ENST00000373514 RS1O15537 224 aa12.95□□□□□ -0.34
CDX4-201ENST00000373514 LYSTQ99698 3801 aa12.95□□□□□ -0.34
CDX4-201ENST00000373514 TRGV4A0A0C4DH28 118 aa12.94□□□□□ -0.34
CDX4-201ENST00000373514 SMKR1H3BMG3 65 aa12.94□□□□□ -0.34
CDX4-201ENST00000373514 SMIM17P0DL12 118 aa12.94□□□□□ -0.34
CDX4-201ENST00000373514 CKS2P33552 79 aa12.94□□□□□ -0.34
CDX4-201ENST00000373514 SNRPEP62304 92 aaKnown RBP12.94□□□□□ -0.34
CDX4-201ENST00000373514 VSIG2Q96IQ7 327 aa12.94□□□□□ -0.34
CDX4-201ENST00000373514 SAMD10Q9BYL1 202 aa12.94□□□□□ -0.34
CDX4-201ENST00000373514 KIF25-AS1Q9Y6Z4 181 aa12.94□□□□□ -0.34
CDX4-201ENST00000373514 KMT2CQ8NEZ4 4911 aaKnown RBP12.94□□□□□ -0.34
CDX4-201ENST00000373514 A0A087WWL8 130 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms